RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 RFNGQ9Y644 331 aa2.77□□□□□ -1.97
U1.39-201ENST00000621562 TMEM56-RWDD3S4R434 201 aa2.77□□□□□ -1.97
U1.39-201ENST00000621562 PTPRQQ9UMZ3 2332 aa2.77□□□□□ -1.97
U1.39-201ENST00000621562 CFAP47Q6ZTR5 3102 aa2.77□□□□□ -1.97
U1.39-201ENST00000621562 LAMA5O15230 3695 aa2.77□□□□□ -1.97
U1.39-201ENST00000621562 ABCA4P78363 2273 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 TRAV24A0A0B4J272 114 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 A0A1W2PPE3 182 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 DUXBA0A1W2PPF3 345 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 ZNF98A6NK75 572 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 CCDC85CA6NKD9 419 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 ZNF850A8MQ14 1090 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 ZNF724A8MTY0 619 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 ZNF732B4DXR9 585 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 C9orf172C9J069 976 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 NPIPB11E5RHQ5 1161 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 C3orf80F5H4A9 247 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 NME2P1O60361 137 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 TSPAN9O75954 239 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 CDS2O95674 445 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 IFNA21P01568 189 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 IGKV1-39P01597 117 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 IGKV1D-39P04432 117 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 P04436 131 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 CFIP05156 583 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 SERPINA7P05543 415 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 KLK3P07288 261 aaPredicted RBP2.76□□□□□ -1.97
U1.39-201ENST00000621562 ACAA1P09110 424 aaPredicted RBP2.76□□□□□ -1.97
U1.39-201ENST00000621562 ZNF883P0CG24 379 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 CEACAM1P13688 526 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 PVALBP20472 110 aaPredicted RBP2.76□□□□□ -1.97
U1.39-201ENST00000621562 AGAP20933 346 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 GDF1P27539 372 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 DUSP1P28562 367 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 GNRHRP30968 328 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 OTX2P32243 289 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 CD80P33681 288 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 MAS1LP35410 378 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 WNT5AP41221 380 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 HOXA1P49639 335 aaPredicted RBP2.76□□□□□ -1.97
U1.39-201ENST00000621562 FHITP49789 147 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 RAB13P51153 203 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 DUSP3P51452 185 aaPredicted RBP2.76□□□□□ -1.97
U1.39-201ENST00000621562 PAX9P55771 341 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 FXYD4P59646 89 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 FGF12P61328 243 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 PCBD1P61457 104 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 HERV-K104P61576 105 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 EIF5AP63241 154 aaKnown RBP2.76□□□□□ -1.97
U1.39-201ENST00000621562 HLA-DRB3P79483 266 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 ZXDAP98168 799 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 NHLH2Q02577 135 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 SMCO1Q147U7 214 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 PDCD1Q15116 288 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 PEA15Q15121 130 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 GUK1Q16774 197 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 MIDNQ504T8 468 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 PHLDA2Q53GA4 152 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 AWAT1Q58HT5 328 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 GPR157Q5UAW9 335 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 ZNF324BQ6AW86 544 aaPredicted RBP2.76□□□□□ -1.97
U1.39-201ENST00000621562 Q6P435 159 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 FBXW12Q6X9E4 464 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 C20orf204Q6ZNR8 217 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 ZNF818PQ6ZRF7 136 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 SLC25A26Q70HW3 274 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 WDR86Q86TI4 376 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 HAPLN4Q86UW8 402 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 MYPOPQ86VE0 399 aaPredicted RBP2.76□□□□□ -1.97
U1.39-201ENST00000621562 FAM185AQ8N0U4 392 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 LGI3Q8N145 548 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 BATF2Q8N1L9 274 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 GAPTQ8N292 157 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 SLC35G3Q8N808 338 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 CCDC71LQ8N9Z2 235 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 OR8G5Q8NG78 346 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 OR14L1PQ8NHC6 308 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 SECTM1Q8WVN6 248 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 GTF3AQ92664 365 aaKnown RBP2.76□□□□□ -1.97
U1.39-201ENST00000621562 CPNE4Q96A23 557 aaPredicted RBP2.76□□□□□ -1.97
U1.39-201ENST00000621562 SLAMF9Q96A28 289 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 MALSU1Q96EH3 234 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 KIRREL1Q96J84 757 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 POM121L2Q96KW2 1035 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 JSRP1Q96MG2 331 aaPredicted RBP2.76□□□□□ -1.97
U1.39-201ENST00000621562 CLCC1Q96S66 551 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 S100A13Q99584 98 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 ABHD14AQ9BUJ0 271 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 SMOC1Q9H4F8 434 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 IFT22Q9H7X7 185 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 C19orf12Q9NSK7 152 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 LYRM2Q9NU23 88 aaPredicted RBP2.76□□□□□ -1.97
U1.39-201ENST00000621562 PARPBPQ9NWS1 579 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 P4HTMQ9NXG6 502 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 MTCH1Q9NZJ7 389 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 FOXJ2Q9P0K8 574 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 GSKIPQ9P0R6 139 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 STRAPQ9Y3F4 350 aaKnown RBP2.76□□□□□ -1.97
U1.39-201ENST00000621562 TMED3Q9Y3Q3 217 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 LIPGQ9Y5X9 500 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms