RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 ARMC1Q9NVT9 282 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 FRRS1LQ9P0K9 344 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 ACTR3BQ9P1U1 418 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 STUB1Q9UNE7 303 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 BAIAP2Q9UQB8 552 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 WSB1Q9Y6I7 421 aa5.88□□□□□ -1.47
HERPUD1-206ENST00000563343 DNAH17Q9UFH2 4485 aa5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 NUPR2A6NF83 97 aa5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 A6NHS1 94 aa5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 DHRS7CA6NNS2 312 aa5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 ZNF736B4DX44 427 aaPredicted RBP5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 NPIPB11E5RHQ5 1161 aa5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 HSD17B6O14756 317 aa5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 ATP6V0E1O15342 81 aa5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 SOX14O95416 240 aa5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 IFNGP01579 166 aa5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 CALCBP10092 127 aa5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 H2AFXP16104 143 aaPredicted RBP5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 PRKACAP17612 351 aa5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 BCL3P20749 454 aa5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 SOX6P35712 828 aa5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 REG1BP48304 166 aa5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 HMGA2P52926 109 aa5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 ROM1Q03395 351 aa5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 SF3A3Q12874 501 aaKnown RBP eCLIP5.87□□□□□ -1.471e-8■■□□□ 12.2
HERPUD1-206ENST00000563343 GALEQ14376 348 aa5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 SPIN3Q5JUX0 258 aa5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 TMEM65Q6PI78 240 aa5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 FAM58AQ8N1B3 248 aa5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 MINDY2Q8NBR6 621 aa5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 OR2T33Q8NG76 320 aa5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 HAVCR2Q8TDQ0 301 aa5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 LRGUKQ96M69 825 aa5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 RASL11BQ9BPW5 248 aa5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 RSRP1Q9BUV0 290 aa5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 TMED9Q9BVK6 235 aa5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 OSBPL10Q9BXB5 764 aa5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 COMMD4Q9H0A8 199 aa5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 OR51V1Q9H2C8 321 aa5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 CHCHD3Q9NX63 227 aaKnown RBP5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 GLS2Q9UI32 602 aa5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 SAMD4AQ9UPU9 718 aaKnown RBP5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 V9GYQ6 96 aa5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 V9GYY5 206 aaPredicted RBP5.87□□□□□ -1.47
HERPUD1-206ENST00000563343 A0A0G2JND7 137 aa5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 FUOMA2VDF0 154 aa5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 RIIAD1A6NNX1 92 aa5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 EDF1O60869 148 aaKnown RBP5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 E2F6O75461 281 aa5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 RGS11O94810 467 aa5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 MOSP00540 346 aa5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 CCL1P22362 96 aa5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 CD1BP29016 333 aa5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 VHLP40337 213 aa5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 GNG10P50151 68 aa5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 SNU13P55769 128 aaKnown RBP5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 PMS2P11Q13670 270 aa5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 MAPRE2Q15555 327 aa5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 KRBOX4Q5JUW0 171 aa5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 SAMD4BQ5PRF9 694 aaKnown RBP5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 LGALS9CQ6DKI2 356 aa5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 GLYATQ6IB77 296 aa5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 Q6P435 159 aa5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 CEMP1Q6PRD7 247 aaPredicted RBP5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 IL34Q6ZMJ4 242 aa5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 MOB3BQ86TA1 216 aa5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 Q8IYB0 196 aa5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 OR8H1Q8NGG4 311 aa5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 OR13A1Q8NGR1 328 aa5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 PYURFQ96I23 114 aa5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 SIKE1Q9BRV8 207 aa5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 TUBA4BQ9H853 241 aa5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 HMG20AQ9NP66 347 aa5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 CALYQ9NYX4 217 aa5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 IDI2-AS1Q9NZ38 188 aa5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 ABCD2Q9UBJ2 740 aa5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 ZNF107Q9UII5 783 aaPredicted RBP5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 RAB21Q9UL25 225 aa5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 COPS3Q9UNS2 423 aa5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 MRPS28Q9Y2Q9 187 aaKnown RBP5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 DNAH11Q96DT5 4516 aa5.86□□□□□ -1.47
HERPUD1-206ENST00000563343 IGHV7-81A0A0B4J1V7 117 aa5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 TRAV41A0A0B4J266 112 aa5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 IGKV1-12A0A0C4DH73 117 aa5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 A0A1W2PPE3 182 aa5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 SHISA3A0PJX4 238 aa5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 IZUMO1RA6ND01 250 aa5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 SLC33A1O00400 549 aaPredicted RBP5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 ZNF254O75437 659 aa5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 IL1AP01583 271 aa5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 IGKV1D-12P01611 117 aa5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 GAPDHP04406 335 aaKnown RBP5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 HSPB1P04792 205 aaKnown RBP5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 SLC2A5P22732 501 aa5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 HTR1FP30939 366 aa5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 FUT6P51993 359 aa5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 ATXN7L3Q14CW9 347 aaPredicted RBP5.85□□□□□ -1.47
HERPUD1-206ENST00000563343 SLC16A12Q6ZSM3 486 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms