RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 FBXW12Q6X9E4 464 aa8.96□□□□□ -0.98
CDH3-208ENST00000569036 SYS1Q8N2H4 156 aa8.96□□□□□ -0.98
CDH3-208ENST00000569036 OR8D4Q8NGM9 314 aa8.96□□□□□ -0.98
CDH3-208ENST00000569036 OR6T1Q8NGN1 323 aa8.96□□□□□ -0.98
CDH3-208ENST00000569036 SCARB1Q8WTV0 552 aa8.96□□□□□ -0.98
CDH3-208ENST00000569036 GIMAP1Q8WWP7 306 aa8.96□□□□□ -0.98
CDH3-208ENST00000569036 RBP7Q96R05 134 aa8.96□□□□□ -0.98
CDH3-208ENST00000569036 TM2D3Q9BRN9 247 aa8.96□□□□□ -0.98
CDH3-208ENST00000569036 ALG8Q9BVK2 526 aa8.96□□□□□ -0.98
CDH3-208ENST00000569036 METTL8Q9H825 291 aaKnown RBP8.96□□□□□ -0.98
CDH3-208ENST00000569036 ZNF256Q9Y2P7 627 aaPredicted RBP8.96□□□□□ -0.98
CDH3-208ENST00000569036 MFSD2BA6NFX1 497 aa8.95□□□□□ -0.98
CDH3-208ENST00000569036 IQCF6A8MYZ5 107 aa8.95□□□□□ -0.98
CDH3-208ENST00000569036 GABARAPH6UMI1 98 aa8.95□□□□□ -0.98
CDH3-208ENST00000569036 M0R3H8 397 aa8.95□□□□□ -0.98
CDH3-208ENST00000569036 ZNF593O00488 134 aaPredicted RBP8.95□□□□□ -0.98
CDH3-208ENST00000569036 SSNA1O43805 119 aa8.95□□□□□ -0.98
CDH3-208ENST00000569036 TSC22D2O75157 780 aa8.95□□□□□ -0.98
CDH3-208ENST00000569036 MT-ATP6P00846 226 aa8.95□□□□□ -0.98
CDH3-208ENST00000569036 EIF4EP06730 217 aaKnown RBP8.95□□□□□ -0.98
CDH3-208ENST00000569036 RAB13P51153 203 aa8.95□□□□□ -0.98
CDH3-208ENST00000569036 FMODQ06828 376 aa8.95□□□□□ -0.98
CDH3-208ENST00000569036 ULK3Q6PHR2 472 aa8.95□□□□□ -0.98
CDH3-208ENST00000569036 LYPD4Q6UWN0 246 aa8.95□□□□□ -0.98
CDH3-208ENST00000569036 COLCA1Q6ZS62 124 aa8.95□□□□□ -0.98
CDH3-208ENST00000569036 RANBP3LQ86VV4 465 aaPredicted RBP8.95□□□□□ -0.98
CDH3-208ENST00000569036 LNX2Q8N448 690 aa8.95□□□□□ -0.98
CDH3-208ENST00000569036 OR10Z1Q8NGY1 313 aa8.95□□□□□ -0.98
CDH3-208ENST00000569036 THRSPQ92748 146 aa8.95□□□□□ -0.98
CDH3-208ENST00000569036 P2RX4Q99571 388 aa8.95□□□□□ -0.98
CDH3-208ENST00000569036 C20orf85Q9H1P6 137 aa8.95□□□□□ -0.98
CDH3-208ENST00000569036 TMEM100Q9NV29 134 aa8.95□□□□□ -0.98
CDH3-208ENST00000569036 RDH8Q9NYR8 311 aa8.95□□□□□ -0.98
CDH3-208ENST00000569036 IGHV3OR15-7A0A075B7D8 119 aa8.94□□□□□ -0.98
CDH3-208ENST00000569036 DAPL1A0PJW8 107 aa8.94□□□□□ -0.98
CDH3-208ENST00000569036 SHISA3A0PJX4 238 aa8.94□□□□□ -0.98
CDH3-208ENST00000569036 M0R1W7 72 aa8.94□□□□□ -0.98
CDH3-208ENST00000569036 TOR1AO14656 332 aa8.94□□□□□ -0.98
CDH3-208ENST00000569036 SLC25A17O43808 307 aa8.94□□□□□ -0.98
CDH3-208ENST00000569036 OR2A4O95047 310 aa8.94□□□□□ -0.98
CDH3-208ENST00000569036 COX5BP10606 129 aa8.94□□□□□ -0.98
CDH3-208ENST00000569036 FAUP35544 74 aaKnown RBP8.94□□□□□ -0.98
CDH3-208ENST00000569036 MYCNOSP40205 109 aa8.94□□□□□ -0.98
CDH3-208ENST00000569036 CAV3P56539 151 aa8.94□□□□□ -0.98
CDH3-208ENST00000569036 PCBD1P61457 104 aa8.94□□□□□ -0.98
CDH3-208ENST00000569036 CTAG1AP78358 180 aa8.94□□□□□ -0.98
CDH3-208ENST00000569036 SSBP1Q04837 148 aaKnown RBP8.94□□□□□ -0.98
CDH3-208ENST00000569036 OPCMLQ14982 345 aa8.94□□□□□ -0.98
CDH3-208ENST00000569036 DMKNQ6E0U4 476 aaPredicted RBP8.94□□□□□ -0.98
CDH3-208ENST00000569036 C8orf86Q6ZUL3 223 aa8.94□□□□□ -0.98
CDH3-208ENST00000569036 UTS2BQ765I0 119 aa8.94□□□□□ -0.98
CDH3-208ENST00000569036 BCDIN3DQ7Z5W3 292 aaKnown RBP8.94□□□□□ -0.98
CDH3-208ENST00000569036 LHFPL3Q86UP9 236 aa8.94□□□□□ -0.98
CDH3-208ENST00000569036 RBM45Q8IUH3 476 aaKnown RBP8.94□□□□□ -0.98
CDH3-208ENST00000569036 TIGD4Q8IY51 512 aa8.94□□□□□ -0.98
CDH3-208ENST00000569036 STPG2Q8N412 459 aa8.94□□□□□ -0.98
CDH3-208ENST00000569036 FAM216BQ8N7L0 139 aa8.94□□□□□ -0.98
CDH3-208ENST00000569036 OR2T35Q8NGX2 323 aa8.94□□□□□ -0.98
CDH3-208ENST00000569036 OR4Q3Q8NH05 313 aa8.94□□□□□ -0.98
CDH3-208ENST00000569036 SGTBQ96EQ0 304 aa8.94□□□□□ -0.98
CDH3-208ENST00000569036 LYZL4Q96KX0 146 aa8.94□□□□□ -0.98
CDH3-208ENST00000569036 OR2A7Q96R45 310 aa8.94□□□□□ -0.98
CDH3-208ENST00000569036 DPCDQ9BVM2 203 aaPredicted RBP8.94□□□□□ -0.98
CDH3-208ENST00000569036 EGLN3Q9H6Z9 239 aa8.94□□□□□ -0.98
CDH3-208ENST00000569036 CMC2Q9NRP2 79 aa8.94□□□□□ -0.98
CDH3-208ENST00000569036 SDHAF2Q9NX18 166 aa8.94□□□□□ -0.98
CDH3-208ENST00000569036 ETV7Q9Y603 341 aa8.94□□□□□ -0.98
CDH3-208ENST00000569036 SMLR1H3BR10 107 aa8.93□□□□□ -0.98
CDH3-208ENST00000569036 L7N2F9 121 aa8.93□□□□□ -0.98
CDH3-208ENST00000569036 OGG1O15527 345 aa8.93□□□□□ -0.98
CDH3-208ENST00000569036 DOK2O60496 412 aa8.93□□□□□ -0.98
CDH3-208ENST00000569036 CREBL2O60519 120 aaPredicted RBP8.93□□□□□ -0.98
CDH3-208ENST00000569036 MPC2O95563 127 aa8.93□□□□□ -0.98
CDH3-208ENST00000569036 LY86O95711 162 aa8.93□□□□□ -0.98
CDH3-208ENST00000569036 IFNGP01579 166 aa8.93□□□□□ -0.98
CDH3-208ENST00000569036 FGF2P09038 288 aa8.93□□□□□ -0.98
CDH3-208ENST00000569036 UCHL1P09936 223 aa8.93□□□□□ -0.98
CDH3-208ENST00000569036 ACSM4P0C7M7 580 aa8.93□□□□□ -0.98
CDH3-208ENST00000569036 CALCBP10092 127 aa8.93□□□□□ -0.98
CDH3-208ENST00000569036 RAB3AP20336 220 aa8.93□□□□□ -0.98
CDH3-208ENST00000569036 RGS8P57771 180 aaPredicted RBP8.93□□□□□ -0.98
CDH3-208ENST00000569036 GMFBP60983 142 aa8.93□□□□□ -0.98
CDH3-208ENST00000569036 TSPAN5P62079 268 aa8.93□□□□□ -0.98
CDH3-208ENST00000569036 S100A12P80511 92 aa8.93□□□□□ -0.98
CDH3-208ENST00000569036 FLI1Q01543 452 aaPredicted RBP8.93□□□□□ -0.98
CDH3-208ENST00000569036 ENDOGQ14249 297 aaKnown RBP8.93□□□□□ -0.98
CDH3-208ENST00000569036 C9orf66Q5T8R8 295 aa8.93□□□□□ -0.98
CDH3-208ENST00000569036 TEX36Q5VZQ5 186 aa8.93□□□□□ -0.98
CDH3-208ENST00000569036 GLDNQ6ZMI3 551 aaPredicted RBP8.93□□□□□ -0.98
CDH3-208ENST00000569036 C18orf65Q6ZTR6 163 aa8.93□□□□□ -0.98
CDH3-208ENST00000569036 DYNAPQ8N1N2 210 aa8.93□□□□□ -0.98
CDH3-208ENST00000569036 FTMTQ8N4E7 242 aa8.93□□□□□ -0.98
CDH3-208ENST00000569036 OR11H4Q8NGC9 324 aa8.93□□□□□ -0.98
CDH3-208ENST00000569036 OR52H1Q8NGJ2 320 aa8.93□□□□□ -0.98
CDH3-208ENST00000569036 ASB10Q8WXI3 467 aa8.93□□□□□ -0.98
CDH3-208ENST00000569036 H1FXQ92522 213 aaKnown RBP8.93□□□□□ -0.98
CDH3-208ENST00000569036 ORAI1Q96D31 301 aa8.93□□□□□ -0.98
CDH3-208ENST00000569036 ABHD1Q96SE0 405 aa8.93□□□□□ -0.98
CDH3-208ENST00000569036 CCL13Q99616 98 aa8.93□□□□□ -0.98
CDH3-208ENST00000569036 KRTAP4-5Q9BYR2 181 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms