RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 FOXA1P55317 472 aa2.23□□□□□ -2.05
SMCHD1-205ENST00000581383 BAXQ07812 192 aa2.23□□□□□ -2.05
SMCHD1-205ENST00000581383 CEACAM21Q3KPI0 293 aa2.23□□□□□ -2.05
SMCHD1-205ENST00000581383 KRTAP25-1Q3LHN0 102 aa2.23□□□□□ -2.05
SMCHD1-205ENST00000581383 LGALSLQ3ZCW2 172 aaPredicted RBP2.23□□□□□ -2.05
SMCHD1-205ENST00000581383 AHSA2Q719I0 299 aa2.23□□□□□ -2.05
SMCHD1-205ENST00000581383 CPNE9Q8IYJ1 553 aa2.23□□□□□ -2.05
SMCHD1-205ENST00000581383 EIF4E3Q8N5X7 224 aaKnown RBP2.23□□□□□ -2.05
SMCHD1-205ENST00000581383 OR2Y1Q8NGV0 311 aa2.23□□□□□ -2.05
SMCHD1-205ENST00000581383 CCDC124Q96CT7 223 aaKnown RBP2.23□□□□□ -2.05
SMCHD1-205ENST00000581383 SUCNR1Q9BXA5 334 aa2.23□□□□□ -2.05
SMCHD1-205ENST00000581383 MAT2BQ9NZL9 334 aa2.23□□□□□ -2.05
SMCHD1-205ENST00000581383 POFUT2Q9Y2G5 429 aa2.23□□□□□ -2.05
SMCHD1-205ENST00000581383 CARHSP1Q9Y2V2 147 aaKnown RBP2.23□□□□□ -2.05
SMCHD1-205ENST00000581383 USH1CQ9Y6N9 552 aa2.23□□□□□ -2.05
SMCHD1-205ENST00000581383 TARBP1Q13395 1621 aaKnown RBP2.23□□□□□ -2.05
SMCHD1-205ENST00000581383 LTBP4Q8N2S1 1624 aa2.23□□□□□ -2.05
SMCHD1-205ENST00000581383 CLASP1Q7Z460 1538 aa2.22□□□□□ -2.05
SMCHD1-205ENST00000581383 PLPP3O14495 311 aa2.22□□□□□ -2.05
SMCHD1-205ENST00000581383 CDIPTO14735 213 aa2.22□□□□□ -2.05
SMCHD1-205ENST00000581383 LDOC1O95751 146 aaPredicted RBP2.22□□□□□ -2.05
SMCHD1-205ENST00000581383 IGHV3-53P01767 116 aa2.22□□□□□ -2.05
SMCHD1-205ENST00000581383 CGB3P0DN86 165 aa2.22□□□□□ -2.05
SMCHD1-205ENST00000581383 CGB7P0DN87 165 aa2.22□□□□□ -2.05
SMCHD1-205ENST00000581383 RPA3P35244 121 aaPredicted RBP2.22□□□□□ -2.05
SMCHD1-205ENST00000581383 PLTPP55058 493 aa2.22□□□□□ -2.05
SMCHD1-205ENST00000581383 HADHBP55084 474 aaKnown RBP2.22□□□□□ -2.05
SMCHD1-205ENST00000581383 HBG1P69891 147 aa2.22□□□□□ -2.05
SMCHD1-205ENST00000581383 HBG2P69892 147 aa2.22□□□□□ -2.05
SMCHD1-205ENST00000581383 MEF2BQ02080 365 aaPredicted RBP2.22□□□□□ -2.05
SMCHD1-205ENST00000581383 PSG3Q16557 428 aa2.22□□□□□ -2.05
SMCHD1-205ENST00000581383 GOLGA7BQ2TAP0 167 aa2.22□□□□□ -2.05
SMCHD1-205ENST00000581383 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
SMCHD1-205ENST00000581383 Q6ZQT7 251 aa2.22□□□□□ -2.05
SMCHD1-205ENST00000581383 COMTD1Q86VU5 262 aa2.22□□□□□ -2.05
SMCHD1-205ENST00000581383 RPRMLQ8N4K4 120 aa2.22□□□□□ -2.05
SMCHD1-205ENST00000581383 CMTM2Q8TAZ6 248 aa2.22□□□□□ -2.05
SMCHD1-205ENST00000581383 CASTOR1Q8WTX7 329 aa2.22□□□□□ -2.05
SMCHD1-205ENST00000581383 MAL2Q969L2 176 aa2.22□□□□□ -2.05
SMCHD1-205ENST00000581383 MFSD1Q9H3U5 465 aa2.22□□□□□ -2.05
SMCHD1-205ENST00000581383 SOGA1O94964 1423 aa2.22□□□□□ -2.05
SMCHD1-205ENST00000581383 ADAMTS12P58397 1594 aa2.22□□□□□ -2.05
SMCHD1-205ENST00000581383 ABCC8Q09428 1581 aa2.22□□□□□ -2.05
SMCHD1-205ENST00000581383 GOLGA8IPA6NC78 632 aa2.21□□□□□ -2.06
SMCHD1-205ENST00000581383 GGTLC3B5MD39 225 aa2.21□□□□□ -2.06
SMCHD1-205ENST00000581383 D6RAR5 112 aa2.21□□□□□ -2.06
SMCHD1-205ENST00000581383 F8VP50 259 aa2.21□□□□□ -2.06
SMCHD1-205ENST00000581383 UBDO15205 165 aa2.21□□□□□ -2.06
SMCHD1-205ENST00000581383 SYNJ1O43426 1573 aa2.21□□□□□ -2.06
SMCHD1-205ENST00000581383 SYNGR2O43760 224 aa2.21□□□□□ -2.06
SMCHD1-205ENST00000581383 PDCD6O75340 191 aa2.21□□□□□ -2.06
SMCHD1-205ENST00000581383 HLA-AP01891 365 aaKnown RBP2.21□□□□□ -2.06
SMCHD1-205ENST00000581383 ZNF708P17019 499 aa2.21□□□□□ -2.06
SMCHD1-205ENST00000581383 CNTFRP26992 372 aa2.21□□□□□ -2.06
SMCHD1-205ENST00000581383 ELK4P28324 431 aa2.21□□□□□ -2.06
SMCHD1-205ENST00000581383 CRABP2P29373 138 aa2.21□□□□□ -2.06
SMCHD1-205ENST00000581383 TSPOP30536 169 aa2.21□□□□□ -2.06
SMCHD1-205ENST00000581383 AQP5P55064 265 aa2.21□□□□□ -2.06
SMCHD1-205ENST00000581383 CD164Q04900 197 aa2.21□□□□□ -2.06
SMCHD1-205ENST00000581383 PRDX1Q06830 199 aaKnown RBP2.21□□□□□ -2.06
SMCHD1-205ENST00000581383 ELP2Q6IA86 826 aa2.21□□□□□ -2.06
SMCHD1-205ENST00000581383 CYHR1Q6ZMK1 362 aa2.21□□□□□ -2.06
SMCHD1-205ENST00000581383 SPATA31E1Q6ZUB1 1445 aa2.21□□□□□ -2.06
SMCHD1-205ENST00000581383 SPERTQ8NA61 448 aa2.21□□□□□ -2.06
SMCHD1-205ENST00000581383 GATD1Q8NB37 220 aa2.21□□□□□ -2.06
SMCHD1-205ENST00000581383 MUC7Q8TAX7 377 aa2.21□□□□□ -2.06
SMCHD1-205ENST00000581383 PGLYRP3Q96LB9 341 aa2.21□□□□□ -2.06
SMCHD1-205ENST00000581383 PKMYT1Q99640 499 aa2.21□□□□□ -2.06
SMCHD1-205ENST00000581383 TAPBPLQ9BX59 468 aa2.21□□□□□ -2.06
SMCHD1-205ENST00000581383 TSSK6Q9BXA6 273 aa2.21□□□□□ -2.06
SMCHD1-205ENST00000581383 TAS2R13Q9NYV9 303 aa2.21□□□□□ -2.06
SMCHD1-205ENST00000581383 ENPP5Q9UJA9 477 aa2.21□□□□□ -2.06
SMCHD1-205ENST00000581383 MCTS1Q9ULC4 181 aaKnown RBP2.21□□□□□ -2.06
SMCHD1-205ENST00000581383 BTRCQ9Y297 605 aa2.21□□□□□ -2.06
SMCHD1-205ENST00000581383 PLXNB1O43157 2135 aa2.21□□□□□ -2.06
SMCHD1-205ENST00000581383 GRIN2BQ13224 1484 aa2.2□□□□□ -2.06
SMCHD1-205ENST00000581383 GAPVD1Q14C86 1478 aa2.2□□□□□ -2.06
SMCHD1-205ENST00000581383 CEP170Q5SW79 1584 aa2.2□□□□□ -2.06
SMCHD1-205ENST00000581383 IGHV2-26A0A0B4J1V2 119 aa2.2□□□□□ -2.06
SMCHD1-205ENST00000581383 GOLGA8QA0A0J9YX86 632 aa2.2□□□□□ -2.06
SMCHD1-205ENST00000581383 A0A1W2PRG6 482 aa2.2□□□□□ -2.06
SMCHD1-205ENST00000581383 A6NED7 52 aa2.2□□□□□ -2.06
SMCHD1-205ENST00000581383 H3BMM0 161 aa2.2□□□□□ -2.06
SMCHD1-205ENST00000581383 I3L4J1 428 aa2.2□□□□□ -2.06
SMCHD1-205ENST00000581383 AQP9O43315 295 aa2.2□□□□□ -2.06
SMCHD1-205ENST00000581383 CA2P00918 260 aa2.2□□□□□ -2.06
SMCHD1-205ENST00000581383 GABRA1P14867 456 aa2.2□□□□□ -2.06
SMCHD1-205ENST00000581383 BSXQ3C1V8 233 aa2.2□□□□□ -2.06
SMCHD1-205ENST00000581383 LAMTOR1Q6IAA8 161 aa2.2□□□□□ -2.06
SMCHD1-205ENST00000581383 LRRC6Q86X45 466 aa2.2□□□□□ -2.06
SMCHD1-205ENST00000581383 TCAIMQ8N3R3 496 aa2.2□□□□□ -2.06
SMCHD1-205ENST00000581383 UBE2WQ96B02 151 aa2.2□□□□□ -2.06
SMCHD1-205ENST00000581383 SLC25A44Q96H78 314 aaPredicted RBP2.2□□□□□ -2.06
SMCHD1-205ENST00000581383 FBXL15Q9H469 300 aa2.2□□□□□ -2.06
SMCHD1-205ENST00000581383 POMPQ9Y244 141 aa2.2□□□□□ -2.06
SMCHD1-205ENST00000581383 ZNF443Q9Y2A4 671 aaPredicted RBP2.2□□□□□ -2.06
SMCHD1-205ENST00000581383 SNX24Q9Y343 169 aa2.2□□□□□ -2.06
SMCHD1-205ENST00000581383 WDR97A6NE52 1622 aa2.2□□□□□ -2.06
SMCHD1-205ENST00000581383 ABCA5Q8WWZ7 1642 aa2.2□□□□□ -2.06
SMCHD1-205ENST00000581383 GRIN2AQ12879 1464 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms