RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 RFT1Q96AA3 541 aa16.94■□□□□ 0.3
CAPNS1-205ENST00000588780 KCTD7Q96MP8 289 aa16.94■□□□□ 0.3
CAPNS1-205ENST00000588780 PPIL3Q9H2H8 161 aaKnown RBP16.94■□□□□ 0.3
CAPNS1-205ENST00000588780 GHITMQ9H3K2 345 aa16.94■□□□□ 0.3
CAPNS1-205ENST00000588780 NEK6Q9HC98 313 aa16.94■□□□□ 0.3
CAPNS1-205ENST00000588780 CALYQ9NYX4 217 aa16.94■□□□□ 0.3
CAPNS1-205ENST00000588780 IDI2-AS1Q9NZ38 188 aa16.94■□□□□ 0.3
CAPNS1-205ENST00000588780 A0A1W2PPE3 182 aa16.93■□□□□ 0.3
CAPNS1-205ENST00000588780 HSPB6O14558 160 aa16.93■□□□□ 0.3
CAPNS1-205ENST00000588780 DEGS1O15121 323 aa16.93■□□□□ 0.3
CAPNS1-205ENST00000588780 GAPDHP04406 335 aaKnown RBP16.93■□□□□ 0.3
CAPNS1-205ENST00000588780 OSMP13725 252 aa16.93■□□□□ 0.3
CAPNS1-205ENST00000588780 CDK5Q00535 292 aa16.93■□□□□ 0.3
CAPNS1-205ENST00000588780 Q8N9W7 124 aa16.93■□□□□ 0.3
CAPNS1-205ENST00000588780 GNB4Q9HAV0 340 aa16.93■□□□□ 0.3
CAPNS1-205ENST00000588780 VSIG4Q9Y279 399 aa16.93■□□□□ 0.3
CAPNS1-205ENST00000588780 MEIKINA0A087WXM9 373 aa16.92■□□□□ 0.3
CAPNS1-205ENST00000588780 GNGT2O14610 69 aa16.92■□□□□ 0.3
CAPNS1-205ENST00000588780 OR5H8P0DN80 308 aa16.92■□□□□ 0.3
CAPNS1-205ENST00000588780 PSMB8P28062 276 aa16.92■□□□□ 0.3
CAPNS1-205ENST00000588780 C21orf33P30042 268 aaPredicted RBP16.92■□□□□ 0.3
CAPNS1-205ENST00000588780 ASPHD1Q5U4P2 390 aa16.92■□□□□ 0.3
CAPNS1-205ENST00000588780 DEFB107AQ8IZN7 70 aa16.92■□□□□ 0.3
CAPNS1-205ENST00000588780 DNAAF1Q8NEP3 725 aa16.92■□□□□ 0.3
CAPNS1-205ENST00000588780 RFESDQ8TAC1 157 aa16.92■□□□□ 0.3
CAPNS1-205ENST00000588780 ST6GALNAC6Q969X2 333 aa16.92■□□□□ 0.3
CAPNS1-205ENST00000588780 ACTR3BQ9P1U1 418 aa16.92■□□□□ 0.3
CAPNS1-205ENST00000588780 MRM2Q9UI43 246 aaKnown RBP16.92■□□□□ 0.3
CAPNS1-205ENST00000588780 CSMD3Q7Z407 3707 aa16.92■□□□□ 0.3
CAPNS1-205ENST00000588780 IGHV1-3A0A0C4DH29 117 aa16.91■□□□□ 0.3
CAPNS1-205ENST00000588780 IFNA6P05013 189 aa16.91■□□□□ 0.3
CAPNS1-205ENST00000588780 KRT8P05787 483 aa16.91■□□□□ 0.3
CAPNS1-205ENST00000588780 CSN2P05814 226 aa16.91■□□□□ 0.3
CAPNS1-205ENST00000588780 IGHV4-30-4P0DP06 118 aa16.91■□□□□ 0.3
CAPNS1-205ENST00000588780 PRKACBP22694 351 aa16.91■□□□□ 0.3
CAPNS1-205ENST00000588780 SOX6P35712 828 aa16.91■□□□□ 0.3
CAPNS1-205ENST00000588780 ISL1P61371 349 aa16.91■□□□□ 0.3
CAPNS1-205ENST00000588780 GNB1P62873 340 aa16.91■□□□□ 0.3
CAPNS1-205ENST00000588780 PDZK1IP1Q13113 114 aa16.91■□□□□ 0.3
CAPNS1-205ENST00000588780 FAM53AQ6NSI3 398 aaPredicted RBP16.91■□□□□ 0.3
CAPNS1-205ENST00000588780 LHFPL2Q6ZUX7 228 aa16.91■□□□□ 0.3
CAPNS1-205ENST00000588780 CHST4Q8NCG5 386 aa16.91■□□□□ 0.3
CAPNS1-205ENST00000588780 UBE2E2Q96LR5 201 aa16.91■□□□□ 0.3
CAPNS1-205ENST00000588780 HSPB9Q9BQS6 159 aa16.91■□□□□ 0.3
CAPNS1-205ENST00000588780 SPATA25Q9BR10 227 aa16.91■□□□□ 0.3
CAPNS1-205ENST00000588780 CHCHD3Q9NX63 227 aaKnown RBP16.91■□□□□ 0.3
CAPNS1-205ENST00000588780 H2AFY2Q9P0M6 372 aaPredicted RBP16.91■□□□□ 0.3
CAPNS1-205ENST00000588780 HYDINQ4G0P3 5121 aa16.91■□□□□ 0.3
CAPNS1-205ENST00000588780 SLC33A1O00400 549 aaPredicted RBP16.9■□□□□ 0.3
CAPNS1-205ENST00000588780 CST1P01037 141 aa16.9■□□□□ 0.3
CAPNS1-205ENST00000588780 ZP1P60852 638 aa16.9■□□□□ 0.3
CAPNS1-205ENST00000588780 CFHR3Q02985 330 aa16.9■□□□□ 0.3
CAPNS1-205ENST00000588780 EBI3Q14213 229 aa16.9■□□□□ 0.3
CAPNS1-205ENST00000588780 CATSPERDQ86XM0 798 aa16.9■□□□□ 0.3
CAPNS1-205ENST00000588780 SGPP2Q8IWX5 399 aa16.9■□□□□ 0.3
CAPNS1-205ENST00000588780 CCDC54Q8NEL0 328 aa16.9■□□□□ 0.3
CAPNS1-205ENST00000588780 OR5D18Q8NGL1 313 aa16.9■□□□□ 0.3
CAPNS1-205ENST00000588780 OR13A1Q8NGR1 328 aa16.9■□□□□ 0.3
CAPNS1-205ENST00000588780 PP6455Q8WZ26 134 aa16.9■□□□□ 0.3
CAPNS1-205ENST00000588780 S1PR3Q99500 378 aa16.9■□□□□ 0.3
CAPNS1-205ENST00000588780 MNTQ99583 582 aa16.9■□□□□ 0.3
CAPNS1-205ENST00000588780 COMMD4Q9H0A8 199 aa16.9■□□□□ 0.3
CAPNS1-205ENST00000588780 KIF25Q9UIL4 384 aa16.9■□□□□ 0.3
CAPNS1-205ENST00000588780 TCRBV5S2A0A599 114 aa16.89■□□□□ 0.29
CAPNS1-205ENST00000588780 I3L521 148 aa16.89■□□□□ 0.29
CAPNS1-205ENST00000588780 IL1AP01583 271 aa16.89■□□□□ 0.29
CAPNS1-205ENST00000588780 MYF6P23409 242 aa16.89■□□□□ 0.29
CAPNS1-205ENST00000588780 GK3PQ14409 553 aa16.89■□□□□ 0.29
CAPNS1-205ENST00000588780 IZUMO1Q8IYV9 350 aa16.89■□□□□ 0.29
CAPNS1-205ENST00000588780 TBX5Q99593 518 aa16.89■□□□□ 0.29
CAPNS1-205ENST00000588780 OSBPL10Q9BXB5 764 aa16.89■□□□□ 0.29
CAPNS1-205ENST00000588780 KLK15Q9H2R5 256 aa16.89■□□□□ 0.29
CAPNS1-205ENST00000588780 RBMY1BA6NDE4 496 aaKnown RBP16.88■□□□□ 0.29
CAPNS1-205ENST00000588780 RBMY1EA6NEQ0 496 aaKnown RBP16.88■□□□□ 0.29
CAPNS1-205ENST00000588780 MOSP00540 346 aa16.88■□□□□ 0.29
CAPNS1-205ENST00000588780 RBMY1DP0C7P1 496 aaKnown RBP16.88■□□□□ 0.29
CAPNS1-205ENST00000588780 ZNF20P17024 532 aa16.88■□□□□ 0.29
CAPNS1-205ENST00000588780 ATF1P18846 271 aa16.88■□□□□ 0.29
CAPNS1-205ENST00000588780 SLURP1P55000 103 aa16.88■□□□□ 0.29
CAPNS1-205ENST00000588780 ZNF816Q0VGE8 651 aaPredicted RBP16.88■□□□□ 0.29
CAPNS1-205ENST00000588780 SPATS1Q496A3 300 aa16.88■□□□□ 0.29
CAPNS1-205ENST00000588780 DHFR2Q86XF0 187 aa16.88■□□□□ 0.29
CAPNS1-205ENST00000588780 ZNF491Q8N8L2 437 aa16.88■□□□□ 0.29
CAPNS1-205ENST00000588780 MRGPRDQ8TDS7 321 aa16.88■□□□□ 0.29
CAPNS1-205ENST00000588780 ARPC1AQ92747 370 aa16.88■□□□□ 0.29
CAPNS1-205ENST00000588780 DLX4Q92988 240 aaPredicted RBP16.88■□□□□ 0.29
CAPNS1-205ENST00000588780 C10orf35Q96D05 121 aa16.88■□□□□ 0.29
CAPNS1-205ENST00000588780 OR4C12Q96R67 309 aa16.88■□□□□ 0.29
CAPNS1-205ENST00000588780 ELAC2Q9BQ52 826 aaKnown RBP16.88■□□□□ 0.29
CAPNS1-205ENST00000588780 CLN6Q9NWW5 311 aa16.88■□□□□ 0.29
CAPNS1-205ENST00000588780 WSB1Q9Y6I7 421 aa16.88■□□□□ 0.29
CAPNS1-205ENST00000588780 IGKV1-12A0A0C4DH73 117 aa16.87■□□□□ 0.29
CAPNS1-205ENST00000588780 LOC107986453A0A1B0GWG9 222 aa16.87■□□□□ 0.29
CAPNS1-205ENST00000588780 IGKV1D-12P01611 117 aa16.87■□□□□ 0.29
CAPNS1-205ENST00000588780 MNAT1P51948 309 aa16.87■□□□□ 0.29
CAPNS1-205ENST00000588780 PAN3Q58A45 887 aaKnown RBP16.87■□□□□ 0.29
CAPNS1-205ENST00000588780 Q6P435 159 aa16.87■□□□□ 0.29
CAPNS1-205ENST00000588780 BCDIN3DQ7Z5W3 292 aaKnown RBP16.87■□□□□ 0.29
CAPNS1-205ENST00000588780 Q8N6K4 173 aa16.87■□□□□ 0.29
CAPNS1-205ENST00000588780 IL17DQ8TAD2 202 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms