RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	SLC34A1	Q06495	639 aa		10.17	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	SCN1B	Q07699	218 aa		10.17	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	FAM189A2	Q15884	450 aa		10.17	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	SSX2	Q16385	188 aa		10.17	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	MPV17L	Q2QL34	196 aa		10.17	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	PAN3	Q58A45	887 aa	Known RBP	10.17	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	DDI2	Q5TDH0	399 aa		10.17	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	C16orf82	Q7Z2V1	217 aa		10.17	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	ABHD12	Q8N2K0	398 aa		10.17	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	OSR2	Q8N2R0	312 aa		10.17	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	STX19	Q8N4C7	294 aa		10.17	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	OR10A7	Q8NGE5	316 aa		10.17	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	NDNF	Q8TB73	568 aa		10.17	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	COQ2	Q96H96	371 aa		10.17	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	PGLYRP3	Q96LB9	341 aa		10.17	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	TCF7L1	Q9HCS4	588 aa		10.17	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	FKBP14	Q9NWM8	211 aa		10.17	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	DPM3	Q9P2X0	92 aa		10.17	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	FOXJ3	Q9UPW0	622 aa		10.17	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	ERGIC3	Q9Y282	383 aa		10.17	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	TRBV5-7	A0A0A0MS05	114 aa		10.16	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	TRAV24	A0A0B4J272	114 aa		10.16	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708		A6NDX4	124 aa		10.16	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	FAM90A22P	A8MWA6	464 aa		10.16	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	LEUTX	A8MZ59	168 aa		10.16	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	LALBA	P00709	142 aa		10.16	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	IGLV1-47	P01700	117 aa		10.16	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	CSTB	P04080	98 aa	Known RBP	10.16	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	CGB3	P0DN86	165 aa		10.16	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	CGB7	P0DN87	165 aa		10.16	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	BRS3	P32247	399 aa		10.16	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	EFNB2	P52799	333 aa		10.16	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	PRRX1	P54821	245 aa		10.16	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	RPS11	P62280	158 aa	Known RBP eCLIP	10.16	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	LY6E	Q16553	131 aa		10.16	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	LAIR2	Q6ISS4	152 aa		10.16	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	CCDC144NL	Q6NUI1	221 aa		10.16	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708		Q8N2B8	174 aa		10.16	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	NANOGP1	Q8N7R0	232 aa		10.16	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	OR4P4	Q8NGL7	312 aa		10.16	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	AKR1E2	Q96JD6	320 aa		10.16	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	FAM192A	Q9GZU8	254 aa		10.16	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	MMP27	Q9H306	513 aa		10.16	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	SPACA1	Q9HBV2	294 aa		10.16	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	ST3GAL6	Q9Y274	331 aa		10.16	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	MEGF11	A6BM72	1044 aa		10.15	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	F2RL2	O00254	374 aa		10.15	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	TOR1A	O14656	332 aa		10.15	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	HTR3B	O95264	441 aa		10.15	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	GTF2F2	P13984	249 aa		10.15	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	GZMH	P20718	246 aa		10.15	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	OR3A4P	P47883	348 aa		10.15	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	RBM11	P57052	281 aa	Known RBP	10.15	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	KRTAP10-3	P60369	221 aa		10.15	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	DOC2B	Q14184	412 aa		10.15	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	ATXN7L3	Q14CW9	347 aa	Predicted RBP	10.15	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	LDLRAD2	Q5SZI1	272 aa		10.15	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	AHSA2	Q719I0	299 aa		10.15	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	DYNAP	Q8N1N2	210 aa		10.15	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	MS4A15	Q8N5U1	240 aa		10.15	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	NKAIN3	Q8N8D7	197 aa		10.15	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	BPIFB6	Q8NFQ5	453 aa		10.15	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	MYDGF	Q969H8	173 aa		10.15	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	NR1H4	Q96RI1	486 aa	Predicted RBP	10.15	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	ZNF184	Q99676	751 aa	Predicted RBP	10.15	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	SCN3B	Q9NY72	215 aa		10.15	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	10.15	□□□□□ -0.78
CDK5RAP3-222	ENST00000581708	TRRAP	Q9Y4A5	3859 aa		10.15	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	WNK1	Q9H4A3	2382 aa		10.15	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	KIAA2026	Q5HYC2	2103 aa		10.15	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	NOTCH1	P46531	2555 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	MEIKIN	A0A087WXM9	373 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	MEX3A	A1L020	520 aa	Known RBP	10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	FAM90A10P	A6NDY2	464 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	FAM90A18P	A6NE21	464 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	FAM90A16P	A6NEW6	464 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	FAM90A20P	A6NIJ5	464 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	FAM90A7P	A6NKC0	464 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	FAM90A12P	A8MX19	464 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	FAM90A5P	A8MXJ8	464 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	FAM90A23P	A8MXZ1	464 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	NPIPB11	E5RHQ5	1161 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	XPNPEP2	O43895	674 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	CHST1	O43916	411 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	MMP23A	O75900	390 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	CDRT1	O95170	752 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	IL1A	P01583	271 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	FAM90A15P	P0C7V4	464 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	FAM90A13P	P0C7W8	464 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	FAM90A14P	P0C7W9	464 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	FAM90A24P	P0C7X0	464 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	CEL	P19835	753 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	SRSF4	Q08170	494 aa	Known RBP	10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	GPR50	Q13585	617 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	HERPUD1	Q15011	391 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	C17orf58	Q2M2W7	97 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	C2orf68	Q2NKX9	166 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	HLA-DRB5	Q30154	266 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	C6orf141	Q5SZD1	244 aa		10.14	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	PRAMEF5	Q5TYX0	476 aa		10.14	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms