RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 RAB2BQ8WUD1 216 aa7.73□□□□□ -1.17
CAPN3-216ENST00000567071 CAPSLQ8WWF8 208 aa7.73□□□□□ -1.17
CAPN3-216ENST00000567071 TMEM106AQ96A25 262 aa7.73□□□□□ -1.17
CAPN3-216ENST00000567071 FGGYQ96C11 551 aa7.73□□□□□ -1.17
CAPN3-216ENST00000567071 ADAT3Q96EY9 351 aaPredicted RBP7.73□□□□□ -1.17
CAPN3-216ENST00000567071 RGCCQ9H4X1 137 aa7.73□□□□□ -1.17
CAPN3-216ENST00000567071 BATF3Q9NR55 127 aa7.73□□□□□ -1.17
CAPN3-216ENST00000567071 RSL24D1Q9UHA3 163 aaKnown RBP7.73□□□□□ -1.17
CAPN3-216ENST00000567071 PIGLQ9Y2B2 252 aa7.73□□□□□ -1.17
CAPN3-216ENST00000567071 NOP16Q9Y3C1 178 aaKnown RBP7.73□□□□□ -1.17
CAPN3-216ENST00000567071 TRBV5-7A0A0A0MS05 114 aa7.72□□□□□ -1.17
CAPN3-216ENST00000567071 A6NDX4 124 aa7.72□□□□□ -1.17
CAPN3-216ENST00000567071 GGT3PA6NGU5 568 aa7.72□□□□□ -1.17
CAPN3-216ENST00000567071 VGLL3A8MV65 326 aa7.72□□□□□ -1.17
CAPN3-216ENST00000567071 SEC14L6B5MCN3 397 aa7.72□□□□□ -1.17
CAPN3-216ENST00000567071 J3QW42 95 aa7.72□□□□□ -1.17
CAPN3-216ENST00000567071 SC5DO75845 299 aa7.72□□□□□ -1.17
CAPN3-216ENST00000567071 GATBO75879 557 aaKnown RBP7.72□□□□□ -1.17
CAPN3-216ENST00000567071 CD2P06729 351 aa7.72□□□□□ -1.17
CAPN3-216ENST00000567071 CFL1P23528 166 aaKnown RBP7.72□□□□□ -1.17
CAPN3-216ENST00000567071 MYL9P24844 172 aa7.72□□□□□ -1.17
CAPN3-216ENST00000567071 PAX6P26367 422 aa7.72□□□□□ -1.17
CAPN3-216ENST00000567071 MAPK3P27361 379 aaPredicted RBP7.72□□□□□ -1.17
CAPN3-216ENST00000567071 FGF9P31371 208 aaPredicted RBP7.72□□□□□ -1.17
CAPN3-216ENST00000567071 GNALP38405 381 aa7.72□□□□□ -1.17
CAPN3-216ENST00000567071 MAP2K3P46734 347 aa7.72□□□□□ -1.17
CAPN3-216ENST00000567071 SERPINB10P48595 397 aa7.72□□□□□ -1.17
CAPN3-216ENST00000567071 TMBIM6P55061 237 aa7.72□□□□□ -1.17
CAPN3-216ENST00000567071 MXD1Q05195 221 aa7.72□□□□□ -1.17
CAPN3-216ENST00000567071 SPCS2Q15005 226 aa7.72□□□□□ -1.17
CAPN3-216ENST00000567071 HSD17B12Q53GQ0 312 aa7.72□□□□□ -1.17
CAPN3-216ENST00000567071 PLA1AQ53H76 456 aa7.72□□□□□ -1.17
CAPN3-216ENST00000567071 LRRC10Q5BKY1 277 aa7.72□□□□□ -1.17
CAPN3-216ENST00000567071 PRAMEF6Q5VXH4 476 aa7.72□□□□□ -1.17
CAPN3-216ENST00000567071 FBXW12Q6X9E4 464 aa7.72□□□□□ -1.17
CAPN3-216ENST00000567071 Q6ZS46 218 aa7.72□□□□□ -1.17
CAPN3-216ENST00000567071 C8orf86Q6ZUL3 223 aa7.72□□□□□ -1.17
CAPN3-216ENST00000567071 PLPP7Q8NBV4 271 aa7.72□□□□□ -1.17
CAPN3-216ENST00000567071 SPSB4Q96A44 273 aa7.72□□□□□ -1.17
CAPN3-216ENST00000567071 C12orf43Q96C57 262 aaKnown RBP7.72□□□□□ -1.17
CAPN3-216ENST00000567071 KCTD7Q96MP8 289 aa7.72□□□□□ -1.17
CAPN3-216ENST00000567071 P2RX4Q99571 388 aa7.72□□□□□ -1.17
CAPN3-216ENST00000567071 FAM192AQ9GZU8 254 aa7.72□□□□□ -1.17
CAPN3-216ENST00000567071 TAS2R4Q9NYW5 299 aa7.72□□□□□ -1.17
CAPN3-216ENST00000567071 NDUFA13Q9P0J0 144 aa7.72□□□□□ -1.17
CAPN3-216ENST00000567071 ZNF391Q9UJN7 358 aa7.72□□□□□ -1.17
CAPN3-216ENST00000567071 GSTK1Q9Y2Q3 226 aa7.72□□□□□ -1.17
CAPN3-216ENST00000567071 DNAH10Q8IVF4 4471 aa7.72□□□□□ -1.17
CAPN3-216ENST00000567071 TRAV8-7A0A075B6U6 113 aa7.71□□□□□ -1.18
CAPN3-216ENST00000567071 SHISA3A0PJX4 238 aa7.71□□□□□ -1.18
CAPN3-216ENST00000567071 NKX6-3A6NJ46 265 aa7.71□□□□□ -1.18
CAPN3-216ENST00000567071 CD300LBA8K4G0 201 aa7.71□□□□□ -1.18
CAPN3-216ENST00000567071 IQCF6A8MYZ5 107 aa7.71□□□□□ -1.18
CAPN3-216ENST00000567071 MTRF1O75570 445 aaKnown RBP7.71□□□□□ -1.18
CAPN3-216ENST00000567071 ARL6IP5O75915 188 aa7.71□□□□□ -1.18
CAPN3-216ENST00000567071 CDRT1O95170 752 aa7.71□□□□□ -1.18
CAPN3-216ENST00000567071 UCHL1P09936 223 aa7.71□□□□□ -1.18
CAPN3-216ENST00000567071 CLEC2LP0C7M8 214 aa7.71□□□□□ -1.18
CAPN3-216ENST00000567071 GALP22466 123 aa7.71□□□□□ -1.18
CAPN3-216ENST00000567071 CD200P41217 278 aa7.71□□□□□ -1.18
CAPN3-216ENST00000567071 ERVFRD-1P60508 538 aa7.71□□□□□ -1.18
CAPN3-216ENST00000567071 RPL23AP62750 156 aaKnown RBP7.71□□□□□ -1.18
CAPN3-216ENST00000567071 RIPPLY1Q0D2K3 151 aa7.71□□□□□ -1.18
CAPN3-216ENST00000567071 FAM90A1Q86YD7 464 aa7.71□□□□□ -1.18
CAPN3-216ENST00000567071 KLHL30-AS1Q8NEE0 82 aa7.71□□□□□ -1.18
CAPN3-216ENST00000567071 OR51A2Q8NGJ7 313 aa7.71□□□□□ -1.18
CAPN3-216ENST00000567071 OR13C9Q8NGT0 318 aa7.71□□□□□ -1.18
CAPN3-216ENST00000567071 THRSPQ92748 146 aa7.71□□□□□ -1.18
CAPN3-216ENST00000567071 FOXRED1Q96CU9 486 aaPredicted RBP7.71□□□□□ -1.18
CAPN3-216ENST00000567071 AKR1E2Q96JD6 320 aa7.71□□□□□ -1.18
CAPN3-216ENST00000567071 SPATA25Q9BR10 227 aa7.71□□□□□ -1.18
CAPN3-216ENST00000567071 DCUN1D5Q9BTE7 237 aa7.71□□□□□ -1.18
CAPN3-216ENST00000567071 PAPOLGQ9BWT3 736 aaKnown RBP7.71□□□□□ -1.18
CAPN3-216ENST00000567071 DCSTAMPQ9H295 470 aa7.71□□□□□ -1.18
CAPN3-216ENST00000567071 OPA3Q9H6K4 179 aa7.71□□□□□ -1.18
CAPN3-216ENST00000567071 GPR173Q9NS66 373 aa7.71□□□□□ -1.18
CAPN3-216ENST00000567071 V9GYS6 101 aa7.71□□□□□ -1.18
CAPN3-216ENST00000567071 hCG_1807616A0A1W2PRN6 198 aa7.7□□□□□ -1.18
CAPN3-216ENST00000567071 SLC22A1O15245 554 aa7.7□□□□□ -1.18
CAPN3-216ENST00000567071 MAS1P04201 325 aa7.7□□□□□ -1.18
CAPN3-216ENST00000567071 AZGP1P25311 298 aaKnown RBP7.7□□□□□ -1.18
CAPN3-216ENST00000567071 SDC2P34741 201 aa7.7□□□□□ -1.18
CAPN3-216ENST00000567071 CAV3P56539 151 aa7.7□□□□□ -1.18
CAPN3-216ENST00000567071 MAB21L1Q13394 359 aa7.7□□□□□ -1.18
CAPN3-216ENST00000567071 MPPED2Q15777 294 aa7.7□□□□□ -1.18
CAPN3-216ENST00000567071 MICBQ29980 383 aa7.7□□□□□ -1.18
CAPN3-216ENST00000567071 CEP78Q5JTW2 689 aa7.7□□□□□ -1.18
CAPN3-216ENST00000567071 Q6ZSR3 168 aa7.7□□□□□ -1.18
CAPN3-216ENST00000567071 OR2W3Q7Z3T1 314 aa7.7□□□□□ -1.18
CAPN3-216ENST00000567071 PARP16Q8N5Y8 322 aa7.7□□□□□ -1.18
CAPN3-216ENST00000567071 CCDC54Q8NEL0 328 aa7.7□□□□□ -1.18
CAPN3-216ENST00000567071 DNAAF1Q8NEP3 725 aa7.7□□□□□ -1.18
CAPN3-216ENST00000567071 TRMT10AQ8TBZ6 339 aaKnown RBP7.7□□□□□ -1.18
CAPN3-216ENST00000567071 DGCR14Q96DF8 476 aaKnown RBP7.7□□□□□ -1.18
CAPN3-216ENST00000567071 CCL13Q99616 98 aa7.7□□□□□ -1.18
CAPN3-216ENST00000567071 BCL7BQ9BQE9 202 aa7.7□□□□□ -1.18
CAPN3-216ENST00000567071 PPP1R3EQ9H7J1 279 aa7.7□□□□□ -1.18
CAPN3-216ENST00000567071 HEXA-AS1Q9H8Q6 139 aa7.7□□□□□ -1.18
CAPN3-216ENST00000567071 CKLFQ9UBR5 152 aa7.7□□□□□ -1.18
CAPN3-216ENST00000567071 RHBDD3Q9Y3P4 386 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms