RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 MRPS24Q96EL2 167 aaKnown RBP12.91□□□□□ -0.34
LMX1B-204ENST00000561065 RAB18Q9NP72 206 aa12.91□□□□□ -0.34
LMX1B-204ENST00000561065 TAS2R3Q9NYW6 316 aa12.91□□□□□ -0.34
LMX1B-204ENST00000561065 SIRT4Q9Y6E7 314 aaPredicted RBP12.91□□□□□ -0.34
LMX1B-204ENST00000561065 GABRPO00591 440 aa12.9□□□□□ -0.34
LMX1B-204ENST00000561065 RGS10O43665 173 aa12.9□□□□□ -0.34
LMX1B-204ENST00000561065 LALBAP00709 142 aa12.9□□□□□ -0.34
LMX1B-204ENST00000561065 IGHV1-8P0DP01 117 aa12.9□□□□□ -0.34
LMX1B-204ENST00000561065 GTF2F2P13984 249 aa12.9□□□□□ -0.34
LMX1B-204ENST00000561065 JUNBP17275 347 aaPredicted RBP12.9□□□□□ -0.34
LMX1B-204ENST00000561065 FSTP19883 344 aa12.9□□□□□ -0.34
LMX1B-204ENST00000561065 VHLP40337 213 aa12.9□□□□□ -0.34
LMX1B-204ENST00000561065 OR3A1P47881 315 aa12.9□□□□□ -0.34
LMX1B-204ENST00000561065 ARHGDIBP52566 201 aa12.9□□□□□ -0.34
LMX1B-204ENST00000561065 EFNB2P52799 333 aa12.9□□□□□ -0.34
LMX1B-204ENST00000561065 KIAA2026Q5HYC2 2103 aa12.9□□□□□ -0.34
LMX1B-204ENST00000561065 KRBOX4Q5JUW0 171 aa12.9□□□□□ -0.34
LMX1B-204ENST00000561065 RBM48Q5RL73 367 aaKnown RBP12.9□□□□□ -0.34
LMX1B-204ENST00000561065 LAIR2Q6ISS4 152 aa12.9□□□□□ -0.34
LMX1B-204ENST00000561065 OSR2Q8N2R0 312 aa12.9□□□□□ -0.34
LMX1B-204ENST00000561065 NKAIN3Q8N8D7 197 aa12.9□□□□□ -0.34
LMX1B-204ENST00000561065 Q8NFD4 153 aa12.9□□□□□ -0.34
LMX1B-204ENST00000561065 OR4D6Q8NGJ1 314 aa12.9□□□□□ -0.34
LMX1B-204ENST00000561065 CORO2AQ92828 525 aa12.9□□□□□ -0.34
LMX1B-204ENST00000561065 CREB3L1Q96BA8 519 aa12.9□□□□□ -0.34
LMX1B-204ENST00000561065 MALSU1Q96EH3 234 aa12.9□□□□□ -0.34
LMX1B-204ENST00000561065 PGLYRP3Q96LB9 341 aa12.9□□□□□ -0.34
LMX1B-204ENST00000561065 ZNF184Q99676 751 aaPredicted RBP12.9□□□□□ -0.34
LMX1B-204ENST00000561065 CCDC90BQ9GZT6 254 aa12.9□□□□□ -0.34
LMX1B-204ENST00000561065 NCOR1P1Q9H4R4 102 aa12.9□□□□□ -0.34
LMX1B-204ENST00000561065 DUSP21Q9H596 190 aa12.9□□□□□ -0.34
LMX1B-204ENST00000561065 SPACA1Q9HBV2 294 aa12.9□□□□□ -0.34
LMX1B-204ENST00000561065 TCF7L1Q9HCS4 588 aa12.9□□□□□ -0.34
LMX1B-204ENST00000561065 IL36GQ9NZH8 169 aa12.9□□□□□ -0.34
LMX1B-204ENST00000561065 TBL2Q9Y4P3 447 aaKnown RBP12.9□□□□□ -0.34
LMX1B-204ENST00000561065 PNMA8CA0A1B0GUJ8 204 aa12.89□□□□□ -0.35
LMX1B-204ENST00000561065 M0QZ24 198 aa12.89□□□□□ -0.35
LMX1B-204ENST00000561065 TIMM23O14925 209 aa12.89□□□□□ -0.35
LMX1B-204ENST00000561065 MMP23AO75900 390 aa12.89□□□□□ -0.35
LMX1B-204ENST00000561065 ARG1P05089 322 aa12.89□□□□□ -0.35
LMX1B-204ENST00000561065 IGFBP3P17936 291 aaPredicted RBP12.89□□□□□ -0.35
LMX1B-204ENST00000561065 PSMA1P25786 263 aaKnown RBP12.89□□□□□ -0.35
LMX1B-204ENST00000561065 GABRA5P31644 462 aa12.89□□□□□ -0.35
LMX1B-204ENST00000561065 SLC35A2P78381 396 aa12.89□□□□□ -0.35
LMX1B-204ENST00000561065 DYNC1I2Q13409 638 aaKnown RBP12.89□□□□□ -0.35
LMX1B-204ENST00000561065 PAN3Q58A45 887 aaKnown RBP12.89□□□□□ -0.35
LMX1B-204ENST00000561065 CCBE1Q6UXH8 406 aaPredicted RBP12.89□□□□□ -0.35
LMX1B-204ENST00000561065 RTN4RL2Q86UN3 420 aa12.89□□□□□ -0.35
LMX1B-204ENST00000561065 JAGN1Q8N5M9 183 aa12.89□□□□□ -0.35
LMX1B-204ENST00000561065 ZFP41Q8N8Y5 198 aa12.89□□□□□ -0.35
LMX1B-204ENST00000561065 OR11H6Q8NGC7 330 aa12.89□□□□□ -0.35
LMX1B-204ENST00000561065 UFD1Q92890 307 aa12.89□□□□□ -0.35
LMX1B-204ENST00000561065 OR14A2Q96R54 314 aa12.89□□□□□ -0.35
LMX1B-204ENST00000561065 RAB9BQ9NP90 201 aa12.89□□□□□ -0.35
LMX1B-204ENST00000561065 ISYNA1Q9NPH2 558 aa12.89□□□□□ -0.35
LMX1B-204ENST00000561065 ABCB10Q9NRK6 738 aa12.89□□□□□ -0.35
LMX1B-204ENST00000561065 GHRLQ9UBU3 117 aa12.89□□□□□ -0.35
LMX1B-204ENST00000561065 FBLN5Q9UBX5 448 aa12.89□□□□□ -0.35
LMX1B-204ENST00000561065 ST3GAL6Q9Y274 331 aa12.89□□□□□ -0.35
LMX1B-204ENST00000561065 SESN1Q9Y6P5 492 aa12.89□□□□□ -0.35
LMX1B-204ENST00000561065 TRBV5-7A0A0A0MS05 114 aa12.88□□□□□ -0.35
LMX1B-204ENST00000561065 VGLL3A8MV65 326 aa12.88□□□□□ -0.35
LMX1B-204ENST00000561065 SLC33A1O00400 549 aaPredicted RBP12.88□□□□□ -0.35
LMX1B-204ENST00000561065 ATP6V1G2O95670 118 aa12.88□□□□□ -0.35
LMX1B-204ENST00000561065 RAB13P51153 203 aa12.88□□□□□ -0.35
LMX1B-204ENST00000561065 RPS11P62280 158 aaKnown RBP eCLIP12.88□□□□□ -0.35
LMX1B-204ENST00000561065 DEFA6Q01524 100 aa12.88□□□□□ -0.35
LMX1B-204ENST00000561065 RBM39Q14498 530 aaKnown RBP12.88□□□□□ -0.35
LMX1B-204ENST00000561065 MPV17LQ2QL34 196 aa12.88□□□□□ -0.35
LMX1B-204ENST00000561065 ACSM3Q53FZ2 586 aa12.88□□□□□ -0.35
LMX1B-204ENST00000561065 NHLRC3Q5JS37 347 aa12.88□□□□□ -0.35
LMX1B-204ENST00000561065 MINOS1Q5TGZ0 78 aa12.88□□□□□ -0.35
LMX1B-204ENST00000561065 Q6P435 159 aa12.88□□□□□ -0.35
LMX1B-204ENST00000561065 BAIAP2L2Q6UXY1 529 aa12.88□□□□□ -0.35
LMX1B-204ENST00000561065 PRSS48Q7RTY5 328 aa12.88□□□□□ -0.35
LMX1B-204ENST00000561065 PHYHIPQ92561 330 aa12.88□□□□□ -0.35
LMX1B-204ENST00000561065 DERL3Q96Q80 235 aa12.88□□□□□ -0.35
LMX1B-204ENST00000561065 UQCC2Q9BRT2 126 aa12.88□□□□□ -0.35
LMX1B-204ENST00000561065 MMP27Q9H306 513 aa12.88□□□□□ -0.35
LMX1B-204ENST00000561065 MINOS1-NBL1R4GNA1 71 aa12.88□□□□□ -0.35
LMX1B-204ENST00000561065 DNAH3Q8TD57 4116 aa12.88□□□□□ -0.35
LMX1B-204ENST00000561065 ODAMA1E959 279 aa12.88□□□□□ -0.35
LMX1B-204ENST00000561065 ZNF729A6NN14 1252 aaPredicted RBP12.88□□□□□ -0.35
LMX1B-204ENST00000561065 OR7C1O76099 320 aaPredicted RBP12.88□□□□□ -0.35
LMX1B-204ENST00000561065 MAS1P04201 325 aa12.88□□□□□ -0.35
LMX1B-204ENST00000561065 UBBP0CG47 229 aa12.88□□□□□ -0.35
LMX1B-204ENST00000561065 GZMHP20718 246 aa12.88□□□□□ -0.35
LMX1B-204ENST00000561065 PRRX1P54821 245 aa12.88□□□□□ -0.35
LMX1B-204ENST00000561065 AESQ08117 197 aa12.88□□□□□ -0.35
LMX1B-204ENST00000561065 SLC22A6Q4U2R8 563 aa12.88□□□□□ -0.35
LMX1B-204ENST00000561065 GLT8D1Q68CQ7 371 aa12.88□□□□□ -0.35
LMX1B-204ENST00000561065 HEPN1Q6WQI6 88 aa12.88□□□□□ -0.35
LMX1B-204ENST00000561065 LIAT1Q6ZQX7 453 aa12.88□□□□□ -0.35
LMX1B-204ENST00000561065 ZNF596Q8TC21 504 aa12.88□□□□□ -0.35
LMX1B-204ENST00000561065 CNBD2Q96M20 576 aa12.88□□□□□ -0.35
LMX1B-204ENST00000561065 CLEC7AQ9BXN2 247 aa12.88□□□□□ -0.35
LMX1B-204ENST00000561065 TMEM133Q9H2Q1 129 aa12.88□□□□□ -0.35
LMX1B-204ENST00000561065 RANBP3Q9H6Z4 567 aaPredicted RBP12.88□□□□□ -0.35
LMX1B-204ENST00000561065 IFT22Q9H7X7 185 aa12.88□□□□□ -0.35
LMX1B-204ENST00000561065 ZNF702PQ9H963 129 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms