RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 HOXB4P17483 251 aaPredicted RBP11.72□□□□□ -0.53
CTSA-219ENST00000607841 FUT3P21217 361 aa11.72□□□□□ -0.53
CTSA-219ENST00000607841 EPHA1P21709 976 aa11.72□□□□□ -0.53
CTSA-219ENST00000607841 PRTN3P24158 256 aa11.72□□□□□ -0.53
CTSA-219ENST00000607841 SDC2P34741 201 aa11.72□□□□□ -0.53
CTSA-219ENST00000607841 CLDN12P56749 244 aa11.72□□□□□ -0.53
CTSA-219ENST00000607841 RPS27AP62979 156 aaKnown RBP11.72□□□□□ -0.53
CTSA-219ENST00000607841 QRFPP83859 136 aa11.72□□□□□ -0.53
CTSA-219ENST00000607841 PAX5Q02548 391 aa11.72□□□□□ -0.53
CTSA-219ENST00000607841 GUCA2AQ02747 115 aa11.72□□□□□ -0.53
CTSA-219ENST00000607841 ZNF273Q14593 569 aa11.72□□□□□ -0.53
CTSA-219ENST00000607841 C2orf76Q3KRA6 126 aa11.72□□□□□ -0.53
CTSA-219ENST00000607841 KLF17Q5JT82 389 aaPredicted RBP11.72□□□□□ -0.53
CTSA-219ENST00000607841 OR10K2Q6IF99 312 aa11.72□□□□□ -0.53
CTSA-219ENST00000607841 RAB12Q6IQ22 244 aa11.72□□□□□ -0.53
CTSA-219ENST00000607841 TRAPPC6BQ86SZ2 158 aa11.72□□□□□ -0.53
CTSA-219ENST00000607841 TPRX1Q8N7U7 411 aa11.72□□□□□ -0.53
CTSA-219ENST00000607841 ZNF565Q8N9K5 539 aa11.72□□□□□ -0.53
CTSA-219ENST00000607841 OR51D1Q8NGF3 324 aa11.72□□□□□ -0.53
CTSA-219ENST00000607841 NEK7Q8TDX7 302 aa11.72□□□□□ -0.53
CTSA-219ENST00000607841 ZNF714Q96N38 554 aa11.72□□□□□ -0.53
CTSA-219ENST00000607841 NEDD4LQ96PU5 975 aa11.72□□□□□ -0.53
CTSA-219ENST00000607841 FUNDC2Q9BWH2 189 aa11.72□□□□□ -0.53
CTSA-219ENST00000607841 TM2D1Q9BX74 207 aa11.72□□□□□ -0.53
CTSA-219ENST00000607841 MS4A7Q9GZW8 240 aaPredicted RBP11.72□□□□□ -0.53
CTSA-219ENST00000607841 UNKLQ9H9P5 680 aaKnown RBP11.72□□□□□ -0.53
CTSA-219ENST00000607841 RCC2Q9P258 522 aaKnown RBP11.72□□□□□ -0.53
CTSA-219ENST00000607841 FBLN5Q9UBX5 448 aa11.72□□□□□ -0.53
CTSA-219ENST00000607841 PEX16Q9Y5Y5 336 aa11.72□□□□□ -0.53
CTSA-219ENST00000607841 SVEP1Q4LDE5 3571 aa11.71□□□□□ -0.53
CTSA-219ENST00000607841 MEIKINA0A087WXM9 373 aa11.71□□□□□ -0.53
CTSA-219ENST00000607841 PDCD6O75340 191 aa11.71□□□□□ -0.53
CTSA-219ENST00000607841 RBP4P02753 201 aa11.71□□□□□ -0.53
CTSA-219ENST00000607841 CCL3L1P16619 93 aa11.71□□□□□ -0.53
CTSA-219ENST00000607841 GLIPR1P48060 266 aa11.71□□□□□ -0.53
CTSA-219ENST00000607841 ERVFRD-1P60508 538 aa11.71□□□□□ -0.53
CTSA-219ENST00000607841 UNC119Q13432 240 aa11.71□□□□□ -0.53
CTSA-219ENST00000607841 SLC35E4Q6ICL7 350 aa11.71□□□□□ -0.53
CTSA-219ENST00000607841 METAP1DQ6UB28 335 aaPredicted RBP11.71□□□□□ -0.53
CTSA-219ENST00000607841 GPR141Q7Z602 305 aa11.71□□□□□ -0.53
CTSA-219ENST00000607841 Q8N7P7 452 aa11.71□□□□□ -0.53
CTSA-219ENST00000607841 CORO2AQ92828 525 aa11.71□□□□□ -0.53
CTSA-219ENST00000607841 LHX4Q969G2 390 aa11.71□□□□□ -0.53
CTSA-219ENST00000607841 COQ2Q96H96 371 aa11.71□□□□□ -0.53
CTSA-219ENST00000607841 GAL3ST2Q9H3Q3 398 aa11.71□□□□□ -0.53
CTSA-219ENST00000607841 RNF167Q9H6Y7 350 aa11.71□□□□□ -0.53
CTSA-219ENST00000607841 HEXA-AS1Q9H8Q6 139 aa11.71□□□□□ -0.53
CTSA-219ENST00000607841 LIN7BQ9HAP6 207 aa11.71□□□□□ -0.53
CTSA-219ENST00000607841 SIRT7Q9NRC8 400 aa11.71□□□□□ -0.53
CTSA-219ENST00000607841 ING3Q9NXR8 418 aa11.71□□□□□ -0.53
CTSA-219ENST00000607841 TAS2R3Q9NYW6 316 aa11.71□□□□□ -0.53
CTSA-219ENST00000607841 RAB22AQ9UL26 194 aa11.71□□□□□ -0.53
CTSA-219ENST00000607841 CENPVL3A0A0U1RRI6 287 aa11.7□□□□□ -0.54
CTSA-219ENST00000607841 TMEM30CPA0ZSE6 113 aa11.7□□□□□ -0.54
CTSA-219ENST00000607841 C17orf98A8MV24 154 aa11.7□□□□□ -0.54
CTSA-219ENST00000607841 TMEM127O75204 238 aa11.7□□□□□ -0.54
CTSA-219ENST00000607841 CA11O75493 328 aa11.7□□□□□ -0.54
CTSA-219ENST00000607841 TFAP2AP05549 437 aa11.7□□□□□ -0.54
CTSA-219ENST00000607841 IGHV4-38-2P0DP08 117 aa11.7□□□□□ -0.54
CTSA-219ENST00000607841 MXD1Q05195 221 aa11.7□□□□□ -0.54
CTSA-219ENST00000607841 RSBN1Q5VWQ0 802 aaPredicted RBP11.7□□□□□ -0.54
CTSA-219ENST00000607841 SFXN4Q6P4A7 337 aa11.7□□□□□ -0.54
CTSA-219ENST00000607841 BRICD5Q6PL45 260 aa11.7□□□□□ -0.54
CTSA-219ENST00000607841 CROCCP3Q8IVE0 287 aa11.7□□□□□ -0.54
CTSA-219ENST00000607841 DAPK2Q9UIK4 370 aa11.7□□□□□ -0.54
CTSA-219ENST00000607841 FN1P02751 2386 aaKnown RBP11.7□□□□□ -0.54
CTSA-219ENST00000607841 NIPBLQ6KC79 2804 aaeCLIP11.69□□□□□ -0.54
CTSA-219ENST00000607841 NSD1Q96L73 2696 aaPredicted RBP11.69□□□□□ -0.54
CTSA-219ENST00000607841 IGHV3OR16-10A0A075B7F0 116 aa11.69□□□□□ -0.54
CTSA-219ENST00000607841 IGHV1-69DA0A0B4J2H0 117 aa11.69□□□□□ -0.54
CTSA-219ENST00000607841 SMIM30A4D0T7 59 aa11.69□□□□□ -0.54
CTSA-219ENST00000607841 LDLRAD4O15165 306 aa11.69□□□□□ -0.54
CTSA-219ENST00000607841 IGHV1-69P01742 117 aa11.69□□□□□ -0.54
CTSA-219ENST00000607841 ALDH3B2P48448 385 aa11.69□□□□□ -0.54
CTSA-219ENST00000607841 UBE2E1P51965 193 aa11.69□□□□□ -0.54
CTSA-219ENST00000607841 DLX6P56179 175 aa11.69□□□□□ -0.54
CTSA-219ENST00000607841 LSM3P62310 102 aaKnown RBP11.69□□□□□ -0.54
CTSA-219ENST00000607841 NKAPLQ5M9Q1 402 aa11.69□□□□□ -0.54
CTSA-219ENST00000607841 C9orf139Q6ZV77 190 aa11.69□□□□□ -0.54
CTSA-219ENST00000607841 NR2C2APQ86WQ0 139 aa11.69□□□□□ -0.54
CTSA-219ENST00000607841 OR56B1Q8NGI3 324 aa11.69□□□□□ -0.54
CTSA-219ENST00000607841 ZNF418Q8TF45 676 aaPredicted RBP11.69□□□□□ -0.54
CTSA-219ENST00000607841 PTX4Q96A99 478 aa11.69□□□□□ -0.54
CTSA-219ENST00000607841 LPAR5Q9H1C0 372 aa11.69□□□□□ -0.54
CTSA-219ENST00000607841 KCNK15Q9H427 330 aa11.69□□□□□ -0.54
CTSA-219ENST00000607841 OCEL1Q9H607 264 aa11.69□□□□□ -0.54
CTSA-219ENST00000607841 ETAA1Q9NY74 926 aa11.69□□□□□ -0.54
CTSA-219ENST00000607841 ZNF581Q9P0T4 197 aa11.69□□□□□ -0.54
CTSA-219ENST00000607841 ZNF69Q9UC07 566 aa11.69□□□□□ -0.54
CTSA-219ENST00000607841 SCOCQ9UIL1 159 aa11.69□□□□□ -0.54
CTSA-219ENST00000607841 KIF25Q9UIL4 384 aa11.69□□□□□ -0.54
CTSA-219ENST00000607841 ARHGAP32A7KAX9 2087 aa11.68□□□□□ -0.54
CTSA-219ENST00000607841 TMEM272A0A1B0GTI8 110 aa11.68□□□□□ -0.54
CTSA-219ENST00000607841 MEX3AA1L020 520 aaKnown RBP11.68□□□□□ -0.54
CTSA-219ENST00000607841 METTL21EPA6NDL7 271 aa11.68□□□□□ -0.54
CTSA-219ENST00000607841 ZNF729A6NN14 1252 aaPredicted RBP11.68□□□□□ -0.54
CTSA-219ENST00000607841 IL1AP01583 271 aa11.68□□□□□ -0.54
CTSA-219ENST00000607841 IGHV1-8P0DP01 117 aa11.68□□□□□ -0.54
CTSA-219ENST00000607841 SLC2A2P11168 524 aaPredicted RBP11.68□□□□□ -0.54
CTSA-219ENST00000607841 RAB6AP20340 208 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms