RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 COX7A2P2O60397 106 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 GYPAP02724 150 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 IGFBP1P08833 259 aaPredicted RBP5.42□□□□□ -1.54
SMAD4-212ENST00000591126 MAS1LP35410 378 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 LOXL3P58215 753 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 COL10A1Q03692 680 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 ATXN7L3Q14CW9 347 aaPredicted RBP5.42□□□□□ -1.54
SMAD4-212ENST00000591126 TMEM217Q8N7C4 229 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 RNF166Q96A37 237 aaPredicted RBP5.42□□□□□ -1.54
SMAD4-212ENST00000591126 STARD4Q96DR4 205 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 BSCL2Q96G97 398 aaPredicted RBP5.42□□□□□ -1.54
SMAD4-212ENST00000591126 C7orf34Q96L11 122 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 CCL13Q99616 98 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 ZNF2Q9BSG1 426 aaPredicted RBP5.42□□□□□ -1.54
SMAD4-212ENST00000591126 C20orf27Q9GZN8 174 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 PLEKHA2Q9HB19 425 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 CLEC5AQ9NY25 188 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 TREM2Q9NZC2 230 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 LINC00312Q9Y6C7 94 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 TSPAN15O95858 294 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 PTTG1O95997 202 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 IGKV1D-16P01601 117 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 ACSM4P0C7M7 580 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 OR2G6Q5TZ20 316 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 ZNF343Q6P1L6 599 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 PRSS57Q6UWY2 283 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 OLIG3Q7RTU3 272 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 SLC35E3Q7Z769 313 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 CXorf58Q96LI9 332 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 RAB40CQ96S21 281 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 SEC22CQ9BRL7 303 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 FUNDC2Q9BWH2 189 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 CHIAQ9BZP6 476 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 IKZF5Q9H5V7 419 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 TXNL4BQ9NX01 149 aaKnown RBP5.42□□□□□ -1.54
SMAD4-212ENST00000591126 SPRR3Q9UBC9 169 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 DTX4Q9Y2E6 619 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 NPIPB9F8W1W9 429 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 K7EPK0 472 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 SNCGO76070 127 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 HLA-AP01891 365 aaKnown RBP5.42□□□□□ -1.54
SMAD4-212ENST00000591126 RFPL3SP0C7P2 107 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 TPT1P13693 172 aaKnown RBP5.42□□□□□ -1.54
SMAD4-212ENST00000591126 HIST1H1DP16402 221 aaKnown RBP5.42□□□□□ -1.54
SMAD4-212ENST00000591126 CA5AP35218 305 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 P2RX3P56373 397 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 EFNB3Q15768 340 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 MOGAT2Q3SYC2 334 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 WDR38Q5JTN6 314 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 SLC35E4Q6ICL7 350 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 ABHD12Q8N2K0 398 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 FAM71E2Q8N5Q1 922 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 TMEM229BQ8NBD8 167 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 OR4A5Q8NH83 315 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 RPL3LQ92901 407 aaKnown RBP5.42□□□□□ -1.54
SMAD4-212ENST00000591126 TNFRSF19Q9NS68 423 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 CYB5R1Q9UHQ9 305 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 SHROOM3Q8TF72 1996 aa5.42□□□□□ -1.54
SMAD4-212ENST00000591126 A0A0D9SG52 128 aa5.41□□□□□ -1.54
SMAD4-212ENST00000591126 LY6G6EA0A0G2JKS1 128 aa5.41□□□□□ -1.54
SMAD4-212ENST00000591126 ZC3H12DA2A288 527 aaKnown RBP5.41□□□□□ -1.54
SMAD4-212ENST00000591126 SYNGR1O43759 233 aa5.41□□□□□ -1.54
SMAD4-212ENST00000591126 HPRT1P00492 218 aa5.41□□□□□ -1.54
SMAD4-212ENST00000591126 ISG15P05161 165 aa5.41□□□□□ -1.54
SMAD4-212ENST00000591126 ELK1P19419 428 aa5.41□□□□□ -1.54
SMAD4-212ENST00000591126 CCR6P51684 374 aa5.41□□□□□ -1.54
SMAD4-212ENST00000591126 UBE2G1P62253 170 aa5.41□□□□□ -1.54
SMAD4-212ENST00000591126 C2orf76Q3KRA6 126 aa5.41□□□□□ -1.54
SMAD4-212ENST00000591126 RFPL4BQ6ZWI9 263 aa5.41□□□□□ -1.54
SMAD4-212ENST00000591126 COMTD1Q86VU5 262 aa5.41□□□□□ -1.54
SMAD4-212ENST00000591126 ADAD2Q8NCV1 583 aaKnown RBP5.41□□□□□ -1.54
SMAD4-212ENST00000591126 HPSE2Q8WWQ2 592 aa5.41□□□□□ -1.54
SMAD4-212ENST00000591126 HARBI1Q96MB7 349 aa5.41□□□□□ -1.54
SMAD4-212ENST00000591126 WFIKKN1Q96NZ8 548 aa5.41□□□□□ -1.54
SMAD4-212ENST00000591126 METTL26Q96S19 204 aa5.41□□□□□ -1.54
SMAD4-212ENST00000591126 MYEF2Q9P2K5 600 aaKnown RBP5.41□□□□□ -1.54
SMAD4-212ENST00000591126 U3KQA8 63 aa5.41□□□□□ -1.54
SMAD4-212ENST00000591126 AP4M1O00189 453 aa5.41□□□□□ -1.54
SMAD4-212ENST00000591126 XRCC3O43542 346 aa5.41□□□□□ -1.54
SMAD4-212ENST00000591126 ALX3O95076 343 aa5.41□□□□□ -1.54
SMAD4-212ENST00000591126 S1PR2O95136 353 aa5.41□□□□□ -1.54
SMAD4-212ENST00000591126 COL9A2Q14055 689 aaPredicted RBP5.41□□□□□ -1.54
SMAD4-212ENST00000591126 GAMTQ14353 236 aa5.41□□□□□ -1.54
SMAD4-212ENST00000591126 RPEL1Q2QD12 228 aa5.41□□□□□ -1.54
SMAD4-212ENST00000591126 GTSCR1Q86UQ5 136 aa5.41□□□□□ -1.54
SMAD4-212ENST00000591126 UBAC2Q8NBM4 344 aa5.41□□□□□ -1.54
SMAD4-212ENST00000591126 ITPKCQ96DU7 683 aa5.41□□□□□ -1.54
SMAD4-212ENST00000591126 ZDBF2Q9HCK1 2354 aa5.41□□□□□ -1.54
SMAD4-212ENST00000591126 TCRBV5S2A0A599 114 aa5.41□□□□□ -1.54
SMAD4-212ENST00000591126 SPRY1O43609 319 aaPredicted RBP5.41□□□□□ -1.54
SMAD4-212ENST00000591126 RPL27AP46776 148 aaKnown RBP5.41□□□□□ -1.54
SMAD4-212ENST00000591126 EXOSC2Q13868 293 aaKnown RBP5.41□□□□□ -1.54
SMAD4-212ENST00000591126 LCN10Q6JVE6 187 aa5.41□□□□□ -1.54
SMAD4-212ENST00000591126 IL17DQ8TAD2 202 aa5.41□□□□□ -1.54
SMAD4-212ENST00000591126 TAS2R5Q9NYW4 299 aa5.41□□□□□ -1.54
SMAD4-212ENST00000591126 CRIM1Q9NZV1 1036 aa5.41□□□□□ -1.54
SMAD4-212ENST00000591126 MRM2Q9UI43 246 aaKnown RBP5.41□□□□□ -1.54
SMAD4-212ENST00000591126 ZNF835Q9Y2P0 537 aa5.41□□□□□ -1.54
SMAD4-212ENST00000591126 NUP205Q92621 2012 aa5.41□□□□□ -1.54
SMAD4-212ENST00000591126 NUP210Q8TEM1 1887 aaPredicted RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms