RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 TCF23Q7RTU1 214 aa16.93■□□□□ 0.3
CCDC42-203ENST00000581598 CEACAM19Q7Z692 300 aa16.93■□□□□ 0.3
CCDC42-203ENST00000581598 CLVS1Q8IUQ0 354 aaPredicted RBP16.93■□□□□ 0.3
CCDC42-203ENST00000581598 EMG1Q92979 244 aaKnown RBP16.93■□□□□ 0.3
CCDC42-203ENST00000581598 TMEM106AQ96A25 262 aa16.93■□□□□ 0.3
CCDC42-203ENST00000581598 MALSU1Q96EH3 234 aa16.93■□□□□ 0.3
CCDC42-203ENST00000581598 BCL7BQ9BQE9 202 aa16.93■□□□□ 0.3
CCDC42-203ENST00000581598 CHCHD6Q9BRQ6 235 aa16.93■□□□□ 0.3
CCDC42-203ENST00000581598 TXNL4BQ9NX01 149 aaKnown RBP16.93■□□□□ 0.3
CCDC42-203ENST00000581598 hADV38S2A0JD32 116 aa16.92■□□□□ 0.3
CCDC42-203ENST00000581598 MEGF11A6BM72 1044 aa16.92■□□□□ 0.3
CCDC42-203ENST00000581598 A6NHS1 94 aa16.92■□□□□ 0.3
CCDC42-203ENST00000581598 TSPAN15O95858 294 aa16.92■□□□□ 0.3
CCDC42-203ENST00000581598 HAND1O96004 215 aa16.92■□□□□ 0.3
CCDC42-203ENST00000581598 CYB5AP00167 134 aa16.92■□□□□ 0.3
CCDC42-203ENST00000581598 CD2P06729 351 aa16.92■□□□□ 0.3
CCDC42-203ENST00000581598 ATF1P18846 271 aa16.92■□□□□ 0.3
CCDC42-203ENST00000581598 PAX6P26367 422 aa16.92■□□□□ 0.3
CCDC42-203ENST00000581598 SOX2P48431 317 aa16.92■□□□□ 0.3
CCDC42-203ENST00000581598 TMBIM6P55061 237 aa16.92■□□□□ 0.3
CCDC42-203ENST00000581598 CTF1Q16619 201 aa16.92■□□□□ 0.3
CCDC42-203ENST00000581598 Q6ZTK2 550 aa16.92■□□□□ 0.3
CCDC42-203ENST00000581598 LHFPL2Q6ZUX7 228 aa16.92■□□□□ 0.3
CCDC42-203ENST00000581598 LHFPL4Q7Z7J7 247 aa16.92■□□□□ 0.3
CCDC42-203ENST00000581598 OR2T6Q8NHC8 308 aa16.92■□□□□ 0.3
CCDC42-203ENST00000581598 SPSB1Q96BD6 273 aa16.92■□□□□ 0.3
CCDC42-203ENST00000581598 ZNF714Q96N38 554 aa16.92■□□□□ 0.3
CCDC42-203ENST00000581598 NPFFR1Q9GZQ6 430 aa16.92■□□□□ 0.3
CCDC42-203ENST00000581598 PPIL3Q9H2H8 161 aaKnown RBP16.92■□□□□ 0.3
CCDC42-203ENST00000581598 BATF3Q9NR55 127 aa16.92■□□□□ 0.3
CCDC42-203ENST00000581598 NDUFA13Q9P0J0 144 aa16.92■□□□□ 0.3
CCDC42-203ENST00000581598 LINC00312Q9Y6C7 94 aa16.92■□□□□ 0.3
CCDC42-203ENST00000581598 CHST1O43916 411 aa16.91■□□□□ 0.3
CCDC42-203ENST00000581598 ARG1P05089 322 aa16.91■□□□□ 0.3
CCDC42-203ENST00000581598 FSTP19883 344 aa16.91■□□□□ 0.3
CCDC42-203ENST00000581598 AZGP1P25311 298 aaKnown RBP16.91■□□□□ 0.3
CCDC42-203ENST00000581598 SPIN3Q5JUX0 258 aa16.91■□□□□ 0.3
CCDC42-203ENST00000581598 FAM27D1Q5T7N8 215 aa16.91■□□□□ 0.3
CCDC42-203ENST00000581598 FAM58AQ8N1B3 248 aa16.91■□□□□ 0.3
CCDC42-203ENST00000581598 DYNAPQ8N1N2 210 aa16.91■□□□□ 0.3
CCDC42-203ENST00000581598 RAB2BQ8WUD1 216 aa16.91■□□□□ 0.3
CCDC42-203ENST00000581598 CFHR4Q92496 578 aa16.91■□□□□ 0.3
CCDC42-203ENST00000581598 FGGYQ96C11 551 aa16.91■□□□□ 0.3
CCDC42-203ENST00000581598 CENPOQ9BU64 300 aa16.91■□□□□ 0.3
CCDC42-203ENST00000581598 EXOSC4Q9NPD3 245 aaKnown RBP16.91■□□□□ 0.3
CCDC42-203ENST00000581598 TCF19Q9Y242 345 aa16.91■□□□□ 0.3
CCDC42-203ENST00000581598 LOC100506127A0A0U1RQW1 187 aa16.9■□□□□ 0.3
CCDC42-203ENST00000581598 MGST3O14880 152 aa16.9■□□□□ 0.3
CCDC42-203ENST00000581598 ARL6IP5O75915 188 aa16.9■□□□□ 0.3
CCDC42-203ENST00000581598 ZNF20P17024 532 aa16.9■□□□□ 0.3
CCDC42-203ENST00000581598 IGFBP3P17936 291 aaPredicted RBP16.9■□□□□ 0.3
CCDC42-203ENST00000581598 BCL3P20749 454 aa16.9■□□□□ 0.3
CCDC42-203ENST00000581598 ERP29P30040 261 aaKnown RBP16.9■□□□□ 0.3
CCDC42-203ENST00000581598 NPBWR2P48146 333 aa16.9■□□□□ 0.3
CCDC42-203ENST00000581598 DYNLT3P51808 116 aa16.9■□□□□ 0.3
CCDC42-203ENST00000581598 MTCP1P56278 107 aa16.9■□□□□ 0.3
CCDC42-203ENST00000581598 C22orf42Q6IC83 251 aa16.9■□□□□ 0.3
CCDC42-203ENST00000581598 ZNF529Q6P280 563 aa16.9■□□□□ 0.3
CCDC42-203ENST00000581598 OR52N4Q8NGI2 321 aa16.9■□□□□ 0.3
CCDC42-203ENST00000581598 ISOC1Q96CN7 298 aa16.9■□□□□ 0.3
CCDC42-203ENST00000581598 RBFOX1Q9NWB1 397 aaKnown RBP16.9■□□□□ 0.3
CCDC42-203ENST00000581598 GSTK1Q9Y2Q3 226 aa16.9■□□□□ 0.3
CCDC42-203ENST00000581598 SIGLEC9Q9Y336 463 aa16.9■□□□□ 0.3
CCDC42-203ENST00000581598 ZNF701M0R085 212 aaPredicted RBP16.89■□□□□ 0.29
CCDC42-203ENST00000581598 PSPNO60542 156 aa16.89■□□□□ 0.29
CCDC42-203ENST00000581598 CSF1P09603 554 aa16.89■□□□□ 0.29
CCDC42-203ENST00000581598 POU3F4P49335 361 aa16.89■□□□□ 0.29
CCDC42-203ENST00000581598 PDZK1IP1Q13113 114 aa16.89■□□□□ 0.29
CCDC42-203ENST00000581598 GRK1Q15835 563 aa16.89■□□□□ 0.29
CCDC42-203ENST00000581598 LDLRAD2Q5SZI1 272 aa16.89■□□□□ 0.29
CCDC42-203ENST00000581598 MINOS1Q5TGZ0 78 aa16.89■□□□□ 0.29
CCDC42-203ENST00000581598 SERPINA12Q8IW75 414 aa16.89■□□□□ 0.29
CCDC42-203ENST00000581598 Q8N2B8 174 aa16.89■□□□□ 0.29
CCDC42-203ENST00000581598 RHOFQ9HBH0 211 aa16.89■□□□□ 0.29
CCDC42-203ENST00000581598 IL36RNQ9UBH0 155 aa16.89■□□□□ 0.29
CCDC42-203ENST00000581598 GLS2Q9UI32 602 aa16.89■□□□□ 0.29
CCDC42-203ENST00000581598 PITPNC1Q9UKF7 332 aa16.89■□□□□ 0.29
CCDC42-203ENST00000581598 FOXJ3Q9UPW0 622 aa16.89■□□□□ 0.29
CCDC42-203ENST00000581598 SESN1Q9Y6P5 492 aa16.89■□□□□ 0.29
CCDC42-203ENST00000581598 MINOS1-NBL1R4GNA1 71 aa16.89■□□□□ 0.29
CCDC42-203ENST00000581598 PRKDCP78527 4128 aaKnown RBP16.89■□□□□ 0.29
CCDC42-203ENST00000581598 TRAV1-2A0A0B4J238 106 aa16.88■□□□□ 0.29
CCDC42-203ENST00000581598 A0A1W2PPK0 400 aa16.88■□□□□ 0.29
CCDC42-203ENST00000581598 A6NDX4 124 aa16.88■□□□□ 0.29
CCDC42-203ENST00000581598 ALX3O95076 343 aa16.88■□□□□ 0.29
CCDC42-203ENST00000581598 PRKACAP17612 351 aa16.88■□□□□ 0.29
CCDC42-203ENST00000581598 GABRR1P24046 479 aa16.88■□□□□ 0.29
CCDC42-203ENST00000581598 EDDM3AQ14507 147 aa16.88■□□□□ 0.29
CCDC42-203ENST00000581598 HSD17B12Q53GQ0 312 aa16.88■□□□□ 0.29
CCDC42-203ENST00000581598 FOXB2Q5VYV0 432 aa16.88■□□□□ 0.29
CCDC42-203ENST00000581598 ORAI1Q96D31 301 aa16.88■□□□□ 0.29
CCDC42-203ENST00000581598 KCTD7Q96MP8 289 aa16.88■□□□□ 0.29
CCDC42-203ENST00000581598 RNF167Q9H6Y7 350 aa16.88■□□□□ 0.29
CCDC42-203ENST00000581598 HMG20AQ9NP66 347 aa16.88■□□□□ 0.29
CCDC42-203ENST00000581598 ABCB10Q9NRK6 738 aa16.88■□□□□ 0.29
CCDC42-203ENST00000581598 TAS2R4Q9NYW5 299 aa16.88■□□□□ 0.29
CCDC42-203ENST00000581598 UBE2J1Q9Y385 318 aaPredicted RBP16.88■□□□□ 0.29
CCDC42-203ENST00000581598 TRAV8-7A0A075B6U6 113 aa16.87■□□□□ 0.29
CCDC42-203ENST00000581598 SHISA3A0PJX4 238 aa16.87■□□□□ 0.29
CCDC42-203ENST00000581598 KDM4BO94953 1096 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms