RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 ADAT1Q9BUB4 502 aaKnown RBP12.55□□□□□ -0.4
CCDC43-203ENST00000588210 SF3B5Q9BWJ5 86 aaKnown RBP12.55□□□□□ -0.4
CCDC43-203ENST00000588210 RHOFQ9HBH0 211 aa12.55□□□□□ -0.4
CCDC43-203ENST00000588210 TAF9BQ9HBM6 251 aa12.55□□□□□ -0.4
CCDC43-203ENST00000588210 PLSCR4Q9NRQ2 329 aa12.55□□□□□ -0.4
CCDC43-203ENST00000588210 GPR173Q9NS66 373 aa12.55□□□□□ -0.4
CCDC43-203ENST00000588210 HSF4Q9ULV5 492 aa12.55□□□□□ -0.4
CCDC43-203ENST00000588210 PROCRQ9UNN8 238 aa12.55□□□□□ -0.4
CCDC43-203ENST00000588210 DOPEY2Q9Y3R5 2298 aa12.55□□□□□ -0.4
CCDC43-203ENST00000588210 SPTBN1Q01082 2364 aaKnown RBP12.55□□□□□ -0.4
CCDC43-203ENST00000588210 DEDDO75618 318 aa12.55□□□□□ -0.4
CCDC43-203ENST00000588210 CST4P01036 141 aa12.55□□□□□ -0.4
CCDC43-203ENST00000588210 CGAP01215 116 aa12.55□□□□□ -0.4
CCDC43-203ENST00000588210 FAM219AQ8IW50 185 aa12.55□□□□□ -0.4
CCDC43-203ENST00000588210 METTL9Q9H1A3 318 aa12.55□□□□□ -0.4
CCDC43-203ENST00000588210 TMEM231Q9H6L2 316 aa12.55□□□□□ -0.4
CCDC43-203ENST00000588210 A8MXE2 369 aa12.54□□□□□ -0.4
CCDC43-203ENST00000588210 TMEM225BP0DP42 221 aa12.54□□□□□ -0.4
CCDC43-203ENST00000588210 MUC1P15941 1255 aaPredicted RBP12.54□□□□□ -0.4
CCDC43-203ENST00000588210 RCC1P18754 421 aaPredicted RBP12.54□□□□□ -0.4
CCDC43-203ENST00000588210 PVALBP20472 110 aaPredicted RBP12.54□□□□□ -0.4
CCDC43-203ENST00000588210 DTYMKP23919 212 aa12.54□□□□□ -0.4
CCDC43-203ENST00000588210 LPAR6P43657 344 aa12.54□□□□□ -0.4
CCDC43-203ENST00000588210 SMCO1Q147U7 214 aa12.54□□□□□ -0.4
CCDC43-203ENST00000588210 CNN3Q15417 329 aaKnown RBP12.54□□□□□ -0.4
CCDC43-203ENST00000588210 CBLN2Q8IUK8 224 aa12.54□□□□□ -0.4
CCDC43-203ENST00000588210 HDHD3Q9BSH5 251 aaPredicted RBP12.54□□□□□ -0.4
CCDC43-203ENST00000588210 HRH4Q9H3N8 390 aa12.54□□□□□ -0.4
CCDC43-203ENST00000588210 RCC2Q9P258 522 aaKnown RBP12.54□□□□□ -0.4
CCDC43-203ENST00000588210 K7EPK0 472 aa12.53□□□□□ -0.4
CCDC43-203ENST00000588210 MED6O75586 246 aa12.53□□□□□ -0.4
CCDC43-203ENST00000588210 IFNA21P01568 189 aa12.53□□□□□ -0.4
CCDC43-203ENST00000588210 ACKR3P25106 362 aa12.53□□□□□ -0.4
CCDC43-203ENST00000588210 RPL12P30050 165 aaKnown RBP12.53□□□□□ -0.4
CCDC43-203ENST00000588210 MTCP1P56278 107 aa12.53□□□□□ -0.4
CCDC43-203ENST00000588210 GPR137CQ8N3F9 429 aa12.53□□□□□ -0.4
CCDC43-203ENST00000588210 FAM71E2Q8N5Q1 922 aa12.53□□□□□ -0.4
CCDC43-203ENST00000588210 PARP11Q9NR21 331 aa12.53□□□□□ -0.4
CCDC43-203ENST00000588210 SYNGR3O43761 229 aa12.53□□□□□ -0.4
CCDC43-203ENST00000588210 HEXAP06865 529 aa12.53□□□□□ -0.4
CCDC43-203ENST00000588210 OR5H8P0DN80 308 aa12.53□□□□□ -0.4
CCDC43-203ENST00000588210 NPBWR1P48145 328 aa12.53□□□□□ -0.4
CCDC43-203ENST00000588210 GGNBP1Q5YKI7 109 aa12.53□□□□□ -0.4
CCDC43-203ENST00000588210 BTNL8Q6UX41 500 aa12.53□□□□□ -0.4
CCDC43-203ENST00000588210 ASCL4Q6XD76 172 aa12.53□□□□□ -0.4
CCDC43-203ENST00000588210 NUFIP2Q7Z417 695 aaKnown RBP12.53□□□□□ -0.4
CCDC43-203ENST00000588210 FOXRED2Q8IWF2 684 aa12.53□□□□□ -0.4
CCDC43-203ENST00000588210 LINC00518Q8N0U6 118 aa12.53□□□□□ -0.4
CCDC43-203ENST00000588210 RNASE6Q93091 150 aaKnown RBP12.53□□□□□ -0.4
CCDC43-203ENST00000588210 MRPL24Q96A35 216 aaKnown RBP12.53□□□□□ -0.4
CCDC43-203ENST00000588210 REEP6Q96HR9 211 aa12.53□□□□□ -0.4
CCDC43-203ENST00000588210 NECAP2Q9NVZ3 263 aa12.53□□□□□ -0.4
CCDC43-203ENST00000588210 FBXL17Q9UF56 701 aa12.53□□□□□ -0.4
CCDC43-203ENST00000588210 AK3Q9UIJ7 227 aa12.53□□□□□ -0.4
CCDC43-203ENST00000588210 FAM96BQ9Y3D0 163 aa12.53□□□□□ -0.4
CCDC43-203ENST00000588210 POMT1Q9Y6A1 747 aa12.53□□□□□ -0.4
CCDC43-203ENST00000588210 BAHCC1Q9P281 2608 aa12.53□□□□□ -0.4
CCDC43-203ENST00000588210 ICE1Q9Y2F5 2266 aa12.52□□□□□ -0.4
CCDC43-203ENST00000588210 SGCEO43556 437 aa12.52□□□□□ -0.4
CCDC43-203ENST00000588210 JTBO76095 146 aa12.52□□□□□ -0.4
CCDC43-203ENST00000588210 CST2P09228 141 aa12.52□□□□□ -0.4
CCDC43-203ENST00000588210 CHATP28329 748 aa12.52□□□□□ -0.4
CCDC43-203ENST00000588210 GRNP28799 593 aaKnown RBP12.52□□□□□ -0.4
CCDC43-203ENST00000588210 FCGR2CP31995 323 aa12.52□□□□□ -0.4
CCDC43-203ENST00000588210 RSU1Q15404 277 aa12.52□□□□□ -0.4
CCDC43-203ENST00000588210 KRTAP27-1Q3LI81 207 aa12.52□□□□□ -0.4
CCDC43-203ENST00000588210 ZNF610Q8N9Z0 462 aa12.52□□□□□ -0.4
CCDC43-203ENST00000588210 ZNF837Q96EG3 531 aaPredicted RBP12.52□□□□□ -0.4
CCDC43-203ENST00000588210 OPN3Q9H1Y3 402 aaPredicted RBP12.52□□□□□ -0.4
CCDC43-203ENST00000588210 LIME1Q9H400 295 aa12.52□□□□□ -0.4
CCDC43-203ENST00000588210 C12orf49Q9H741 205 aa12.52□□□□□ -0.4
CCDC43-203ENST00000588210 ZFP57Q9NU63 452 aa12.52□□□□□ -0.4
CCDC43-203ENST00000588210 AMDHD2Q9Y303 409 aa12.52□□□□□ -0.4
CCDC43-203ENST00000588210 NOSIPQ9Y314 301 aaKnown RBP12.52□□□□□ -0.4
CCDC43-203ENST00000588210 HCFC1P51610 2035 aa12.52□□□□□ -0.41
CCDC43-203ENST00000588210 IGKV1-27A0A075B6S5 117 aa12.52□□□□□ -0.41
CCDC43-203ENST00000588210 RNASEK-C17orf49H0YIS7 233 aa12.52□□□□□ -0.41
CCDC43-203ENST00000588210 C19orf84I3L1E1 186 aa12.52□□□□□ -0.41
CCDC43-203ENST00000588210 F12P00748 615 aaPredicted RBP12.52□□□□□ -0.41
CCDC43-203ENST00000588210 CD5P06127 495 aa12.52□□□□□ -0.41
CCDC43-203ENST00000588210 FCGR3AP08637 254 aa12.52□□□□□ -0.41
CCDC43-203ENST00000588210 F2RL1P55085 397 aa12.52□□□□□ -0.41
CCDC43-203ENST00000588210 SP5Q6BEB4 398 aaPredicted RBP12.52□□□□□ -0.41
CCDC43-203ENST00000588210 DHRS11Q6UWP2 260 aa12.52□□□□□ -0.41
CCDC43-203ENST00000588210 BEND4Q6ZU67 534 aa12.52□□□□□ -0.41
CCDC43-203ENST00000588210 LHFPL2Q6ZUX7 228 aa12.52□□□□□ -0.41
CCDC43-203ENST00000588210 OR2AE1Q8NHA4 323 aa12.52□□□□□ -0.41
CCDC43-203ENST00000588210 OR1F12Q8NHA8 337 aa12.52□□□□□ -0.41
CCDC43-203ENST00000588210 GALNT14Q96FL9 552 aa12.52□□□□□ -0.41
CCDC43-203ENST00000588210 CMSS1Q9BQ75 279 aaKnown RBP12.52□□□□□ -0.41
CCDC43-203ENST00000588210 FAAP24Q9BTP7 215 aa12.52□□□□□ -0.41
CCDC43-203ENST00000588210 SAV1Q9H4B6 383 aaPredicted RBP12.52□□□□□ -0.41
CCDC43-203ENST00000588210 NAA60Q9H7X0 242 aa12.52□□□□□ -0.41
CCDC43-203ENST00000588210 PLEKHA2Q9HB19 425 aa12.52□□□□□ -0.41
CCDC43-203ENST00000588210 ELOVL5Q9NYP7 299 aa12.52□□□□□ -0.41
CCDC43-203ENST00000588210 MLXQ9UH92 298 aa12.52□□□□□ -0.41
CCDC43-203ENST00000588210 ANGPTL7O43827 346 aa12.51□□□□□ -0.41
CCDC43-203ENST00000588210 FBXO24O75426 580 aa12.51□□□□□ -0.41
CCDC43-203ENST00000588210 HGFACQ04756 655 aa12.51□□□□□ -0.41
CCDC43-203ENST00000588210 TAF9Q16594 264 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms