RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 BAP18Q8IXM2 172 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 OR10R2Q8NGX6 335 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 OR8U1Q8NH10 309 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 COQ8AQ8NI60 647 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 MARCH1Q8TCQ1 289 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 CREB3L1Q96BA8 519 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 CERS2Q96G23 380 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 C20orf27Q9GZN8 174 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 OR52A5Q9H2C5 316 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 SLC25A37Q9NYZ2 338 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 OR52A1Q9UKL2 312 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 ECM29Q5VYK3 1845 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 TRPM1Q7Z4N2 1603 aa3.93□□□□□ -1.78
UBR1-208ENST00000569066 TRAV19A0A0A6YYK7 116 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 TRBV9A0A0B4J1U6 114 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 DISC1C4P0D8 188 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 M0R233 179 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 AZIN1O14977 448 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 MRPS12O15235 138 aaKnown RBP3.92□□□□□ -1.78
UBR1-208ENST00000569066 KRTAP1-4P0C5Y4 121 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 ZNF17P17021 662 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 ADCYAP1P18509 176 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 IL12BP29460 328 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 GUK1Q16774 197 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 SMIM21Q3B7S5 101 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 COX15Q7KZN9 410 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 PID1Q7Z2X4 250 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 VTCN1Q7Z7D3 282 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 RBM45Q8IUH3 476 aaKnown RBP3.92□□□□□ -1.78
UBR1-208ENST00000569066 FUNDC1Q8IVP5 155 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 SVBPQ8N300 66 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 OR10D4PQ8NGN7 298 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 OR13D1Q8NGV5 346 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 MITD1Q8WV92 249 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 GEMIN6Q8WXD5 167 aaKnown RBP3.92□□□□□ -1.78
UBR1-208ENST00000569066 TSNAXQ99598 290 aaKnown RBP3.92□□□□□ -1.78
UBR1-208ENST00000569066 UTP23Q9BRU9 249 aaKnown RBP3.92□□□□□ -1.78
UBR1-208ENST00000569066 PDFQ9HBH1 243 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 AGPAT4Q9NRZ5 378 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 ST3GAL6Q9Y274 331 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 SLC17A4Q9Y2C5 497 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 ZFP30Q9Y2G7 519 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 RBM7Q9Y580 266 aaKnown RBP3.92□□□□□ -1.78
UBR1-208ENST00000569066 RFNGQ9Y644 331 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 SPHKAPQ2M3C7 1700 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 MYOM1P52179 1685 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 PREX1Q8TCU6 1659 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 TET2Q6N021 2002 aaPredicted RBP3.92□□□□□ -1.78
UBR1-208ENST00000569066 UNC13BO14795 1591 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 TANC1Q9C0D5 1861 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 C20orf202A1L168 122 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 PLA2G10O15496 165 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 VAPBO95292 243 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 AIFM1O95831 613 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 SLC25A27O95847 323 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 TCRBP04435 133 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 RPN2P04844 631 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 NFYBP25208 207 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 SSR4P51571 173 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 ADARB1P78563 741 aaKnown RBP3.92□□□□□ -1.78
UBR1-208ENST00000569066 EMX1Q04741 257 aaPredicted RBP3.92□□□□□ -1.78
UBR1-208ENST00000569066 SDHAF4Q5VUM1 108 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 DNAJC24Q6P3W2 148 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 UNC93AQ86WB7 457 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 COMMD1Q8N668 190 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 PROKR2Q8NFJ6 384 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 OR2G3Q8NGZ4 309 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 IL22RA2Q969J5 263 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 PRAP1Q96NZ9 151 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 FAAP24Q9BTP7 215 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 RAB1BQ9H0U4 201 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 LYRM4Q9HD34 91 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 HRASLS2Q9NWW9 162 aa3.92□□□□□ -1.78
UBR1-208ENST00000569066 MARCOQ9UEW3 520 aaPredicted RBP3.92□□□□□ -1.78
UBR1-208ENST00000569066 ZNF142P52746 1687 aaPredicted RBP3.92□□□□□ -1.78
UBR1-208ENST00000569066 ADGRL1O94910 1474 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 MROH1Q8NDA8 1641 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 PNMA8CA0A1B0GUJ8 204 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 A0A1B0GV72 72 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 B4GALT5O43286 388 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 SLC19A2O60779 497 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 S100A2P29034 98 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 BRS3P32247 399 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 APLNRP35414 380 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 RAB25P57735 213 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 PEA15Q15121 130 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 RSPO1Q2MKA7 263 aaPredicted RBP3.91□□□□□ -1.78
UBR1-208ENST00000569066 MESTQ5EB52 335 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 ALKAL2Q6UX46 152 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 TMEM156Q8N614 296 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 CLDN22Q8N7P3 220 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 OR4C6Q8NH72 309 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 LYPD6BQ8NI32 183 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 GHSRQ92847 366 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 HIST1H2BAQ96A08 127 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 SMIM12Q96EX1 92 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 OR2M2Q96R28 347 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 CHRNA10Q9GZZ6 450 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 ABCG5Q9H222 651 aa3.91□□□□□ -1.78
UBR1-208ENST00000569066 RGCCQ9H4X1 137 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 208.6 ms