RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 RPS10-NUDT3A0A1W2PQS6 291 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 ZNF705EA8MWA4 302 aaPredicted RBP2.08□□□□□ -2.08
VRK3-204ENST00000593912 SIRPB1O00241 398 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 DYNC1I1O14576 645 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 XKRYO14609 159 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 NBR2O15453 112 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 OR2C1O95371 312 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 NUDT3O95989 172 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 HAND1O96004 215 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 ANXA2P07355 339 aaKnown RBP2.08□□□□□ -2.08
VRK3-204ENST00000593912 GIG44P09565 113 aaPredicted RBP2.08□□□□□ -2.08
VRK3-204ENST00000593912 CALCBP10092 127 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 HAAOP46952 286 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 NME5P56597 212 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 RPL37AP61513 92 aaKnown RBP2.08□□□□□ -2.08
VRK3-204ENST00000593912 MRPS25P82663 173 aaKnown RBP2.08□□□□□ -2.08
VRK3-204ENST00000593912 AESQ08117 197 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 MED21Q13503 144 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 KRR1Q13601 381 aaKnown RBP2.08□□□□□ -2.08
VRK3-204ENST00000593912 USF2Q15853 346 aaPredicted RBP2.08□□□□□ -2.08
VRK3-204ENST00000593912 SLC22A6Q4U2R8 563 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 ANXA8L1Q5VT79 327 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 CAVIN1Q6NZI2 390 aaKnown RBP2.08□□□□□ -2.08
VRK3-204ENST00000593912 CD200R1LQ6Q8B3 271 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 HACD2Q6Y1H2 254 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 ZNF66Q6ZN08 573 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 RBPMS2Q6ZRY4 209 aaKnown RBP2.08□□□□□ -2.08
VRK3-204ENST00000593912 Q6ZSA8 131 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 CYS1Q717R9 158 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 FAM57BQ71RH2 274 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 SSX7Q7RTT5 188 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 FAM122BQ7Z309 247 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 SLC22A9Q8IVM8 553 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 KIRREL3Q8IZU9 778 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 SVOPQ8N4V2 548 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 POC5Q8NA72 575 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 FAM156AQ8NDB6 213 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 CSNK2A3Q8NEV1 391 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 OR51A7Q8NH64 312 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 OR1L1Q8NH94 360 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 RFESDQ8TAC1 157 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 CORO2AQ92828 525 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 SNAPC3Q92966 411 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 EMG1Q92979 244 aaKnown RBP2.08□□□□□ -2.08
VRK3-204ENST00000593912 PPP3R2Q96LZ3 170 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 ZNF570Q96NI8 536 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 UHRF2Q96PU4 802 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 HIST1H2AAQ96QV6 131 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 PANX1Q96RD7 426 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 CLCC1Q96S66 551 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 COPS4Q9BT78 406 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 NSRP1Q9H0G5 558 aaKnown RBP2.08□□□□□ -2.08
VRK3-204ENST00000593912 CST11Q9H112 138 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 FBXL15Q9H469 300 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 BCL2L10Q9HD36 194 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 SPAG4Q9NPE6 437 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 BRD7Q9NPI1 651 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 TAS2R3Q9NYW6 316 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 DNAJC27Q9NZQ0 273 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 CYB5R1Q9UHQ9 305 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 ENPP5Q9UJA9 477 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 ERGIC3Q9Y282 383 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 SNX24Q9Y343 169 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 JRKLQ9Y4A0 524 aa2.08□□□□□ -2.08
VRK3-204ENST00000593912 ODAMA1E959 279 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 C15orf61A6NNL5 157 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 C5orf58C9J3I9 102 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 J3QT63 122 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 CXCR6O00574 342 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 MGST3O14880 152 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 SLC31A2O15432 143 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 TRIM13O60858 407 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 NOS1APO75052 506 aaPredicted RBP2.07□□□□□ -2.08
VRK3-204ENST00000593912 KRT36O76013 467 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 KRT75O95678 551 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 CST4P01036 141 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 TPM3P06753 285 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 CHRNGP07510 517 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 APELAP0DMC3 54 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 C4BPBP20851 252 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 CD40LGP29965 261 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 ERP29P30040 261 aaKnown RBP2.07□□□□□ -2.08
VRK3-204ENST00000593912 VHLP40337 213 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 CDKN2AP42771 156 aaKnown RBP2.07□□□□□ -2.08
VRK3-204ENST00000593912 GLP1RP43220 463 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 OR3A3P47888 321 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 CX3CR1P49238 355 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 ATP1B3P54709 279 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 EMP1P54849 157 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 CCL18P55774 89 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 TXNL4AP83876 142 aaKnown RBP2.07□□□□□ -2.08
VRK3-204ENST00000593912 TMEM267Q0VDI3 215 aaPredicted RBP2.07□□□□□ -2.08
VRK3-204ENST00000593912 LSAMPQ13449 338 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 EXOSC2Q13868 293 aaKnown RBP2.07□□□□□ -2.08
VRK3-204ENST00000593912 CEACAM21Q3KPI0 293 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 AKIRIN2Q53H80 203 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 C6orf10Q5SRN2 563 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 PLCXD3Q63HM9 321 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 FAHD1Q6P587 224 aa2.07□□□□□ -2.08
VRK3-204ENST00000593912 CLEC19AQ6UXS0 136 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms