RNA–Protein interactions for RNA: ENST00000588762.5

GHDC-209, Transcript of GH3 domain containing, humanhuman

TSL 1 (best)

Gene GHDC, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-209ENST00000588762 SFXN4Q6P4A7 337 aa12.79□□□□□ -0.36
GHDC-209ENST00000588762 BPIFB2Q8N4F0 458 aa12.79□□□□□ -0.36
GHDC-209ENST00000588762 BARHL1Q9BZE3 327 aa12.79□□□□□ -0.36
GHDC-209ENST00000588762 ING3Q9NXR8 418 aa12.79□□□□□ -0.36
GHDC-209ENST00000588762 ZNF581Q9P0T4 197 aa12.79□□□□□ -0.36
GHDC-209ENST00000588762 PEX16Q9Y5Y5 336 aa12.79□□□□□ -0.36
GHDC-209ENST00000588762 FN1P02751 2386 aaKnown RBP12.79□□□□□ -0.36
GHDC-209ENST00000588762 TRGV10A0A0A0MS01 117 aa12.78□□□□□ -0.36
GHDC-209ENST00000588762 M0R1W7 72 aa12.78□□□□□ -0.36
GHDC-209ENST00000588762 IL1AP01583 271 aa12.78□□□□□ -0.36
GHDC-209ENST00000588762 SRD5A1P18405 259 aa12.78□□□□□ -0.36
GHDC-209ENST00000588762 TGFBR1P36897 503 aa12.78□□□□□ -0.36
GHDC-209ENST00000588762 VBP1P61758 197 aa12.78□□□□□ -0.36
GHDC-209ENST00000588762 FAM189A2Q15884 450 aa12.78□□□□□ -0.36
GHDC-209ENST00000588762 C1orf229Q6ZS94 237 aaPredicted RBP12.78□□□□□ -0.36
GHDC-209ENST00000588762 C1orf122Q6ZSJ8 110 aa12.78□□□□□ -0.36
GHDC-209ENST00000588762 TRAPPC6BQ86SZ2 158 aa12.78□□□□□ -0.36
GHDC-209ENST00000588762 CROCCP3Q8IVE0 287 aa12.78□□□□□ -0.36
GHDC-209ENST00000588762 TPRX1Q8N7U7 411 aa12.78□□□□□ -0.36
GHDC-209ENST00000588762 UPRTQ96BW1 309 aa12.78□□□□□ -0.36
GHDC-209ENST00000588762 NEDD4LQ96PU5 975 aa12.78□□□□□ -0.36
GHDC-209ENST00000588762 TM2D1Q9BX74 207 aa12.78□□□□□ -0.36
GHDC-209ENST00000588762 SIRPDQ9H106 197 aa12.78□□□□□ -0.36
GHDC-209ENST00000588762 RCC2Q9P258 522 aaKnown RBP12.78□□□□□ -0.36
GHDC-209ENST00000588762 RAB22AQ9UL26 194 aa12.78□□□□□ -0.36
GHDC-209ENST00000588762 LINC00312Q9Y6C7 94 aa12.78□□□□□ -0.36
GHDC-209ENST00000588762 NAV3Q8IVL0 2385 aa12.78□□□□□ -0.36
GHDC-209ENST00000588762 TMEM272A0A1B0GTI8 110 aa12.77□□□□□ -0.37
GHDC-209ENST00000588762 ODAMA1E959 279 aa12.77□□□□□ -0.37
GHDC-209ENST00000588762 PDCD6O75340 191 aa12.77□□□□□ -0.37
GHDC-209ENST00000588762 GABARAPO95166 117 aa12.77□□□□□ -0.37
GHDC-209ENST00000588762 GLAP06280 429 aa12.77□□□□□ -0.37
GHDC-209ENST00000588762 RPS19P39019 145 aaKnown RBP12.77□□□□□ -0.37
GHDC-209ENST00000588762 GLIPR1P48060 266 aa12.77□□□□□ -0.37
GHDC-209ENST00000588762 SERPINB10P48595 397 aa12.77□□□□□ -0.37
GHDC-209ENST00000588762 NCS1P62166 190 aa12.77□□□□□ -0.37
GHDC-209ENST00000588762 SCGB2A2Q13296 93 aa12.77□□□□□ -0.37
GHDC-209ENST00000588762 BRICD5Q6PL45 260 aa12.77□□□□□ -0.37
GHDC-209ENST00000588762 METAP1DQ6UB28 335 aaPredicted RBP12.77□□□□□ -0.37
GHDC-209ENST00000588762 SLC16A12Q6ZSM3 486 aa12.77□□□□□ -0.37
GHDC-209ENST00000588762 COQ2Q96H96 371 aa12.77□□□□□ -0.37
GHDC-209ENST00000588762 LPAR5Q9H1C0 372 aa12.77□□□□□ -0.37
GHDC-209ENST00000588762 METTL8Q9H825 291 aaKnown RBP12.77□□□□□ -0.37
GHDC-209ENST00000588762 OR6C3Q9NZP0 311 aa12.77□□□□□ -0.37
GHDC-209ENST00000588762 UBE2J1Q9Y385 318 aaPredicted RBP12.77□□□□□ -0.37
GHDC-209ENST00000588762 MXRA5Q9NR99 2828 aa12.76□□□□□ -0.37
GHDC-209ENST00000588762 MEIKINA0A087WXM9 373 aa12.76□□□□□ -0.37
GHDC-209ENST00000588762 A0A0B4J203 849 aa12.76□□□□□ -0.37
GHDC-209ENST00000588762 MEX3AA1L020 520 aaKnown RBP12.76□□□□□ -0.37
GHDC-209ENST00000588762 LDLRAD4O15165 306 aa12.76□□□□□ -0.37
GHDC-209ENST00000588762 TMEM127O75204 238 aa12.76□□□□□ -0.37
GHDC-209ENST00000588762 ZNF728P0DKX0 622 aa12.76□□□□□ -0.37
GHDC-209ENST00000588762 MMP9P14780 707 aa12.76□□□□□ -0.37
GHDC-209ENST00000588762 CCL3L1P16619 93 aa12.76□□□□□ -0.37
GHDC-209ENST00000588762 RAB6AP20340 208 aa12.76□□□□□ -0.37
GHDC-209ENST00000588762 BLVRBP30043 206 aaPredicted RBP12.76□□□□□ -0.37
GHDC-209ENST00000588762 PAX5Q02548 391 aa12.76□□□□□ -0.37
GHDC-209ENST00000588762 ZNF273Q14593 569 aa12.76□□□□□ -0.37
GHDC-209ENST00000588762 NKAPLQ5M9Q1 402 aa12.76□□□□□ -0.37
GHDC-209ENST00000588762 IDNKQ5T6J7 187 aa12.76□□□□□ -0.37
GHDC-209ENST00000588762 GPR157Q5UAW9 335 aa12.76□□□□□ -0.37
GHDC-209ENST00000588762 SLC35E4Q6ICL7 350 aa12.76□□□□□ -0.37
GHDC-209ENST00000588762 VMO1Q7Z5L0 202 aa12.76□□□□□ -0.37
GHDC-209ENST00000588762 CLVS1Q8IUQ0 354 aaPredicted RBP12.76□□□□□ -0.37
GHDC-209ENST00000588762 OR56B1Q8NGI3 324 aa12.76□□□□□ -0.37
GHDC-209ENST00000588762 PLPPR1Q8TBJ4 325 aa12.76□□□□□ -0.37
GHDC-209ENST00000588762 PTX4Q96A99 478 aa12.76□□□□□ -0.37
GHDC-209ENST00000588762 ZNF714Q96N38 554 aa12.76□□□□□ -0.37
GHDC-209ENST00000588762 TBX15Q96SF7 602 aa12.76□□□□□ -0.37
GHDC-209ENST00000588762 NICN1Q9BSH3 213 aa12.76□□□□□ -0.37
GHDC-209ENST00000588762 NAA50Q9GZZ1 169 aaKnown RBP12.76□□□□□ -0.37
GHDC-209ENST00000588762 GAL3ST2Q9H3Q3 398 aa12.76□□□□□ -0.37
GHDC-209ENST00000588762 NCOR1P1Q9H4R4 102 aa12.76□□□□□ -0.37
GHDC-209ENST00000588762 KIF25Q9UIL4 384 aa12.76□□□□□ -0.37
GHDC-209ENST00000588762 SETD2Q9BYW2 2564 aaPredicted RBP12.76□□□□□ -0.37
GHDC-209ENST00000588762 TRAV40A0A0B4J280 105 aa12.75□□□□□ -0.37
GHDC-209ENST00000588762 TMEM30CPA0ZSE6 113 aa12.75□□□□□ -0.37
GHDC-209ENST00000588762 UBE2QL1A1L167 161 aa12.75□□□□□ -0.37
GHDC-209ENST00000588762 METTL21EPA6NDL7 271 aa12.75□□□□□ -0.37
GHDC-209ENST00000588762 NOL3O60936 208 aaKnown RBP12.75□□□□□ -0.37
GHDC-209ENST00000588762 RBP4P02753 201 aa12.75□□□□□ -0.37
GHDC-209ENST00000588762 FAM157CP0CG43 387 aa12.75□□□□□ -0.37
GHDC-209ENST00000588762 CHATP28329 748 aa12.75□□□□□ -0.37
GHDC-209ENST00000588762 VEGFCP49767 419 aa12.75□□□□□ -0.37
GHDC-209ENST00000588762 SCAND1P57086 179 aa12.75□□□□□ -0.37
GHDC-209ENST00000588762 CTF1Q16619 201 aa12.75□□□□□ -0.37
GHDC-209ENST00000588762 RSBN1Q5VWQ0 802 aaPredicted RBP12.75□□□□□ -0.37
GHDC-209ENST00000588762 SIGIRRQ6IA17 410 aa12.75□□□□□ -0.37
GHDC-209ENST00000588762 FAM89BQ8N5H3 189 aa12.75□□□□□ -0.37
GHDC-209ENST00000588762 Q8N7P7 452 aa12.75□□□□□ -0.37
GHDC-209ENST00000588762 ZNF565Q8N9K5 539 aa12.75□□□□□ -0.37
GHDC-209ENST00000588762 CORO2AQ92828 525 aa12.75□□□□□ -0.37
GHDC-209ENST00000588762 SIRT7Q9NRC8 400 aa12.75□□□□□ -0.37
GHDC-209ENST00000588762 PLEKHJ1Q9NW61 149 aa12.75□□□□□ -0.37
GHDC-209ENST00000588762 ETAA1Q9NY74 926 aa12.75□□□□□ -0.37
GHDC-209ENST00000588762 TAS2R3Q9NYW6 316 aa12.75□□□□□ -0.37
GHDC-209ENST00000588762 NUP50Q9UKX7 468 aa12.75□□□□□ -0.37
GHDC-209ENST00000588762 SOCS1O15524 211 aa12.74□□□□□ -0.37
GHDC-209ENST00000588762 CA11O75493 328 aa12.74□□□□□ -0.37
GHDC-209ENST00000588762 FSHBP01225 129 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms