RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	CRIM1	Q9NZV1	1036 aa		13.22	□□□□□ -0.29
DDX39A-209	ENST00000589318	RP1L1	Q8IWN7	2480 aa	Predicted RBP	13.22	□□□□□ -0.29
DDX39A-209	ENST00000589318	ZNF816-ZNF321P	A0A0X1KG74	233 aa		13.21	□□□□□ -0.29
DDX39A-209	ENST00000589318		A0A1W2PP11	408 aa		13.21	□□□□□ -0.29
DDX39A-209	ENST00000589318	NRAS	P01111	189 aa		13.21	□□□□□ -0.29
DDX39A-209	ENST00000589318	CDX1	P47902	265 aa	Predicted RBP	13.21	□□□□□ -0.29
DDX39A-209	ENST00000589318	RHEB	Q15382	184 aa		13.21	□□□□□ -0.29
DDX39A-209	ENST00000589318	DOLPP1	Q86YN1	238 aa		13.21	□□□□□ -0.29
DDX39A-209	ENST00000589318	ZNF565	Q8N9K5	539 aa		13.21	□□□□□ -0.29
DDX39A-209	ENST00000589318	OR56B2P	Q8NGI1	322 aa		13.21	□□□□□ -0.29
DDX39A-209	ENST00000589318	OR10R2	Q8NGX6	335 aa		13.21	□□□□□ -0.29
DDX39A-209	ENST00000589318	S100A13	Q99584	98 aa		13.21	□□□□□ -0.29
DDX39A-209	ENST00000589318	SULT4A1	Q9BR01	284 aa		13.21	□□□□□ -0.29
DDX39A-209	ENST00000589318	LPAR5	Q9H1C0	372 aa		13.21	□□□□□ -0.29
DDX39A-209	ENST00000589318	CHMP1A	Q9HD42	196 aa	Predicted RBP	13.21	□□□□□ -0.29
DDX39A-209	ENST00000589318	RPS10P5	Q9NQ39	176 aa		13.21	□□□□□ -0.29
DDX39A-209	ENST00000589318	PARP11	Q9NR21	331 aa		13.21	□□□□□ -0.29
DDX39A-209	ENST00000589318	CYTL1	Q9NRR1	136 aa		13.21	□□□□□ -0.29
DDX39A-209	ENST00000589318		A0A1B0GWJ7	208 aa		13.21	□□□□□ -0.3
DDX39A-209	ENST00000589318	CYB5A	P00167	134 aa		13.21	□□□□□ -0.3
DDX39A-209	ENST00000589318	IGKV3-15	P01624	115 aa		13.21	□□□□□ -0.3
DDX39A-209	ENST00000589318	AMY2A	P04746	511 aa		13.21	□□□□□ -0.3
DDX39A-209	ENST00000589318	GLI4	P10075	376 aa		13.21	□□□□□ -0.3
DDX39A-209	ENST00000589318	PGAM2	P15259	253 aa		13.21	□□□□□ -0.3
DDX39A-209	ENST00000589318	NQO2	P16083	231 aa		13.21	□□□□□ -0.3
DDX39A-209	ENST00000589318	IDH3G	P51553	393 aa	Predicted RBP	13.21	□□□□□ -0.3
DDX39A-209	ENST00000589318	GUCA2A	Q02747	115 aa		13.21	□□□□□ -0.3
DDX39A-209	ENST00000589318	P2RY6	Q15077	328 aa		13.21	□□□□□ -0.3
DDX39A-209	ENST00000589318	SSX2	Q16385	188 aa		13.21	□□□□□ -0.3
DDX39A-209	ENST00000589318	LRRC37A5P	Q49AS3	106 aa		13.21	□□□□□ -0.3
DDX39A-209	ENST00000589318	ZNF474	Q6S9Z5	364 aa	Predicted RBP	13.21	□□□□□ -0.3
DDX39A-209	ENST00000589318	ACBD4	Q8NC06	268 aa		13.21	□□□□□ -0.3
DDX39A-209	ENST00000589318	TMEM231	Q9H6L2	316 aa		13.21	□□□□□ -0.3
DDX39A-209	ENST00000589318	ZNF835	Q9Y2P0	537 aa		13.21	□□□□□ -0.3
DDX39A-209	ENST00000589318		A0A0A6YYD4	124 aa		13.2	□□□□□ -0.3
DDX39A-209	ENST00000589318	CDC14B	O60729	498 aa		13.2	□□□□□ -0.3
DDX39A-209	ENST00000589318	FCGR3A	P08637	254 aa		13.2	□□□□□ -0.3
DDX39A-209	ENST00000589318	LYL1	P12980	280 aa		13.2	□□□□□ -0.3
DDX39A-209	ENST00000589318	MALL	Q13021	153 aa		13.2	□□□□□ -0.3
DDX39A-209	ENST00000589318	RBM39	Q14498	530 aa	Known RBP	13.2	□□□□□ -0.3
DDX39A-209	ENST00000589318	ATXN7L3	Q14CW9	347 aa	Predicted RBP	13.2	□□□□□ -0.3
DDX39A-209	ENST00000589318	CNN3	Q15417	329 aa	Known RBP	13.2	□□□□□ -0.3
DDX39A-209	ENST00000589318	TBC1D28	Q2M2D7	210 aa		13.2	□□□□□ -0.3
DDX39A-209	ENST00000589318	C9orf152	Q5JTZ5	239 aa		13.2	□□□□□ -0.3
DDX39A-209	ENST00000589318	PNLDC1	Q8NA58	520 aa	Known RBP	13.2	□□□□□ -0.3
DDX39A-209	ENST00000589318	OR56B1	Q8NGI3	324 aa		13.2	□□□□□ -0.3
DDX39A-209	ENST00000589318	KCNG3	Q8TAE7	436 aa		13.2	□□□□□ -0.3
DDX39A-209	ENST00000589318	TMED6	Q8WW62	240 aa		13.2	□□□□□ -0.3
DDX39A-209	ENST00000589318	DCUN1D4	Q92564	292 aa		13.2	□□□□□ -0.3
DDX39A-209	ENST00000589318	KIRREL1	Q96J84	757 aa		13.2	□□□□□ -0.3
DDX39A-209	ENST00000589318	NICN1	Q9BSH3	213 aa		13.2	□□□□□ -0.3
DDX39A-209	ENST00000589318		A0A1W2PPE3	182 aa		13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	ZNF736	B4DX44	427 aa	Predicted RBP	13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	TAS2R31	P59538	309 aa		13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	MRPL21	Q7Z2W9	205 aa	Known RBP	13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	RTN4RL2	Q86UN3	420 aa		13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	C17orf78	Q8N4C9	275 aa		13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	PIGC	Q92535	297 aa		13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	CMBL	Q96DG6	245 aa		13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	C14orf144	Q96I85	54 aa		13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	SFXN3	Q9BWM7	321 aa		13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	HRH4	Q9H3N8	390 aa		13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	BANF2	Q9H503	90 aa		13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	DNAJB11	Q9UBS4	358 aa		13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	FAM230A	A0A1W2PPH8	454 aa		13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	FAM157A	C9JC47	383 aa		13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	PRRG2	O14669	202 aa		13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	AGFG2	O95081	481 aa		13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	MPIG6B	O95866	241 aa		13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	ZNF735	P0CB33	412 aa		13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	HIST1H1B	P16401	226 aa	Known RBP	13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	MTCP1	P56278	107 aa		13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	PKIA	P61925	76 aa		13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	ZNF260	Q3ZCT1	412 aa		13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	BTNL8	Q6UX41	500 aa		13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	GFRAL	Q6UXV0	394 aa		13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	LHFPL2	Q6ZUX7	228 aa		13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	BHLHA15	Q7RTS1	189 aa	Predicted RBP	13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	BPIFB2	Q8N4F0	458 aa		13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	OR8S1	Q8NH09	359 aa		13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	AQP3	Q92482	292 aa		13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	SEC22A	Q96IW7	307 aa		13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	C2orf88	Q9BSF0	95 aa		13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	FGF23	Q9GZV9	251 aa	Predicted RBP	13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	OR51B6	Q9H340	312 aa		13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	ZMAT3	Q9HA38	289 aa	Known RBP	13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	GAR1	Q9NY12	217 aa	Known RBP	13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	FAM96B	Q9Y3D0	163 aa		13.19	□□□□□ -0.3
DDX39A-209	ENST00000589318	OR5H1	A6NKK0	313 aa		13.18	□□□□□ -0.3
DDX39A-209	ENST00000589318	ZNF850	A8MQ14	1090 aa		13.18	□□□□□ -0.3
DDX39A-209	ENST00000589318		J3QW42	95 aa		13.18	□□□□□ -0.3
DDX39A-209	ENST00000589318	SMPD2	O60906	423 aa		13.18	□□□□□ -0.3
DDX39A-209	ENST00000589318	DUS4L	O95620	317 aa	Known RBP	13.18	□□□□□ -0.3
DDX39A-209	ENST00000589318	PET100	P0DJ07	73 aa		13.18	□□□□□ -0.3
DDX39A-209	ENST00000589318	SFTPC	P11686	197 aa		13.18	□□□□□ -0.3
DDX39A-209	ENST00000589318	SULT1A2	P50226	295 aa		13.18	□□□□□ -0.3
DDX39A-209	ENST00000589318	SLC22A6	Q4U2R8	563 aa		13.18	□□□□□ -0.3
DDX39A-209	ENST00000589318	OR1J1	Q8NGS3	322 aa		13.18	□□□□□ -0.3
DDX39A-209	ENST00000589318	SEH1L	Q96EE3	360 aa		13.18	□□□□□ -0.3
DDX39A-209	ENST00000589318	TMEM68	Q96MH6	324 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms