RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 TMEM186Q96B77 213 aa15.56■□□□□ 0.08
CCDC9-205ENST00000600117 URM1Q9BTM9 101 aaKnown RBP15.56■□□□□ 0.08
CCDC9-205ENST00000600117 RPUSD1Q9UJJ7 312 aaKnown RBP15.56■□□□□ 0.08
CCDC9-205ENST00000600117 IGHV2-70DA0A0C4DH43 119 aa15.55■□□□□ 0.08
CCDC9-205ENST00000600117 DPPA5A6NC42 116 aa15.55■□□□□ 0.08
CCDC9-205ENST00000600117 MGST3O14880 152 aa15.55■□□□□ 0.08
CCDC9-205ENST00000600117 ECDO95905 644 aaPredicted RBP15.55■□□□□ 0.08
CCDC9-205ENST00000600117 CSN2P05814 226 aa15.55■□□□□ 0.08
CCDC9-205ENST00000600117 SRSF2Q01130 221 aaKnown RBP15.55■□□□□ 0.08
CCDC9-205ENST00000600117 ATAD3CQ5T2N8 411 aa15.55■□□□□ 0.08
CCDC9-205ENST00000600117 CD276Q5ZPR3 534 aa15.55■□□□□ 0.08
CCDC9-205ENST00000600117 OR5D13Q8NGL4 314 aa15.55■□□□□ 0.08
CCDC9-205ENST00000600117 PPP1R35Q8TAP8 253 aa15.55■□□□□ 0.08
CCDC9-205ENST00000600117 RAB40AQ8WXH6 277 aa15.55■□□□□ 0.08
CCDC9-205ENST00000600117 H1FXQ92522 213 aaKnown RBP15.55■□□□□ 0.08
CCDC9-205ENST00000600117 MRI1Q9BV20 369 aa15.55■□□□□ 0.08
CCDC9-205ENST00000600117 DPCDQ9BVM2 203 aaPredicted RBP15.55■□□□□ 0.08
CCDC9-205ENST00000600117 HIF1ANQ9NWT6 349 aa15.55■□□□□ 0.08
CCDC9-205ENST00000600117 ABRACLQ9P1F3 81 aa15.55■□□□□ 0.08
CCDC9-205ENST00000600117 KIR2DS1A0A191URI9 304 aa15.54■□□□□ 0.08
CCDC9-205ENST00000600117 SMIM31A0A1B0GVY4 71 aa15.54■□□□□ 0.08
CCDC9-205ENST00000600117 ZNF701M0R085 212 aaPredicted RBP15.54■□□□□ 0.08
CCDC9-205ENST00000600117 HSPB6O14558 160 aa15.54■□□□□ 0.08
CCDC9-205ENST00000600117 SOCS1O15524 211 aa15.54■□□□□ 0.08
CCDC9-205ENST00000600117 PDCD6O75340 191 aa15.54■□□□□ 0.08
CCDC9-205ENST00000600117 SRD5A1P18405 259 aa15.54■□□□□ 0.08
CCDC9-205ENST00000600117 FUT3P21217 361 aa15.54■□□□□ 0.08
CCDC9-205ENST00000600117 CHATP28329 748 aa15.54■□□□□ 0.08
CCDC9-205ENST00000600117 RORCP51449 518 aa15.54■□□□□ 0.08
CCDC9-205ENST00000600117 RAB12Q6IQ22 244 aa15.54■□□□□ 0.08
CCDC9-205ENST00000600117 BRICD5Q6PL45 260 aa15.54■□□□□ 0.08
CCDC9-205ENST00000600117 RTN4RL2Q86UN3 420 aa15.54■□□□□ 0.08
CCDC9-205ENST00000600117 GLCCI1Q86VQ1 547 aa15.54■□□□□ 0.08
CCDC9-205ENST00000600117 BPIFB2Q8N4F0 458 aa15.54■□□□□ 0.08
CCDC9-205ENST00000600117 PLPPR1Q8TBJ4 325 aa15.54■□□□□ 0.08
CCDC9-205ENST00000600117 DYNC2LI1Q8TCX1 351 aa15.54■□□□□ 0.08
CCDC9-205ENST00000600117 KCTD12Q96CX2 325 aaKnown RBP15.54■□□□□ 0.08
CCDC9-205ENST00000600117 SLC25A38Q96DW6 304 aa15.54■□□□□ 0.08
CCDC9-205ENST00000600117 COQ2Q96H96 371 aa15.54■□□□□ 0.08
CCDC9-205ENST00000600117 SPACA1Q9HBV2 294 aa15.54■□□□□ 0.08
CCDC9-205ENST00000600117 C19orf12Q9NSK7 152 aa15.54■□□□□ 0.08
CCDC9-205ENST00000600117 RSL24D1Q9UHA3 163 aaKnown RBP15.54■□□□□ 0.08
CCDC9-205ENST00000600117 SPATA2Q9UM82 520 aa15.54■□□□□ 0.08
CCDC9-205ENST00000600117 INSIG2Q9Y5U4 225 aa15.54■□□□□ 0.08
CCDC9-205ENST00000600117 ETV7Q9Y603 341 aa15.54■□□□□ 0.08
CCDC9-205ENST00000600117 DSCAML1Q8TD84 2053 aa15.53■□□□□ 0.08
CCDC9-205ENST00000600117 TRBV23-1A0A0A0MS06 115 aa15.53■□□□□ 0.08
CCDC9-205ENST00000600117 CCDC160A6NGH7 325 aa15.53■□□□□ 0.08
CCDC9-205ENST00000600117 ENSAO43768 121 aaKnown RBP15.53■□□□□ 0.08
CCDC9-205ENST00000600117 ERP29P30040 261 aaKnown RBP15.53■□□□□ 0.08
CCDC9-205ENST00000600117 EDDM3AQ14507 147 aa15.53■□□□□ 0.08
CCDC9-205ENST00000600117 ATXN7L3Q14CW9 347 aaPredicted RBP15.53■□□□□ 0.08
CCDC9-205ENST00000600117 GDPD3Q7L5L3 318 aa15.53■□□□□ 0.08
CCDC9-205ENST00000600117 TPRX1Q8N7U7 411 aa15.53■□□□□ 0.08
CCDC9-205ENST00000600117 OR4M1Q8NGD0 313 aa15.53■□□□□ 0.08
CCDC9-205ENST00000600117 NUDT16L1Q9BRJ7 211 aaKnown RBP15.53■□□□□ 0.08
CCDC9-205ENST00000600117 PEX16Q9Y5Y5 336 aa15.53■□□□□ 0.08
CCDC9-205ENST00000600117 WNK2Q9Y3S1 2297 aa15.53■□□□□ 0.08
CCDC9-205ENST00000600117 RAB27BO00194 218 aa15.52■□□□□ 0.08
CCDC9-205ENST00000600117 GLAP06280 429 aa15.52■□□□□ 0.08
CCDC9-205ENST00000600117 ZNF182P17025 639 aaPredicted RBP15.52■□□□□ 0.08
CCDC9-205ENST00000600117 BLVRBP30043 206 aaPredicted RBP15.52■□□□□ 0.08
CCDC9-205ENST00000600117 KCNJ3P48549 501 aa15.52■□□□□ 0.08
CCDC9-205ENST00000600117 VEGFCP49767 419 aa15.52■□□□□ 0.08
CCDC9-205ENST00000600117 P2RX3P56373 397 aa15.52■□□□□ 0.08
CCDC9-205ENST00000600117 TMEM50BP56557 158 aa15.52■□□□□ 0.08
CCDC9-205ENST00000600117 EDDM3BP56851 147 aa15.52■□□□□ 0.08
CCDC9-205ENST00000600117 RPL31P62899 125 aaKnown RBP15.52■□□□□ 0.08
CCDC9-205ENST00000600117 PAX5Q02548 391 aa15.52■□□□□ 0.08
CCDC9-205ENST00000600117 AESQ08117 197 aa15.52■□□□□ 0.08
CCDC9-205ENST00000600117 DYNC1I2Q13409 638 aaKnown RBP15.52■□□□□ 0.08
CCDC9-205ENST00000600117 MOGAT2Q3SYC2 334 aa15.52■□□□□ 0.08
CCDC9-205ENST00000600117 RSBN1Q5VWQ0 802 aaPredicted RBP15.52■□□□□ 0.08
CCDC9-205ENST00000600117 FOXB2Q5VYV0 432 aa15.52■□□□□ 0.08
CCDC9-205ENST00000600117 TCF23Q7RTU1 214 aa15.52■□□□□ 0.08
CCDC9-205ENST00000600117 OR56B1Q8NGI3 324 aa15.52■□□□□ 0.08
CCDC9-205ENST00000600117 RHBDL2Q9NX52 303 aa15.52■□□□□ 0.08
CCDC9-205ENST00000600117 NDUFA13Q9P0J0 144 aa15.52■□□□□ 0.08
CCDC9-205ENST00000600117 MCRIP1C9JLW8 97 aa15.51■□□□□ 0.07
CCDC9-205ENST00000600117 H3BUI4 141 aa15.51■□□□□ 0.07
CCDC9-205ENST00000600117 PPIAL4GP0DN37 164 aa15.51■□□□□ 0.07
CCDC9-205ENST00000600117 GLIPR1P48060 266 aa15.51■□□□□ 0.07
CCDC9-205ENST00000600117 PAX8Q06710 450 aa15.51■□□□□ 0.07
CCDC9-205ENST00000600117 PLAC9Q5JTB6 97 aa15.51■□□□□ 0.07
CCDC9-205ENST00000600117 NKAPLQ5M9Q1 402 aa15.51■□□□□ 0.07
CCDC9-205ENST00000600117 C6orf201Q7Z4U5 140 aa15.51■□□□□ 0.07
CCDC9-205ENST00000600117 DMRTB1Q96MA1 342 aa15.51■□□□□ 0.07
CCDC9-205ENST00000600117 NEDD4LQ96PU5 975 aa15.51■□□□□ 0.07
CCDC9-205ENST00000600117 SULT4A1Q9BR01 284 aa15.51■□□□□ 0.07
CCDC9-205ENST00000600117 CCDC59Q9P031 241 aaKnown RBP15.51■□□□□ 0.07
CCDC9-205ENST00000600117 HSF4Q9ULV5 492 aa15.51■□□□□ 0.07
CCDC9-205ENST00000600117 A0A0G2JMP0 313 aa15.5■□□□□ 0.07
CCDC9-205ENST00000600117 A0A0X1KG70 313 aa15.5■□□□□ 0.07
CCDC9-205ENST00000600117 METTL21EPA6NDL7 271 aa15.5■□□□□ 0.07
CCDC9-205ENST00000600117 LIPFP07098 398 aa15.5■□□□□ 0.07
CCDC9-205ENST00000600117 GATA3P23771 443 aa15.5■□□□□ 0.07
CCDC9-205ENST00000600117 MEF2CQ06413 473 aaPredicted RBP15.5■□□□□ 0.07
CCDC9-205ENST00000600117 ZNF273Q14593 569 aa15.5■□□□□ 0.07
CCDC9-205ENST00000600117 FAM189A2Q15884 450 aa15.5■□□□□ 0.07
CCDC9-205ENST00000600117 KRBOX4Q5JUW0 171 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms