RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 CST11Q9H112 138 aa11.73□□□□□ -0.53
CBWD3-217ENST00000621474 STEAP1Q9UHE8 339 aa11.73□□□□□ -0.53
CBWD3-217ENST00000621474 SOX21Q9Y651 276 aaPredicted RBP11.73□□□□□ -0.53
CBWD3-217ENST00000621474 A0A0B4J203 849 aa11.72□□□□□ -0.53
CBWD3-217ENST00000621474 FAM90A10PA6NDY2 464 aa11.72□□□□□ -0.53
CBWD3-217ENST00000621474 FAM90A18PA6NE21 464 aa11.72□□□□□ -0.53
CBWD3-217ENST00000621474 FAM90A16PA6NEW6 464 aa11.72□□□□□ -0.53
CBWD3-217ENST00000621474 FAM90A20PA6NIJ5 464 aa11.72□□□□□ -0.53
CBWD3-217ENST00000621474 FAM90A8PA6NJQ4 464 aa11.72□□□□□ -0.53
CBWD3-217ENST00000621474 FAM90A7PA6NKC0 464 aa11.72□□□□□ -0.53
CBWD3-217ENST00000621474 FAM90A22PA8MWA6 464 aa11.72□□□□□ -0.53
CBWD3-217ENST00000621474 FAM90A12PA8MX19 464 aa11.72□□□□□ -0.53
CBWD3-217ENST00000621474 FAM90A5PA8MXJ8 464 aa11.72□□□□□ -0.53
CBWD3-217ENST00000621474 FAM90A23PA8MXZ1 464 aa11.72□□□□□ -0.53
CBWD3-217ENST00000621474 RNASEK-C17orf49H0YIS7 233 aa11.72□□□□□ -0.53
CBWD3-217ENST00000621474 AIPO00170 330 aa11.72□□□□□ -0.53
CBWD3-217ENST00000621474 CLEC2LP0C7M8 214 aa11.72□□□□□ -0.53
CBWD3-217ENST00000621474 FAM90A15PP0C7V4 464 aa11.72□□□□□ -0.53
CBWD3-217ENST00000621474 FAM90A13PP0C7W8 464 aa11.72□□□□□ -0.53
CBWD3-217ENST00000621474 FAM90A14PP0C7W9 464 aa11.72□□□□□ -0.53
CBWD3-217ENST00000621474 FAM90A24PP0C7X0 464 aa11.72□□□□□ -0.53
CBWD3-217ENST00000621474 ALDH3B2P48448 385 aa11.72□□□□□ -0.53
CBWD3-217ENST00000621474 PSMD7P51665 324 aa11.72□□□□□ -0.53
CBWD3-217ENST00000621474 RPS27AP62979 156 aaKnown RBP11.72□□□□□ -0.53
CBWD3-217ENST00000621474 RAB11BQ15907 218 aa11.72□□□□□ -0.53
CBWD3-217ENST00000621474 KRBOX4Q5JUW0 171 aa11.72□□□□□ -0.53
CBWD3-217ENST00000621474 RTN4RL2Q86UN3 420 aa11.72□□□□□ -0.53
CBWD3-217ENST00000621474 BCL6BQ8N143 479 aaPredicted RBP11.72□□□□□ -0.53
CBWD3-217ENST00000621474 KCNG3Q8TAE7 436 aa11.72□□□□□ -0.53
CBWD3-217ENST00000621474 FAM3DQ96BQ1 224 aa11.72□□□□□ -0.53
CBWD3-217ENST00000621474 TMEM59Q9BXS4 323 aa11.72□□□□□ -0.53
CBWD3-217ENST00000621474 LPAR5Q9H1C0 372 aa11.72□□□□□ -0.53
CBWD3-217ENST00000621474 ING3Q9NXR8 418 aa11.72□□□□□ -0.53
CBWD3-217ENST00000621474 FBLN5Q9UBX5 448 aa11.72□□□□□ -0.53
CBWD3-217ENST00000621474 ZNF69Q9UC07 566 aa11.72□□□□□ -0.53
CBWD3-217ENST00000621474 NUP50Q9UKX7 468 aa11.72□□□□□ -0.53
CBWD3-217ENST00000621474 LINC00312Q9Y6C7 94 aa11.72□□□□□ -0.53
CBWD3-217ENST00000621474 ODAMA1E959 279 aa11.71□□□□□ -0.53
CBWD3-217ENST00000621474 C17orf98A8MV24 154 aa11.71□□□□□ -0.53
CBWD3-217ENST00000621474 AIREO43918 545 aa11.71□□□□□ -0.53
CBWD3-217ENST00000621474 SLC2A2P11168 524 aaPredicted RBP11.71□□□□□ -0.53
CBWD3-217ENST00000621474 PRTN3P24158 256 aa11.71□□□□□ -0.53
CBWD3-217ENST00000621474 KLRD1Q13241 179 aa11.71□□□□□ -0.53
CBWD3-217ENST00000621474 C2orf76Q3KRA6 126 aa11.71□□□□□ -0.53
CBWD3-217ENST00000621474 ATAD3CQ5T2N8 411 aa11.71□□□□□ -0.53
CBWD3-217ENST00000621474 BRD3OSQ6XYD6 125 aa11.71□□□□□ -0.53
CBWD3-217ENST00000621474 GDPGP1Q6ZNW5 385 aa11.71□□□□□ -0.53
CBWD3-217ENST00000621474 SLC16A12Q6ZSM3 486 aa11.71□□□□□ -0.53
CBWD3-217ENST00000621474 TPRA1Q86W33 373 aa11.71□□□□□ -0.53
CBWD3-217ENST00000621474 PDZD9Q8IXQ8 264 aa11.71□□□□□ -0.53
CBWD3-217ENST00000621474 TEX29Q8N6K0 151 aa11.71□□□□□ -0.53
CBWD3-217ENST00000621474 LHX4Q969G2 390 aa11.71□□□□□ -0.53
CBWD3-217ENST00000621474 METTL8Q9H825 291 aaKnown RBP11.71□□□□□ -0.53
CBWD3-217ENST00000621474 LIN7BQ9HAP6 207 aa11.71□□□□□ -0.53
CBWD3-217ENST00000621474 TMEM272A0A1B0GTI8 110 aa11.71□□□□□ -0.54
CBWD3-217ENST00000621474 hADV38S2A0JD32 116 aa11.71□□□□□ -0.54
CBWD3-217ENST00000621474 FOXI3A8MTJ6 420 aaPredicted RBP11.71□□□□□ -0.54
CBWD3-217ENST00000621474 NOTOA8MTQ0 251 aa11.71□□□□□ -0.54
CBWD3-217ENST00000621474 ZNF728P0DKX0 622 aa11.71□□□□□ -0.54
CBWD3-217ENST00000621474 RIPPLY3P57055 190 aa11.71□□□□□ -0.54
CBWD3-217ENST00000621474 LSM3P62310 102 aaKnown RBP11.71□□□□□ -0.54
CBWD3-217ENST00000621474 MXD1Q05195 221 aa11.71□□□□□ -0.54
CBWD3-217ENST00000621474 TIMM50Q3ZCQ8 353 aa11.71□□□□□ -0.54
CBWD3-217ENST00000621474 RUSC1-AS1Q66K80 236 aa11.71□□□□□ -0.54
CBWD3-217ENST00000621474 RAB12Q6IQ22 244 aa11.71□□□□□ -0.54
CBWD3-217ENST00000621474 C9orf139Q6ZV77 190 aa11.71□□□□□ -0.54
CBWD3-217ENST00000621474 OR2W3Q7Z3T1 314 aa11.71□□□□□ -0.54
CBWD3-217ENST00000621474 CMTM4Q8IZR5 234 aa11.71□□□□□ -0.54
CBWD3-217ENST00000621474 PIP4P2Q8N4L2 257 aa11.71□□□□□ -0.54
CBWD3-217ENST00000621474 CORO2AQ92828 525 aa11.71□□□□□ -0.54
CBWD3-217ENST00000621474 ZNF714Q96N38 554 aa11.71□□□□□ -0.54
CBWD3-217ENST00000621474 NAA50Q9GZZ1 169 aaKnown RBP11.71□□□□□ -0.54
CBWD3-217ENST00000621474 KIF25Q9UIL4 384 aa11.71□□□□□ -0.54
CBWD3-217ENST00000621474 MMP23AO75900 390 aa11.7□□□□□ -0.54
CBWD3-217ENST00000621474 CGB3P0DN86 165 aa11.7□□□□□ -0.54
CBWD3-217ENST00000621474 CGB7P0DN87 165 aa11.7□□□□□ -0.54
CBWD3-217ENST00000621474 CHATP28329 748 aa11.7□□□□□ -0.54
CBWD3-217ENST00000621474 KCNJ3P48549 501 aa11.7□□□□□ -0.54
CBWD3-217ENST00000621474 EFNB2P52799 333 aa11.7□□□□□ -0.54
CBWD3-217ENST00000621474 GPR157Q5UAW9 335 aa11.7□□□□□ -0.54
CBWD3-217ENST00000621474 SFXN4Q6P4A7 337 aa11.7□□□□□ -0.54
CBWD3-217ENST00000621474 GAPTQ8N292 157 aa11.7□□□□□ -0.54
CBWD3-217ENST00000621474 FAM89BQ8N5H3 189 aa11.7□□□□□ -0.54
CBWD3-217ENST00000621474 OR13A1Q8NGR1 328 aa11.7□□□□□ -0.54
CBWD3-217ENST00000621474 DYRK2Q92630 601 aa11.7□□□□□ -0.54
CBWD3-217ENST00000621474 ZNF48Q96MX3 618 aaPredicted RBP11.7□□□□□ -0.54
CBWD3-217ENST00000621474 SLC6A7Q99884 636 aa11.7□□□□□ -0.54
CBWD3-217ENST00000621474 NCOR1P1Q9H4R4 102 aa11.7□□□□□ -0.54
CBWD3-217ENST00000621474 UBE2J1Q9Y385 318 aaPredicted RBP11.7□□□□□ -0.54
CBWD3-217ENST00000621474 SOCS1O15524 211 aa11.69□□□□□ -0.54
CBWD3-217ENST00000621474 PDCD6O75340 191 aa11.69□□□□□ -0.54
CBWD3-217ENST00000621474 RBP4P02753 201 aa11.69□□□□□ -0.54
CBWD3-217ENST00000621474 IGHV1-8P0DP01 117 aa11.69□□□□□ -0.54
CBWD3-217ENST00000621474 FUT3P21217 361 aa11.69□□□□□ -0.54
CBWD3-217ENST00000621474 NCS1P62166 190 aa11.69□□□□□ -0.54
CBWD3-217ENST00000621474 C17orf58Q2M2W7 97 aa11.69□□□□□ -0.54
CBWD3-217ENST00000621474 ZNF782Q6ZMW2 699 aaPredicted RBP11.69□□□□□ -0.54
CBWD3-217ENST00000621474 ZNF497Q6ZNH5 498 aa11.69□□□□□ -0.54
CBWD3-217ENST00000621474 PNKDQ8N490 385 aa11.69□□□□□ -0.54
CBWD3-217ENST00000621474 BARHL1Q9BZE3 327 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms