RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 A0A1W2PPE3 182 aa12.59□□□□□ -0.39
CTDNEP1-211ENST00000575783 HSD17B6O14756 317 aa12.59□□□□□ -0.39
CTDNEP1-211ENST00000575783 SYT7O43581 403 aa12.59□□□□□ -0.39
CTDNEP1-211ENST00000575783 SERPINA3P01011 423 aa12.59□□□□□ -0.39
CTDNEP1-211ENST00000575783 HMGN1P05114 100 aa12.59□□□□□ -0.39
CTDNEP1-211ENST00000575783 GLP1RP43220 463 aa12.59□□□□□ -0.39
CTDNEP1-211ENST00000575783 RBP2P50120 134 aa12.59□□□□□ -0.39
CTDNEP1-211ENST00000575783 ATP1B3P54709 279 aa12.59□□□□□ -0.39
CTDNEP1-211ENST00000575783 SLURP1P55000 103 aa12.59□□□□□ -0.39
CTDNEP1-211ENST00000575783 MTCP1P56278 107 aa12.59□□□□□ -0.39
CTDNEP1-211ENST00000575783 ISL1P61371 349 aa12.59□□□□□ -0.39
CTDNEP1-211ENST00000575783 RUNX1Q01196 453 aa12.59□□□□□ -0.39
CTDNEP1-211ENST00000575783 KIAA0141Q14154 515 aaPredicted RBP12.59□□□□□ -0.39
CTDNEP1-211ENST00000575783 ZNF322Q6U7Q0 402 aaPredicted RBP12.59□□□□□ -0.39
CTDNEP1-211ENST00000575783 CYP2R1Q6VVX0 501 aa12.59□□□□□ -0.39
CTDNEP1-211ENST00000575783 Q6ZSR3 168 aa12.59□□□□□ -0.39
CTDNEP1-211ENST00000575783 SGPP2Q8IWX5 399 aa12.59□□□□□ -0.39
CTDNEP1-211ENST00000575783 Q8N1Y9 231 aa12.59□□□□□ -0.39
CTDNEP1-211ENST00000575783 ZNF565Q8N9K5 539 aa12.59□□□□□ -0.39
CTDNEP1-211ENST00000575783 RFESDQ8TAC1 157 aa12.59□□□□□ -0.39
CTDNEP1-211ENST00000575783 S1PR3Q99500 378 aa12.59□□□□□ -0.39
CTDNEP1-211ENST00000575783 PLSCR3Q9NRY6 295 aa12.59□□□□□ -0.39
CTDNEP1-211ENST00000575783 IDI2-AS1Q9NZ38 188 aa12.59□□□□□ -0.39
CTDNEP1-211ENST00000575783 KIAA2026Q5HYC2 2103 aa12.58□□□□□ -0.4
CTDNEP1-211ENST00000575783 MAGEA13PA6NCF6 341 aa12.58□□□□□ -0.4
CTDNEP1-211ENST00000575783 SLC25A17O43808 307 aa12.58□□□□□ -0.4
CTDNEP1-211ENST00000575783 RPP14O95059 124 aaKnown RBP12.58□□□□□ -0.4
CTDNEP1-211ENST00000575783 GAPDHP04406 335 aaKnown RBP12.58□□□□□ -0.4
CTDNEP1-211ENST00000575783 SOX6P35712 828 aa12.58□□□□□ -0.4
CTDNEP1-211ENST00000575783 MAGEA2P43356 314 aa12.58□□□□□ -0.4
CTDNEP1-211ENST00000575783 ZP1P60852 638 aa12.58□□□□□ -0.4
CTDNEP1-211ENST00000575783 CXCR4P61073 352 aa12.58□□□□□ -0.4
CTDNEP1-211ENST00000575783 ACTR3P61158 418 aa12.58□□□□□ -0.4
CTDNEP1-211ENST00000575783 HAGHQ16775 308 aa12.58□□□□□ -0.4
CTDNEP1-211ENST00000575783 FAM71E2Q8N5Q1 922 aa12.58□□□□□ -0.4
CTDNEP1-211ENST00000575783 Q8N6K4 173 aa12.58□□□□□ -0.4
CTDNEP1-211ENST00000575783 MYOZ3Q8TDC0 251 aa12.58□□□□□ -0.4
CTDNEP1-211ENST00000575783 ARPC1AQ92747 370 aa12.58□□□□□ -0.4
CTDNEP1-211ENST00000575783 CHST5Q9GZS9 411 aa12.58□□□□□ -0.4
CTDNEP1-211ENST00000575783 ALX4Q9H161 411 aaPredicted RBP12.58□□□□□ -0.4
CTDNEP1-211ENST00000575783 KRT84Q9NSB2 600 aa12.58□□□□□ -0.4
CTDNEP1-211ENST00000575783 CALYQ9NYX4 217 aa12.58□□□□□ -0.4
CTDNEP1-211ENST00000575783 WSB1Q9Y6I7 421 aa12.58□□□□□ -0.4
CTDNEP1-211ENST00000575783 OR5H8P0DN80 308 aa12.57□□□□□ -0.4
CTDNEP1-211ENST00000575783 CGB3P0DN86 165 aa12.57□□□□□ -0.4
CTDNEP1-211ENST00000575783 CGB7P0DN87 165 aa12.57□□□□□ -0.4
CTDNEP1-211ENST00000575783 CCL1P22362 96 aa12.57□□□□□ -0.4
CTDNEP1-211ENST00000575783 OR2T5Q6IEZ7 315 aa12.57□□□□□ -0.4
CTDNEP1-211ENST00000575783 ACSM6Q6P461 480 aa12.57□□□□□ -0.4
CTDNEP1-211ENST00000575783 HAPLN4Q86UW8 402 aa12.57□□□□□ -0.4
CTDNEP1-211ENST00000575783 OR2T29Q8NH02 315 aa12.57□□□□□ -0.4
CTDNEP1-211ENST00000575783 EME1Q96AY2 570 aa12.57□□□□□ -0.4
CTDNEP1-211ENST00000575783 OR4C12Q96R67 309 aa12.57□□□□□ -0.4
CTDNEP1-211ENST00000575783 ADI1Q9BV57 179 aa12.57□□□□□ -0.4
CTDNEP1-211ENST00000575783 OSBPL10Q9BXB5 764 aa12.57□□□□□ -0.4
CTDNEP1-211ENST00000575783 MEIKINA0A087WXM9 373 aa12.56□□□□□ -0.4
CTDNEP1-211ENST00000575783 CCDC182A6NF36 153 aa12.56□□□□□ -0.4
CTDNEP1-211ENST00000575783 A8MZ25 164 aa12.56□□□□□ -0.4
CTDNEP1-211ENST00000575783 SLC33A1O00400 549 aaPredicted RBP12.56□□□□□ -0.4
CTDNEP1-211ENST00000575783 HSPB6O14558 160 aa12.56□□□□□ -0.4
CTDNEP1-211ENST00000575783 DEGS1O15121 323 aa12.56□□□□□ -0.4
CTDNEP1-211ENST00000575783 IGF1P05019 195 aa12.56□□□□□ -0.4
CTDNEP1-211ENST00000575783 CSN2P05814 226 aa12.56□□□□□ -0.4
CTDNEP1-211ENST00000575783 ARSBP15848 533 aa12.56□□□□□ -0.4
CTDNEP1-211ENST00000575783 C21orf33P30042 268 aaPredicted RBP12.56□□□□□ -0.4
CTDNEP1-211ENST00000575783 ZNF816Q0VGE8 651 aaPredicted RBP12.56□□□□□ -0.4
CTDNEP1-211ENST00000575783 PDZK1IP1Q13113 114 aa12.56□□□□□ -0.4
CTDNEP1-211ENST00000575783 TMEM236Q5W0B7 351 aa12.56□□□□□ -0.4
CTDNEP1-211ENST00000575783 LYPD6Q86Y78 171 aa12.56□□□□□ -0.4
CTDNEP1-211ENST00000575783 IZUMO1Q8IYV9 350 aa12.56□□□□□ -0.4
CTDNEP1-211ENST00000575783 OR13A1Q8NGR1 328 aa12.56□□□□□ -0.4
CTDNEP1-211ENST00000575783 GIPC3Q8TF64 312 aa12.56□□□□□ -0.4
CTDNEP1-211ENST00000575783 DDB2Q92466 427 aa12.56□□□□□ -0.4
CTDNEP1-211ENST00000575783 RFT1Q96AA3 541 aa12.56□□□□□ -0.4
CTDNEP1-211ENST00000575783 OR51J1Q9H342 316 aa12.56□□□□□ -0.4
CTDNEP1-211ENST00000575783 CHCHD3Q9NX63 227 aaKnown RBP12.56□□□□□ -0.4
CTDNEP1-211ENST00000575783 MRM2Q9UI43 246 aaKnown RBP12.56□□□□□ -0.4
CTDNEP1-211ENST00000575783 IGKV1-12A0A0C4DH73 117 aa12.55□□□□□ -0.4
CTDNEP1-211ENST00000575783 ZNF736B4DX44 427 aaPredicted RBP12.55□□□□□ -0.4
CTDNEP1-211ENST00000575783 LINC01619G3V211 115 aa12.55□□□□□ -0.4
CTDNEP1-211ENST00000575783 G3V318 75 aa12.55□□□□□ -0.4
CTDNEP1-211ENST00000575783 MOSP00540 346 aa12.55□□□□□ -0.4
CTDNEP1-211ENST00000575783 IL1AP01583 271 aa12.55□□□□□ -0.4
CTDNEP1-211ENST00000575783 IGKV1D-12P01611 117 aa12.55□□□□□ -0.4
CTDNEP1-211ENST00000575783 OR8U9P0C7N5 309 aa12.55□□□□□ -0.4
CTDNEP1-211ENST00000575783 HTR1FP30939 366 aa12.55□□□□□ -0.4
CTDNEP1-211ENST00000575783 F2RL1P55085 397 aa12.55□□□□□ -0.4
CTDNEP1-211ENST00000575783 CDK5Q00535 292 aa12.55□□□□□ -0.4
CTDNEP1-211ENST00000575783 Q6P435 159 aa12.55□□□□□ -0.4
CTDNEP1-211ENST00000575783 DNAAF1Q8NEP3 725 aa12.55□□□□□ -0.4
CTDNEP1-211ENST00000575783 CNN2Q99439 309 aaKnown RBP12.55□□□□□ -0.4
CTDNEP1-211ENST00000575783 COMMD4Q9H0A8 199 aa12.55□□□□□ -0.4
CTDNEP1-211ENST00000575783 KIAA1456Q9P272 454 aa12.55□□□□□ -0.4
CTDNEP1-211ENST00000575783 KIF25Q9UIL4 384 aa12.55□□□□□ -0.4
CTDNEP1-211ENST00000575783 LY6G6CO95867 125 aa12.54□□□□□ -0.4
CTDNEP1-211ENST00000575783 PPIFP30405 207 aaKnown RBP12.54□□□□□ -0.4
CTDNEP1-211ENST00000575783 MTNR1BP49286 362 aa12.54□□□□□ -0.4
CTDNEP1-211ENST00000575783 RAB9AP51151 201 aa12.54□□□□□ -0.4
CTDNEP1-211ENST00000575783 HDXQ7Z353 690 aa12.54□□□□□ -0.4
CTDNEP1-211ENST00000575783 SLC35F2Q8IXU6 374 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms