RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 TAS2R46P59540 309 aa13.19□□□□□ -0.3
CIRBP-228ENST00000590347 DPTQ07507 201 aa13.19□□□□□ -0.3
CIRBP-228ENST00000590347 ATOH7Q8N100 152 aa13.19□□□□□ -0.3
CIRBP-228ENST00000590347 TMEM252Q8N6L7 170 aa13.19□□□□□ -0.3
CIRBP-228ENST00000590347 PLEKHJ1Q9NW61 149 aa13.19□□□□□ -0.3
CIRBP-228ENST00000590347 P4HTMQ9NXG6 502 aa13.19□□□□□ -0.3
CIRBP-228ENST00000590347 RNF115Q9Y4L5 304 aa13.19□□□□□ -0.3
CIRBP-228ENST00000590347 A0A1W2PQU0 124 aa13.19□□□□□ -0.3
CIRBP-228ENST00000590347 M0QZK8 103 aa13.19□□□□□ -0.3
CIRBP-228ENST00000590347 MSTNO14793 375 aa13.19□□□□□ -0.3
CIRBP-228ENST00000590347 GGCTO75223 188 aaKnown RBP13.19□□□□□ -0.3
CIRBP-228ENST00000590347 UMODP07911 640 aa13.19□□□□□ -0.3
CIRBP-228ENST00000590347 DUSP1P28562 367 aa13.19□□□□□ -0.3
CIRBP-228ENST00000590347 RABIFP47224 123 aa13.19□□□□□ -0.3
CIRBP-228ENST00000590347 CNN1P51911 297 aaKnown RBP13.19□□□□□ -0.3
CIRBP-228ENST00000590347 RPS15AP62244 130 aaKnown RBP13.19□□□□□ -0.3
CIRBP-228ENST00000590347 COL5A1-AS1Q5SY13 56 aa13.19□□□□□ -0.3
CIRBP-228ENST00000590347 FIGLAQ6QHK4 219 aa13.19□□□□□ -0.3
CIRBP-228ENST00000590347 Q6ZWC4 215 aa13.19□□□□□ -0.3
CIRBP-228ENST00000590347 TMPRSS7Q7RTY8 843 aa13.19□□□□□ -0.3
CIRBP-228ENST00000590347 HSPB9Q9BQS6 159 aa13.19□□□□□ -0.3
CIRBP-228ENST00000590347 MIEN1Q9BRT3 115 aa13.19□□□□□ -0.3
CIRBP-228ENST00000590347 ALKBH7Q9BT30 221 aaPredicted RBP13.19□□□□□ -0.3
CIRBP-228ENST00000590347 WWTR1Q9GZV5 400 aa13.19□□□□□ -0.3
CIRBP-228ENST00000590347 ERRFI1Q9UJM3 462 aaPredicted RBP13.19□□□□□ -0.3
CIRBP-228ENST00000590347 NBEAQ8NFP9 2946 aa13.19□□□□□ -0.3
CIRBP-228ENST00000590347 ETV2O00321 342 aaPredicted RBP13.18□□□□□ -0.3
CIRBP-228ENST00000590347 HYAL1Q12794 435 aa13.18□□□□□ -0.3
CIRBP-228ENST00000590347 KLHL24Q6TFL4 600 aa13.18□□□□□ -0.3
CIRBP-228ENST00000590347 CADM4Q8NFZ8 388 aa13.18□□□□□ -0.3
CIRBP-228ENST00000590347 OR51G1Q8NGK1 321 aa13.18□□□□□ -0.3
CIRBP-228ENST00000590347 OIT3Q8WWZ8 545 aa13.18□□□□□ -0.3
CIRBP-228ENST00000590347 PRSS50Q9UI38 385 aa13.18□□□□□ -0.3
CIRBP-228ENST00000590347 RNF114Q9Y508 228 aa13.18□□□□□ -0.3
CIRBP-228ENST00000590347 TRIOBPQ9H2D6 2365 aa13.18□□□□□ -0.3
CIRBP-228ENST00000590347 TRBV11-1A0A0K0K1C0 115 aa13.18□□□□□ -0.3
CIRBP-228ENST00000590347 A0A1B0GW64 132 aa13.18□□□□□ -0.3
CIRBP-228ENST00000590347 F2Z2F3 143 aa13.18□□□□□ -0.3
CIRBP-228ENST00000590347 ZNF266Q14584 549 aa13.18□□□□□ -0.3
CIRBP-228ENST00000590347 ZNF141Q15928 474 aa13.18□□□□□ -0.3
CIRBP-228ENST00000590347 FAM78BQ5VT40 261 aa13.18□□□□□ -0.3
CIRBP-228ENST00000590347 HLA-CQ95604 372 aa13.18□□□□□ -0.3
CIRBP-228ENST00000590347 CTHRC1Q96CG8 243 aa13.18□□□□□ -0.3
CIRBP-228ENST00000590347 SLAMF6Q96DU3 332 aa13.18□□□□□ -0.3
CIRBP-228ENST00000590347 ZPBPQ9BS86 351 aa13.18□□□□□ -0.3
CIRBP-228ENST00000590347 VAMP8Q9BV40 100 aa13.18□□□□□ -0.3
CIRBP-228ENST00000590347 NAA60Q9H7X0 242 aa13.18□□□□□ -0.3
CIRBP-228ENST00000590347 SLC2A9Q9NRM0 540 aa13.18□□□□□ -0.3
CIRBP-228ENST00000590347 C2orf16Q68DN1 1984 aa13.17□□□□□ -0.3
CIRBP-228ENST00000590347 PGPEP1LA6NFU8 196 aa13.17□□□□□ -0.3
CIRBP-228ENST00000590347 BCL2P10415 239 aa13.17□□□□□ -0.3
CIRBP-228ENST00000590347 CARD17Q5XLA6 110 aa13.17□□□□□ -0.3
CIRBP-228ENST00000590347 S100A7AQ86SG5 101 aa13.17□□□□□ -0.3
CIRBP-228ENST00000590347 SAXO1Q8IYX7 474 aa13.17□□□□□ -0.3
CIRBP-228ENST00000590347 CA13Q8N1Q1 262 aa13.17□□□□□ -0.3
CIRBP-228ENST00000590347 TMEM170AQ8WVE7 144 aa13.17□□□□□ -0.3
CIRBP-228ENST00000590347 RERGQ96A58 199 aaPredicted RBP13.17□□□□□ -0.3
CIRBP-228ENST00000590347 BTF3L4Q96K17 158 aa13.17□□□□□ -0.3
CIRBP-228ENST00000590347 SLC35E1Q96K37 410 aa13.17□□□□□ -0.3
CIRBP-228ENST00000590347 ATP5SQ99766 215 aa13.17□□□□□ -0.3
CIRBP-228ENST00000590347 WNT16Q9UBV4 365 aa13.17□□□□□ -0.3
CIRBP-228ENST00000590347 TP73-AS1Q9UF72 201 aa13.17□□□□□ -0.3
CIRBP-228ENST00000590347 SPIN3Q5JUX0 258 aa13.17□□□□□ -0.3
CIRBP-228ENST00000590347 PTPMT1Q8WUK0 201 aaPredicted RBP13.17□□□□□ -0.3
CIRBP-228ENST00000590347 ZCCHC14Q8WYQ9 949 aaKnown RBP13.17□□□□□ -0.3
CIRBP-228ENST00000590347 ZNF845Q96IR2 970 aaPredicted RBP13.17□□□□□ -0.3
CIRBP-228ENST00000590347 RASL10BQ96S79 203 aa13.17□□□□□ -0.3
CIRBP-228ENST00000590347 MUC3AQ02505 3323 aa13.17□□□□□ -0.3
CIRBP-228ENST00000590347 IGKV1-9A0A0C4DH69 117 aa13.17□□□□□ -0.3
CIRBP-228ENST00000590347 KCNMB1Q16558 191 aa13.17□□□□□ -0.3
CIRBP-228ENST00000590347 BSXQ3C1V8 233 aa13.17□□□□□ -0.3
CIRBP-228ENST00000590347 FRYLO94915 3013 aa13.16□□□□□ -0.3
CIRBP-228ENST00000590347 CXorf51AA0A1B0GTR3 108 aa13.16□□□□□ -0.3
CIRBP-228ENST00000590347 PNMTP11086 282 aa13.16□□□□□ -0.3
CIRBP-228ENST00000590347 KRTDAPP60985 99 aa13.16□□□□□ -0.3
CIRBP-228ENST00000590347 ZNF726P1Q15940 193 aa13.16□□□□□ -0.3
CIRBP-228ENST00000590347 PRTGQ2VWP7 1150 aa13.16□□□□□ -0.3
CIRBP-228ENST00000590347 ZNF542PQ5EBM4 170 aa13.16□□□□□ -0.3
CIRBP-228ENST00000590347 GPR35Q9HC97 309 aa13.16□□□□□ -0.3
CIRBP-228ENST00000590347 MANBALQ9NQG1 85 aa13.16□□□□□ -0.3
CIRBP-228ENST00000590347 FAM206AQ9NX38 181 aa13.16□□□□□ -0.3
CIRBP-228ENST00000590347 SHISA8B8ZZ34 492 aa13.16□□□□□ -0.3
CIRBP-228ENST00000590347 E9PLN8 166 aa13.16□□□□□ -0.3
CIRBP-228ENST00000590347 ADAM20O43506 726 aa13.16□□□□□ -0.3
CIRBP-228ENST00000590347 CTSDP07339 412 aaPredicted RBP13.16□□□□□ -0.3
CIRBP-228ENST00000590347 PGCP20142 388 aa13.16□□□□□ -0.3
CIRBP-228ENST00000590347 COL9A1P20849 921 aa13.16□□□□□ -0.3
CIRBP-228ENST00000590347 RPS16P62249 146 aaKnown RBP13.16□□□□□ -0.3
CIRBP-228ENST00000590347 TMEM196Q5HYL7 178 aa13.16□□□□□ -0.3
CIRBP-228ENST00000590347 UEVLDQ8IX04 471 aa13.16□□□□□ -0.3
CIRBP-228ENST00000590347 PLPPR1Q8TBJ4 325 aa13.16□□□□□ -0.3
CIRBP-228ENST00000590347 ZC2HC1AQ96GY0 325 aa13.16□□□□□ -0.3
CIRBP-228ENST00000590347 CCDC3Q9BQI4 270 aa13.16□□□□□ -0.3
CIRBP-228ENST00000590347 PLK3Q9H4B4 646 aa13.16□□□□□ -0.3
CIRBP-228ENST00000590347 FGF22Q9HCT0 170 aa13.16□□□□□ -0.3
CIRBP-228ENST00000590347 RPH3ALQ9UNE2 315 aa13.16□□□□□ -0.3
CIRBP-228ENST00000590347 C17orf105B2RV13 164 aa13.15□□□□□ -0.3
CIRBP-228ENST00000590347 GALNSP34059 522 aa13.15□□□□□ -0.3
CIRBP-228ENST00000590347 GPR3P46089 330 aa13.15□□□□□ -0.3
CIRBP-228ENST00000590347 TMEM52BQ4KMG9 183 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms