RNA–Protein interactions for RNA: ENST00000587206.1

ABCA8-209, Transcript of ATP binding cassette subfamily A member 8, human

TSL 5

Gene ABCA8, Length 925 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA8-209	ENST00000587206	CXCL17	Q6UXB2	119 aa		4.37	□□□□□ -1.71
ABCA8-209	ENST00000587206	TOMM20L	Q6UXN7	152 aa		4.37	□□□□□ -1.71
ABCA8-209	ENST00000587206	C4orf22	Q6V702	233 aa		4.37	□□□□□ -1.71
ABCA8-209	ENST00000587206	GDPGP1	Q6ZNW5	385 aa		4.37	□□□□□ -1.71
ABCA8-209	ENST00000587206	NOTCH2NL	Q7Z3S9	236 aa		4.37	□□□□□ -1.71
ABCA8-209	ENST00000587206	SLC22A18AS	Q8N1D0	253 aa		4.37	□□□□□ -1.71
ABCA8-209	ENST00000587206	ZCCHC24	Q8N2G6	241 aa	Known RBP	4.37	□□□□□ -1.71
ABCA8-209	ENST00000587206	NUP37	Q8NFH4	326 aa		4.37	□□□□□ -1.71
ABCA8-209	ENST00000587206	ZNF420	Q8TAQ5	688 aa	Predicted RBP	4.37	□□□□□ -1.71
ABCA8-209	ENST00000587206	DNAJC9	Q8WXX5	260 aa		4.37	□□□□□ -1.71
ABCA8-209	ENST00000587206	TMEM159	Q96B96	161 aa		4.37	□□□□□ -1.71
ABCA8-209	ENST00000587206	TM4SF18	Q96CE8	201 aa		4.37	□□□□□ -1.71
ABCA8-209	ENST00000587206	GALNT14	Q96FL9	552 aa		4.37	□□□□□ -1.71
ABCA8-209	ENST00000587206	MRPL48	Q96GC5	212 aa	Known RBP	4.37	□□□□□ -1.71
ABCA8-209	ENST00000587206	AURKB	Q96GD4	344 aa	Predicted RBP	4.37	□□□□□ -1.71
ABCA8-209	ENST00000587206	FOPNL	Q96NB1	174 aa		4.37	□□□□□ -1.71
ABCA8-209	ENST00000587206	SPACA5	Q96QH8	159 aa		4.37	□□□□□ -1.71
ABCA8-209	ENST00000587206	OR2A7	Q96R45	310 aa		4.37	□□□□□ -1.71
ABCA8-209	ENST00000587206	VPS25	Q9BRG1	176 aa		4.37	□□□□□ -1.71
ABCA8-209	ENST00000587206	CLEC7A	Q9BXN2	247 aa		4.37	□□□□□ -1.71
ABCA8-209	ENST00000587206	KRTAP1-5	Q9BYS1	174 aa		4.37	□□□□□ -1.71
ABCA8-209	ENST00000587206	FAM96A	Q9H5X1	160 aa		4.37	□□□□□ -1.71
ABCA8-209	ENST00000587206	HEBP1	Q9NRV9	189 aa		4.37	□□□□□ -1.71
ABCA8-209	ENST00000587206	C14orf105	Q9NVL8	296 aa		4.37	□□□□□ -1.71
ABCA8-209	ENST00000587206	GLS2	Q9UI32	602 aa		4.37	□□□□□ -1.71
ABCA8-209	ENST00000587206	SIGLEC7	Q9Y286	467 aa		4.37	□□□□□ -1.71
ABCA8-209	ENST00000587206	SLC25A15	Q9Y619	301 aa		4.37	□□□□□ -1.71
ABCA8-209	ENST00000587206	WSB1	Q9Y6I7	421 aa		4.37	□□□□□ -1.71
ABCA8-209	ENST00000587206	CCNB3	Q8WWL7	1395 aa		4.37	□□□□□ -1.71
ABCA8-209	ENST00000587206	SETD5	Q9C0A6	1442 aa		4.37	□□□□□ -1.71
ABCA8-209	ENST00000587206	GREB1L	Q9C091	1923 aa	Predicted RBP	4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	TRAV9-2	A0A087WT02	112 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206		A0A087WWV3	80 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	SMIM26	A0A096LP01	95 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	TMX2-CTNND1	H3BSU7	103 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	HMGB3	O15347	200 aa	Known RBP	4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	PFDN1	O60925	122 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	BPGM	P07738	259 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	SDC4	P31431	198 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	CDKN2B	P42772	138 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	P2RX1	P51575	399 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	CCL23	P55773	120 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	C1QTNF8	P60827	252 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	DEFA6	Q01524	100 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	CD47	Q08722	323 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	AKR1C8P	Q5T2L2	129 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	TMEM236	Q5W0B7	351 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	NANOGP8	Q6NSW7	305 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	FBXL22	Q6P050	247 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	ZNF550	Q7Z398	422 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	DOLPP1	Q86YN1	238 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	OR52L1	Q8NGH7	329 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	ZNF519	Q8TB69	540 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	CCL17	Q92583	94 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	L3HYPDH	Q96EM0	354 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	SMIM8	Q96KF7	97 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	DNAJC30	Q96LL9	226 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	C12orf57	Q99622	126 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	CCDC32	Q9BV29	185 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	EBPL	Q9BY08	206 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	GNB1L	Q9BYB4	327 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	SLC17A9	Q9BYT1	436 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	OCR1	Q9BZK8	76 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	RNASE7	Q9H1E1	156 aa	Known RBP	4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	NANOG	Q9H9S0	305 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	PLSCR3	Q9NRY6	295 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	RBFOX1	Q9NWB1	397 aa	Known RBP	4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	MRPL27	Q9P0M9	148 aa	Known RBP	4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	NEU3	Q9UQ49	428 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	PSG8	Q9UQ74	426 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	HDGFL3	Q9Y3E1	203 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	ASTN1	O14525	1302 aa		4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206	YTHDC2	Q9H6S0	1430 aa	Known RBP	4.36	□□□□□ -1.71
ABCA8-209	ENST00000587206		A0A0J9YXV3	536 aa		4.35	□□□□□ -1.71
ABCA8-209	ENST00000587206	FAM236D	A0A1B0GTK5	79 aa		4.35	□□□□□ -1.71
ABCA8-209	ENST00000587206		A0A1W2PRE2	83 aa		4.35	□□□□□ -1.71
ABCA8-209	ENST00000587206	NTN3	O00634	580 aa	Predicted RBP	4.35	□□□□□ -1.71
ABCA8-209	ENST00000587206	CCDC22	O60826	627 aa		4.35	□□□□□ -1.71
ABCA8-209	ENST00000587206	GCM2	O75603	506 aa	Predicted RBP	4.35	□□□□□ -1.71
ABCA8-209	ENST00000587206	NTN1	O95631	604 aa		4.35	□□□□□ -1.71
ABCA8-209	ENST00000587206	HBZ	P02008	142 aa		4.35	□□□□□ -1.71
ABCA8-209	ENST00000587206	FAM236C	P0DP71	79 aa		4.35	□□□□□ -1.71
ABCA8-209	ENST00000587206	NELFE	P18615	380 aa	Known RBP	4.35	□□□□□ -1.71
ABCA8-209	ENST00000587206	MARK3	P27448	753 aa		4.35	□□□□□ -1.71
ABCA8-209	ENST00000587206	DDT	P30046	118 aa		4.35	□□□□□ -1.71
ABCA8-209	ENST00000587206	IL2RG	P31785	369 aa		4.35	□□□□□ -1.71
ABCA8-209	ENST00000587206	CA5A	P35218	305 aa		4.35	□□□□□ -1.71
ABCA8-209	ENST00000587206	GLRX	P35754	106 aa		4.35	□□□□□ -1.71
ABCA8-209	ENST00000587206	MAP2K4	P45985	399 aa		4.35	□□□□□ -1.71
ABCA8-209	ENST00000587206	NCBP2	P52298	156 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
ABCA8-209	ENST00000587206	TCP10	Q12799	353 aa		4.35	□□□□□ -1.71
ABCA8-209	ENST00000587206	KIAA0087	Q14695	138 aa		4.35	□□□□□ -1.71
ABCA8-209	ENST00000587206	HERPUD1	Q15011	391 aa		4.35	□□□□□ -1.71
ABCA8-209	ENST00000587206	IAH1	Q2TAA2	248 aa	Predicted RBP	4.35	□□□□□ -1.71
ABCA8-209	ENST00000587206	TCTEX1D4	Q5JR98	221 aa		4.35	□□□□□ -1.71
ABCA8-209	ENST00000587206	SLC25A30	Q5SVS4	291 aa		4.35	□□□□□ -1.71
ABCA8-209	ENST00000587206	FBXW9	Q5XUX1	488 aa		4.35	□□□□□ -1.71
ABCA8-209	ENST00000587206	SCGB1D4	Q6XE38	83 aa		4.35	□□□□□ -1.71
ABCA8-209	ENST00000587206	LINC00173	Q6ZV60	143 aa		4.35	□□□□□ -1.71
ABCA8-209	ENST00000587206	OOSP2	Q86WS3	158 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms