RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 ERVFRD-1P60508 538 aa14.12□□□□□ -0.15
USB1-209ENST00000564387 AESQ08117 197 aa14.12□□□□□ -0.15
USB1-209ENST00000564387 KLRD1Q13241 179 aa14.12□□□□□ -0.15
USB1-209ENST00000564387 MIDNQ504T8 468 aa14.12□□□□□ -0.15
USB1-209ENST00000564387 SYT6Q5T7P8 510 aaPredicted RBP14.12□□□□□ -0.15
USB1-209ENST00000564387 RBMS3Q6XE24 437 aaKnown RBP14.12□□□□□ -0.15
USB1-209ENST00000564387 SLC25A28Q96A46 364 aa14.12□□□□□ -0.15
USB1-209ENST00000564387 SLITRK2Q9H156 845 aa14.12□□□□□ -0.15
USB1-209ENST00000564387 LINC00574Q9H8X3 128 aa14.12□□□□□ -0.15
USB1-209ENST00000564387 ZMAT3Q9HA38 289 aaKnown RBP14.12□□□□□ -0.15
USB1-209ENST00000564387 TAS2R3Q9NYW6 316 aa14.12□□□□□ -0.15
USB1-209ENST00000564387 TRAV1-2A0A0B4J238 106 aa14.11□□□□□ -0.15
USB1-209ENST00000564387 A0A0U1RQK1 487 aa14.11□□□□□ -0.15
USB1-209ENST00000564387 MDFIC2A0A1B0GVS7 189 aa14.11□□□□□ -0.15
USB1-209ENST00000564387 DNAJC9-AS1A6NH13 148 aa14.11□□□□□ -0.15
USB1-209ENST00000564387 RNF212BA8MTL3 300 aa14.11□□□□□ -0.15
USB1-209ENST00000564387 TRIM77I1YAP6 450 aa14.11□□□□□ -0.15
USB1-209ENST00000564387 IGHV1-8P0DP01 117 aa14.11□□□□□ -0.15
USB1-209ENST00000564387 CFPP27918 469 aa14.11□□□□□ -0.15
USB1-209ENST00000564387 UBA52P62987 128 aaKnown RBP14.11□□□□□ -0.15
USB1-209ENST00000564387 QRFPP83859 136 aa14.11□□□□□ -0.15
USB1-209ENST00000564387 PRB3Q04118 309 aaPredicted RBP14.11□□□□□ -0.15
USB1-209ENST00000564387 PAN3Q58A45 887 aaKnown RBP14.11□□□□□ -0.15
USB1-209ENST00000564387 KRBOX4Q5JUW0 171 aa14.11□□□□□ -0.15
USB1-209ENST00000564387 RSBN1Q5VWQ0 802 aaPredicted RBP14.11□□□□□ -0.15
USB1-209ENST00000564387 LDLRAD3Q86YD5 345 aa14.11□□□□□ -0.15
USB1-209ENST00000564387 PDZD9Q8IXQ8 264 aa14.11□□□□□ -0.15
USB1-209ENST00000564387 SUMF2Q8NBJ7 301 aa14.11□□□□□ -0.15
USB1-209ENST00000564387 OR11H6Q8NGC7 330 aa14.11□□□□□ -0.15
USB1-209ENST00000564387 Q96M66 194 aa14.11□□□□□ -0.15
USB1-209ENST00000564387 DPCDQ9BVM2 203 aaPredicted RBP14.11□□□□□ -0.15
USB1-209ENST00000564387 TRGV10A0A0A0MS01 117 aa14.1□□□□□ -0.15
USB1-209ENST00000564387 SLC17A2O00624 439 aa14.1□□□□□ -0.15
USB1-209ENST00000564387 OR7C1O76099 320 aaPredicted RBP14.1□□□□□ -0.15
USB1-209ENST00000564387 VSIG8P0DPA2 414 aa14.1□□□□□ -0.15
USB1-209ENST00000564387 MGMTP16455 207 aa14.1□□□□□ -0.15
USB1-209ENST00000564387 CALRP27797 417 aaKnown RBP14.1□□□□□ -0.15
USB1-209ENST00000564387 FGF9P31371 208 aaPredicted RBP14.1□□□□□ -0.15
USB1-209ENST00000564387 SAA4P35542 130 aa14.1□□□□□ -0.15
USB1-209ENST00000564387 BAMBIQ13145 260 aa14.1□□□□□ -0.15
USB1-209ENST00000564387 SLC9A3R2Q15599 337 aa14.1□□□□□ -0.15
USB1-209ENST00000564387 TAF9Q16594 264 aa14.1□□□□□ -0.15
USB1-209ENST00000564387 SLC35E4Q6ICL7 350 aa14.1□□□□□ -0.15
USB1-209ENST00000564387 HEPN1Q6WQI6 88 aa14.1□□□□□ -0.15
USB1-209ENST00000564387 TMEM86BQ8N661 226 aa14.1□□□□□ -0.15
USB1-209ENST00000564387 OR6M1Q8NGM8 313 aa14.1□□□□□ -0.15
USB1-209ENST00000564387 PLPPR1Q8TBJ4 325 aa14.1□□□□□ -0.15
USB1-209ENST00000564387 C19orf24Q9BVV8 132 aa14.1□□□□□ -0.15
USB1-209ENST00000564387 BARHL1Q9BZE3 327 aa14.1□□□□□ -0.15
USB1-209ENST00000564387 SPACA1Q9HBV2 294 aa14.1□□□□□ -0.15
USB1-209ENST00000564387 OR6C3Q9NZP0 311 aa14.1□□□□□ -0.15
USB1-209ENST00000564387 SHISA3A0PJX4 238 aa14.09□□□□□ -0.15
USB1-209ENST00000564387 TRIM64CA6NLI5 447 aa14.09□□□□□ -0.15
USB1-209ENST00000564387 TMEM14DPA8MWL7 114 aa14.09□□□□□ -0.15
USB1-209ENST00000564387 GLAP06280 429 aa14.09□□□□□ -0.15
USB1-209ENST00000564387 RNASE1P07998 156 aaKnown RBP14.09□□□□□ -0.15
USB1-209ENST00000564387 MELTFP08582 738 aa14.09□□□□□ -0.15
USB1-209ENST00000564387 PSMB9P28065 219 aa14.09□□□□□ -0.15
USB1-209ENST00000564387 HTR2CP28335 458 aa14.09□□□□□ -0.15
USB1-209ENST00000564387 PSMD7P51665 324 aa14.09□□□□□ -0.15
USB1-209ENST00000564387 ATXN7L3Q14CW9 347 aaPredicted RBP14.09□□□□□ -0.15
USB1-209ENST00000564387 SIGIRRQ6IA17 410 aa14.09□□□□□ -0.15
USB1-209ENST00000564387 GAPTQ8N292 157 aa14.09□□□□□ -0.15
USB1-209ENST00000564387 PNKDQ8N490 385 aa14.09□□□□□ -0.15
USB1-209ENST00000564387 SPATA3Q8NHX4 192 aa14.09□□□□□ -0.15
USB1-209ENST00000564387 CST11Q9H112 138 aa14.09□□□□□ -0.15
USB1-209ENST00000564387 BANF2Q9H503 90 aa14.09□□□□□ -0.15
USB1-209ENST00000564387 FBLN5Q9UBX5 448 aa14.09□□□□□ -0.15
USB1-209ENST00000564387 POMT1Q9Y6A1 747 aa14.09□□□□□ -0.15
USB1-209ENST00000564387 DNHD1Q96M86 4753 aa14.09□□□□□ -0.15
USB1-209ENST00000564387 MEX3AA1L020 520 aaKnown RBP14.08□□□□□ -0.16
USB1-209ENST00000564387 ZNF729A6NN14 1252 aaPredicted RBP14.08□□□□□ -0.16
USB1-209ENST00000564387 ODF3BA8MYP8 253 aa14.08□□□□□ -0.16
USB1-209ENST00000564387 MMP23AO75900 390 aa14.08□□□□□ -0.16
USB1-209ENST00000564387 CLPXO76031 633 aa14.08□□□□□ -0.16
USB1-209ENST00000564387 TNFAIP8O95379 198 aa14.08□□□□□ -0.16
USB1-209ENST00000564387 BPNT1O95861 308 aa14.08□□□□□ -0.16
USB1-209ENST00000564387 UNC119Q13432 240 aa14.08□□□□□ -0.16
USB1-209ENST00000564387 C17orf58Q2M2W7 97 aa14.08□□□□□ -0.16
USB1-209ENST00000564387 ZNF626Q68DY1 528 aa14.08□□□□□ -0.16
USB1-209ENST00000564387 KCNG3Q8TAE7 436 aa14.08□□□□□ -0.16
USB1-209ENST00000564387 TM2D1Q9BX74 207 aa14.08□□□□□ -0.16
USB1-209ENST00000564387 SELENOIQ9C0D9 397 aa14.08□□□□□ -0.16
USB1-209ENST00000564387 GAL3ST2Q9H3Q3 398 aa14.08□□□□□ -0.16
USB1-209ENST00000564387 ZNF696Q9H7X3 374 aa14.08□□□□□ -0.16
USB1-209ENST00000564387 KIF25Q9UIL4 384 aa14.08□□□□□ -0.16
USB1-209ENST00000564387 AK6Q9Y3D8 172 aaKnown RBP14.08□□□□□ -0.16
USB1-209ENST00000564387 SESN1Q9Y6P5 492 aa14.08□□□□□ -0.16
USB1-209ENST00000564387 A0A087X0M5 115 aa14.07□□□□□ -0.16
USB1-209ENST00000564387 KBTBD11-OT1A0A1B0GTJ5 212 aa14.07□□□□□ -0.16
USB1-209ENST00000564387 A0A1B0GX30 115 aa14.07□□□□□ -0.16
USB1-209ENST00000564387 MEIOCA2RUB1 952 aa14.07□□□□□ -0.16
USB1-209ENST00000564387 NPIPB11E5RHQ5 1161 aa14.07□□□□□ -0.16
USB1-209ENST00000564387 H3BUI4 141 aa14.07□□□□□ -0.16
USB1-209ENST00000564387 HSPB6O14558 160 aa14.07□□□□□ -0.16
USB1-209ENST00000564387 HOXA3O43365 443 aaPredicted RBP14.07□□□□□ -0.16
USB1-209ENST00000564387 CRTAPO75718 401 aaPredicted RBP14.07□□□□□ -0.16
USB1-209ENST00000564387 FBP1P09467 338 aa14.07□□□□□ -0.16
USB1-209ENST00000564387 CD34P28906 385 aa14.07□□□□□ -0.16
USB1-209ENST00000564387 IER3P46695 156 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms