RNA–Protein interactions for RNA: ENST00000561954.1

IFT140-205, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-205ENST00000561954 RIPPLY3P57055 190 aa11.52□□□□□ -0.57
IFT140-205ENST00000561954 QRFPP83859 136 aa11.52□□□□□ -0.57
IFT140-205ENST00000561954 GUCA2AQ02747 115 aa11.52□□□□□ -0.57
IFT140-205ENST00000561954 UNC119Q13432 240 aa11.52□□□□□ -0.57
IFT140-205ENST00000561954 TMEM200BQ69YZ2 307 aa11.52□□□□□ -0.57
IFT140-205ENST00000561954 RAB12Q6IQ22 244 aa11.52□□□□□ -0.57
IFT140-205ENST00000561954 SFXN4Q6P4A7 337 aa11.52□□□□□ -0.57
IFT140-205ENST00000561954 METAP1DQ6UB28 335 aaPredicted RBP11.52□□□□□ -0.57
IFT140-205ENST00000561954 C1orf229Q6ZS94 237 aaPredicted RBP11.52□□□□□ -0.57
IFT140-205ENST00000561954 VMO1Q7Z5L0 202 aa11.52□□□□□ -0.57
IFT140-205ENST00000561954 OR51D1Q8NGF3 324 aa11.52□□□□□ -0.57
IFT140-205ENST00000561954 NEDD4LQ96PU5 975 aa11.52□□□□□ -0.57
IFT140-205ENST00000561954 TM2D1Q9BX74 207 aa11.52□□□□□ -0.57
IFT140-205ENST00000561954 NCOR1P1Q9H4R4 102 aa11.52□□□□□ -0.57
IFT140-205ENST00000561954 UNKLQ9H9P5 680 aaKnown RBP11.52□□□□□ -0.57
IFT140-205ENST00000561954 LIN7BQ9HAP6 207 aa11.52□□□□□ -0.57
IFT140-205ENST00000561954 SCOCQ9UIL1 159 aa11.52□□□□□ -0.57
IFT140-205ENST00000561954 NUP50Q9UKX7 468 aa11.52□□□□□ -0.57
IFT140-205ENST00000561954 NIPBLQ6KC79 2804 aaeCLIP11.52□□□□□ -0.57
IFT140-205ENST00000561954 SONP18583 2426 aaKnown RBP11.51□□□□□ -0.57
IFT140-205ENST00000561954 TMEM30CPA0ZSE6 113 aa11.51□□□□□ -0.57
IFT140-205ENST00000561954 MCRIP1C9JLW8 97 aa11.51□□□□□ -0.57
IFT140-205ENST00000561954 CLPXO76031 633 aa11.51□□□□□ -0.57
IFT140-205ENST00000561954 AVPP01185 164 aa11.51□□□□□ -0.57
IFT140-205ENST00000561954 IFNA2P01563 188 aa11.51□□□□□ -0.57
IFT140-205ENST00000561954 ZNF728P0DKX0 622 aa11.51□□□□□ -0.57
IFT140-205ENST00000561954 FUT3P21217 361 aa11.51□□□□□ -0.57
IFT140-205ENST00000561954 EPHA1P21709 976 aa11.51□□□□□ -0.57
IFT140-205ENST00000561954 CLDN12P56749 244 aa11.51□□□□□ -0.57
IFT140-205ENST00000561954 SCAND1P57086 179 aa11.51□□□□□ -0.57
IFT140-205ENST00000561954 ERVFRD-1P60508 538 aa11.51□□□□□ -0.57
IFT140-205ENST00000561954 AESQ08117 197 aa11.51□□□□□ -0.57
IFT140-205ENST00000561954 ZNF273Q14593 569 aa11.51□□□□□ -0.57
IFT140-205ENST00000561954 PTX4Q96A99 478 aa11.51□□□□□ -0.57
IFT140-205ENST00000561954 COQ2Q96H96 371 aa11.51□□□□□ -0.57
IFT140-205ENST00000561954 TBX15Q96SF7 602 aa11.51□□□□□ -0.57
IFT140-205ENST00000561954 FN1P02751 2386 aaKnown RBP11.51□□□□□ -0.57
IFT140-205ENST00000561954 MEIKINA0A087WXM9 373 aa11.5□□□□□ -0.57
IFT140-205ENST00000561954 GABARAPO95166 117 aa11.5□□□□□ -0.57
IFT140-205ENST00000561954 IL1AP01583 271 aa11.5□□□□□ -0.57
IFT140-205ENST00000561954 TFAP2AP05549 437 aa11.5□□□□□ -0.57
IFT140-205ENST00000561954 RAB6AP20340 208 aa11.5□□□□□ -0.57
IFT140-205ENST00000561954 PRTN3P24158 256 aa11.5□□□□□ -0.57
IFT140-205ENST00000561954 FPR2P25090 351 aa11.5□□□□□ -0.57
IFT140-205ENST00000561954 GLP1RP43220 463 aa11.5□□□□□ -0.57
IFT140-205ENST00000561954 ALDH3B2P48448 385 aa11.5□□□□□ -0.57
IFT140-205ENST00000561954 MXD1Q05195 221 aa11.5□□□□□ -0.57
IFT140-205ENST00000561954 SLC35E4Q6ICL7 350 aa11.5□□□□□ -0.57
IFT140-205ENST00000561954 OR10K2Q6IF99 312 aa11.5□□□□□ -0.57
IFT140-205ENST00000561954 ANKRD13BQ86YJ7 626 aa11.5□□□□□ -0.57
IFT140-205ENST00000561954 BPIFB2Q8N4F0 458 aa11.5□□□□□ -0.57
IFT140-205ENST00000561954 TPRX1Q8N7U7 411 aa11.5□□□□□ -0.57
IFT140-205ENST00000561954 OR56B1Q8NGI3 324 aa11.5□□□□□ -0.57
IFT140-205ENST00000561954 KCNK15Q9H427 330 aa11.5□□□□□ -0.57
IFT140-205ENST00000561954 RAB9BQ9NP90 201 aa11.5□□□□□ -0.57
IFT140-205ENST00000561954 SIRT7Q9NRC8 400 aa11.5□□□□□ -0.57
IFT140-205ENST00000561954 ETAA1Q9NY74 926 aa11.5□□□□□ -0.57
IFT140-205ENST00000561954 TAS2R3Q9NYW6 316 aa11.5□□□□□ -0.57
IFT140-205ENST00000561954 DAPK2Q9UIK4 370 aa11.5□□□□□ -0.57
IFT140-205ENST00000561954 RAB22AQ9UL26 194 aa11.5□□□□□ -0.57
IFT140-205ENST00000561954 PEX16Q9Y5Y5 336 aa11.5□□□□□ -0.57
IFT140-205ENST00000561954 TMEM272A0A1B0GTI8 110 aa11.49□□□□□ -0.57
IFT140-205ENST00000561954 SMIM30A4D0T7 59 aa11.49□□□□□ -0.57
IFT140-205ENST00000561954 C17orf98A8MV24 154 aa11.49□□□□□ -0.57
IFT140-205ENST00000561954 LDLRAD4O15165 306 aa11.49□□□□□ -0.57
IFT140-205ENST00000561954 NOL3O60936 208 aaKnown RBP11.49□□□□□ -0.57
IFT140-205ENST00000561954 SCGNO76038 276 aa11.49□□□□□ -0.57
IFT140-205ENST00000561954 CCL3L1P16619 93 aa11.49□□□□□ -0.57
IFT140-205ENST00000561954 HOXB4P17483 251 aaPredicted RBP11.49□□□□□ -0.57
IFT140-205ENST00000561954 CHATP28329 748 aa11.49□□□□□ -0.57
IFT140-205ENST00000561954 RPL5P46777 297 aaKnown RBP11.49□□□□□ -0.57
IFT140-205ENST00000561954 GLIPR1P48060 266 aa11.49□□□□□ -0.57
IFT140-205ENST00000561954 C2orf76Q3KRA6 126 aa11.49□□□□□ -0.57
IFT140-205ENST00000561954 NKAPLQ5M9Q1 402 aa11.49□□□□□ -0.57
IFT140-205ENST00000561954 RSBN1Q5VWQ0 802 aaPredicted RBP11.49□□□□□ -0.57
IFT140-205ENST00000561954 C9orf139Q6ZV77 190 aa11.49□□□□□ -0.57
IFT140-205ENST00000561954 TCF23Q7RTU1 214 aa11.49□□□□□ -0.57
IFT140-205ENST00000561954 NR2C2APQ86WQ0 139 aa11.49□□□□□ -0.57
IFT140-205ENST00000561954 Q8N7P7 452 aa11.49□□□□□ -0.57
IFT140-205ENST00000561954 ZNF565Q8N9K5 539 aa11.49□□□□□ -0.57
IFT140-205ENST00000561954 CORO2AQ92828 525 aa11.49□□□□□ -0.57
IFT140-205ENST00000561954 LHX4Q969G2 390 aa11.49□□□□□ -0.57
IFT140-205ENST00000561954 MS4A7Q9GZW8 240 aaPredicted RBP11.49□□□□□ -0.57
IFT140-205ENST00000561954 LPAR5Q9H1C0 372 aa11.49□□□□□ -0.57
IFT140-205ENST00000561954 RNF167Q9H6Y7 350 aa11.49□□□□□ -0.57
IFT140-205ENST00000561954 HEXA-AS1Q9H8Q6 139 aa11.49□□□□□ -0.57
IFT140-205ENST00000561954 KIF25Q9UIL4 384 aa11.49□□□□□ -0.57
IFT140-205ENST00000561954 ETV7Q9Y603 341 aa11.49□□□□□ -0.57
IFT140-205ENST00000561954 ZFHX3Q15911 3703 aa11.48□□□□□ -0.57
IFT140-205ENST00000561954 IGHV1-69DA0A0B4J2H0 117 aa11.48□□□□□ -0.57
IFT140-205ENST00000561954 METTL21EPA6NDL7 271 aa11.48□□□□□ -0.57
IFT140-205ENST00000561954 ZNF729A6NN14 1252 aaPredicted RBP11.48□□□□□ -0.57
IFT140-205ENST00000561954 IGHV1-69P01742 117 aa11.48□□□□□ -0.57
IFT140-205ENST00000561954 IGHV4-38-2P0DP08 117 aa11.48□□□□□ -0.57
IFT140-205ENST00000561954 DLX6P56179 175 aa11.48□□□□□ -0.57
IFT140-205ENST00000561954 LSM3P62310 102 aaKnown RBP11.48□□□□□ -0.57
IFT140-205ENST00000561954 KLF17Q5JT82 389 aaPredicted RBP11.48□□□□□ -0.57
IFT140-205ENST00000561954 OR52W1Q6IF63 320 aa11.48□□□□□ -0.57
IFT140-205ENST00000561954 TRAT1Q6PIZ9 186 aa11.48□□□□□ -0.57
IFT140-205ENST00000561954 ZNF497Q6ZNH5 498 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms