RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 SC5DO75845 299 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 RCBTB2O95199 551 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 MT-CO2P00403 227 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 PDYNP01213 254 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 IGF2P01344 180 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 C1QBP02746 253 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 PGA5P0DJD9 388 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 ERGP11308 486 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 AKR1C4P17516 323 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 GABRG2P18507 467 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 HTR2CP28335 458 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 ADORA1P30542 326 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 IFNGR2P38484 337 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 CD200P41217 278 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 HERVK_113P61574 105 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 PPP1CBP62140 327 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 NDPQ00604 133 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 ZNF616Q08AN1 781 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 ZNF79Q15937 498 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 PDZD11Q5EBL8 140 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 SAXO2Q658L1 398 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 LRRC28Q86X40 367 aaPredicted RBP3.5□□□□□ -1.85
LINC00397-202ENST00000606785 RIMKLAQ8IXN7 391 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 EIF4E3Q8N5X7 224 aaKnown RBP3.5□□□□□ -1.85
LINC00397-202ENST00000606785 GDPD1Q8N9F7 314 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 ATP6V1C2Q8NEY4 427 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 NOXO1Q8NFA2 376 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 LRRC29Q8WV35 223 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 OR8D1Q8WZ84 308 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 GHSRQ92847 366 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 TLCD1Q96CP7 247 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 RNF185Q96GF1 192 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 Q96MT0 163 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 KLF6Q99612 283 aaPredicted RBP3.5□□□□□ -1.85
LINC00397-202ENST00000606785 SDHCQ99643 169 aaPredicted RBP3.5□□□□□ -1.85
LINC00397-202ENST00000606785 SLC25A2Q9BXI2 301 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 TLNRD1Q9H1K6 362 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.5□□□□□ -1.85
LINC00397-202ENST00000606785 FAM49BQ9NUQ9 324 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 TRMT112Q9UI30 125 aaKnown RBP3.5□□□□□ -1.85
LINC00397-202ENST00000606785 FGD6Q6ZV73 1430 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 FLT4P35916 1363 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 JCADQ9P266 1359 aa3.5□□□□□ -1.85
LINC00397-202ENST00000606785 SEC14L6B5MCN3 397 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 H7C417 338 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 CNIH1O95406 144 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 IFNA17P01571 189 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 RLN2P04090 185 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 BPGMP07738 259 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 TRAPPC2P0DI81 140 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 TRAPPC2BP0DI82 140 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 PGA4P0DJD7 388 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 PGA3P0DJD8 388 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 CXCR1P25024 350 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 S100GP29377 79 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 CASP1P29466 404 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 PFN2P35080 140 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 CXCL5P42830 114 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 CRISP3P54108 245 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 OGFRL1Q5TC84 451 aaPredicted RBP3.49□□□□□ -1.85
LINC00397-202ENST00000606785 SAMD13Q5VXD3 122 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 TMEM42Q69YG0 159 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 FAHD1Q6P587 224 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 FBXW12Q6X9E4 464 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 SSX7Q7RTT5 188 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 SLC36A1Q7Z2H8 476 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 COMMD7Q86VX2 200 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 SLC34A3Q8N130 599 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 DAW1Q8N136 415 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 OR6V1Q8N148 313 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 C9orf62Q8N4C0 152 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 LINC01555Q8NAE3 123 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 OR4K2Q8NGD2 314 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 OR8U1Q8NH10 309 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 ZFP90Q8TF47 636 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 CASTOR1Q8WTX7 329 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 SCGB3A2Q96PL1 93 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 ZNF382Q96SR6 550 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 BEX2Q9BXY8 128 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 CDC42EP4Q9H3Q1 356 aaKnown RBP3.49□□□□□ -1.85
LINC00397-202ENST00000606785 ISYNA1Q9NPH2 558 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 DHCR7Q9UBM7 475 aaKnown RBP3.49□□□□□ -1.85
LINC00397-202ENST00000606785 MTFP1Q9UDX5 166 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 SCP2D1Q9UJQ7 156 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 HHLA2Q9UM44 414 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 KIF1BO60333 1816 aa3.49□□□□□ -1.85
LINC00397-202ENST00000606785 CAMSAP1Q5T5Y3 1602 aa3.48□□□□□ -1.85
LINC00397-202ENST00000606785 MED14O60244 1454 aa3.48□□□□□ -1.85
LINC00397-202ENST00000606785 RTEL1-TNFRSF6BF6WH68 1400 aa3.48□□□□□ -1.85
LINC00397-202ENST00000606785 SETD5Q9C0A6 1442 aa3.48□□□□□ -1.85
LINC00397-202ENST00000606785 TRAV8-7A0A075B6U6 113 aa3.48□□□□□ -1.85
LINC00397-202ENST00000606785 NKX2-6A6NCS4 301 aa3.48□□□□□ -1.85
LINC00397-202ENST00000606785 FAM166BA8MTA8 275 aa3.48□□□□□ -1.85
LINC00397-202ENST00000606785 ANKRD63C9JTQ0 380 aa3.48□□□□□ -1.85
LINC00397-202ENST00000606785 MRASO14807 208 aa3.48□□□□□ -1.85
LINC00397-202ENST00000606785 CDC40O60508 579 aaKnown RBP eCLIP3.48□□□□□ -1.85
LINC00397-202ENST00000606785 SS18L1O75177 396 aaPredicted RBP3.48□□□□□ -1.85
LINC00397-202ENST00000606785 C8GP07360 202 aa3.48□□□□□ -1.85
LINC00397-202ENST00000606785 PAEPP09466 180 aa3.48□□□□□ -1.85
LINC00397-202ENST00000606785 ZNF17P17021 662 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms