RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 NAA50Q9GZZ1 169 aaKnown RBP7.08□□□□□ -1.28
SNCA-212ENST00000611107 FAM234AQ9H0X4 552 aa7.08□□□□□ -1.28
SNCA-212ENST00000611107 BANF2Q9H503 90 aa7.08□□□□□ -1.28
SNCA-212ENST00000611107 IFT22Q9H7X7 185 aa7.08□□□□□ -1.28
SNCA-212ENST00000611107 PLGRKTQ9HBL7 147 aa7.08□□□□□ -1.28
SNCA-212ENST00000611107 RCC2Q9P258 522 aaKnown RBP7.08□□□□□ -1.28
SNCA-212ENST00000611107 ONECUT1Q9UBC0 465 aa7.08□□□□□ -1.28
SNCA-212ENST00000611107 ST3GAL6Q9Y274 331 aa7.08□□□□□ -1.28
SNCA-212ENST00000611107 V9GY05 133 aa7.08□□□□□ -1.28
SNCA-212ENST00000611107 TRBV23-1A0A0A0MS06 115 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 A0A0A6YYD4 124 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 IFITM5A6NNB3 132 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 TMEM14DPA8MWL7 114 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 TRIM77I1YAP6 450 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 AIPO00170 330 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 HSPB6O14558 160 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 SH2D1BO14796 132 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 LDLRAD4O15165 306 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 GPR37O15354 613 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 AIREO43918 545 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 CRTAPO75718 401 aaPredicted RBP7.07□□□□□ -1.28
SNCA-212ENST00000611107 GABARAPO95166 117 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 MPIG6BO95866 241 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 ECDO95905 644 aaPredicted RBP7.07□□□□□ -1.28
SNCA-212ENST00000611107 IGHV4-59P01825 116 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 CSTBP04080 98 aaKnown RBP7.07□□□□□ -1.28
SNCA-212ENST00000611107 CSN2P05814 226 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 RNASE1P07998 156 aaKnown RBP7.07□□□□□ -1.28
SNCA-212ENST00000611107 CLEC2LP0C7M8 214 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 UBBP0CG47 229 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 HKR1P10072 659 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 GTF2F2P13984 249 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 ZNF44P15621 663 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 CCL3L1P16619 93 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 GABRR1P24046 479 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 SDC2P34741 201 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 DLX6P56179 175 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 LSM3P62310 102 aaKnown RBP7.07□□□□□ -1.28
SNCA-212ENST00000611107 PLA2G7Q13093 441 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 EDDM3AQ14507 147 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 GRK1Q15835 563 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 RAB11BQ15907 218 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 TAF9Q16594 264 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 MPV17LQ2QL34 196 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 TIMM50Q3ZCQ8 353 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 LDLRAD2Q5SZI1 272 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 UTF1Q5T230 341 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 CD276Q5ZPR3 534 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 HIST2H2BDQ6DRA6 164 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 SIGIRRQ6IA17 410 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 BAIAP2L2Q6UXY1 529 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 Q6YL49 198 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 LINC00596Q86U02 117 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 RTN4RL2Q86UN3 420 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 TPRX1Q8N7U7 411 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 CHST4Q8NCG5 386 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 ZFAND2BQ8WV99 257 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 COQ2Q96H96 371 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 SNX22Q96L94 193 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 KCTD7Q96MP8 289 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 NICN1Q9BSH3 213 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 TMEM59Q9BXS4 323 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 CHIAQ9BZP6 476 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 SELENOIQ9C0D9 397 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 CST11Q9H112 138 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 GHRLQ9UBU3 117 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 STEAP1Q9UHE8 339 aa7.07□□□□□ -1.28
SNCA-212ENST00000611107 NBEAL1Q6ZS30 2694 aa7.06□□□□□ -1.28
SNCA-212ENST00000611107 TMEM272A0A1B0GTI8 110 aa7.06□□□□□ -1.28
SNCA-212ENST00000611107 A0A1W2PQ09 198 aa7.06□□□□□ -1.28
SNCA-212ENST00000611107 PDCD5O14737 125 aa7.06□□□□□ -1.28
SNCA-212ENST00000611107 MGST3O14880 152 aa7.06□□□□□ -1.28
SNCA-212ENST00000611107 OR7C1O76099 320 aaPredicted RBP7.06□□□□□ -1.28
SNCA-212ENST00000611107 LIPFP07098 398 aa7.06□□□□□ -1.28
SNCA-212ENST00000611107 SLC2A2P11168 524 aaPredicted RBP7.06□□□□□ -1.28
SNCA-212ENST00000611107 MDKP21741 143 aaPredicted RBP7.06□□□□□ -1.28
SNCA-212ENST00000611107 P2RX3P56373 397 aa7.06□□□□□ -1.28
SNCA-212ENST00000611107 EDDM3BP56851 147 aa7.06□□□□□ -1.28
SNCA-212ENST00000611107 NCS1P62166 190 aa7.06□□□□□ -1.28
SNCA-212ENST00000611107 RPL31P62899 125 aaKnown RBP7.06□□□□□ -1.28
SNCA-212ENST00000611107 RPS27AP62979 156 aaKnown RBP7.06□□□□□ -1.28
SNCA-212ENST00000611107 PAX5Q02548 391 aa7.06□□□□□ -1.28
SNCA-212ENST00000611107 MXD1Q05195 221 aa7.06□□□□□ -1.28
SNCA-212ENST00000611107 SCN1BQ07699 218 aa7.06□□□□□ -1.28
SNCA-212ENST00000611107 GPR176Q14439 515 aa7.06□□□□□ -1.28
SNCA-212ENST00000611107 PAN3Q58A45 887 aaKnown RBP7.06□□□□□ -1.28
SNCA-212ENST00000611107 GPR157Q5UAW9 335 aa7.06□□□□□ -1.28
SNCA-212ENST00000611107 RSBN1Q5VWQ0 802 aaPredicted RBP7.06□□□□□ -1.28
SNCA-212ENST00000611107 TMEM200BQ69YZ2 307 aa7.06□□□□□ -1.28
SNCA-212ENST00000611107 SFXN4Q6P4A7 337 aa7.06□□□□□ -1.28
SNCA-212ENST00000611107 C12orf54Q6X4T0 127 aa7.06□□□□□ -1.28
SNCA-212ENST00000611107 GDPGP1Q6ZNW5 385 aa7.06□□□□□ -1.28
SNCA-212ENST00000611107 GDPD3Q7L5L3 318 aa7.06□□□□□ -1.28
SNCA-212ENST00000611107 OR2W3Q7Z3T1 314 aa7.06□□□□□ -1.28
SNCA-212ENST00000611107 FAM185AQ8N0U4 392 aa7.06□□□□□ -1.28
SNCA-212ENST00000611107 DYNAPQ8N1N2 210 aa7.06□□□□□ -1.28
SNCA-212ENST00000611107 KIR3DL3Q8N743 410 aa7.06□□□□□ -1.28
SNCA-212ENST00000611107 SUMF2Q8NBJ7 301 aa7.06□□□□□ -1.28
SNCA-212ENST00000611107 OR51D1Q8NGF3 324 aa7.06□□□□□ -1.28
SNCA-212ENST00000611107 PLPPR1Q8TBJ4 325 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms