RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 HSPB8Q9UJY1 196 aa11.64□□□□□ -0.55
CSPG4P11-201ENST00000560634 CSN3P07498 182 aa11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 CXCL3P19876 107 aa11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 NCMAPQ5T1S8 102 aa11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 OR1B1Q8NGR6 318 aa11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 PTX4Q96A99 478 aa11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 RSRP1Q9BUV0 290 aa11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 TRAF4Q9BUZ4 470 aaPredicted RBP11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 MIXL1Q9H2W2 232 aa11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 PLAC1Q9HBJ0 212 aa11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 NAGKQ9UJ70 344 aa11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 CES1P1Q9UKY3 287 aa11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 NHSL1Q5SYE7 1610 aa11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 TRBV5-3A0A0A0MS03 114 aa11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 C3orf80F5H4A9 247 aa11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 ISLRO14498 428 aa11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 DNPH1O43598 174 aa11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 HIST1H1EP10412 219 aaKnown RBP11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 NXPH1P58417 271 aa11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 C19orf57Q0VDD7 668 aa11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 DPPA3Q6W0C5 159 aa11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 DEFB123Q8N688 67 aa11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 OR4P4Q8NGL7 312 aa11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 NUDT16L1Q9BRJ7 211 aaKnown RBP11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 MSL2Q9HCI7 577 aa11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 LYZL6O75951 148 aa11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 EPHA8P29322 1005 aaPredicted RBP11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 EWSR1Q01844 656 aaKnown RBP eCLIP11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 GAPTQ8N292 157 aa11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 Q8WTZ3 238 aa11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 NEU3Q9UQ49 428 aa11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 UFC1Q9Y3C8 167 aa11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 A0A1W2PR80 420 aa11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 HELTA6NFD8 242 aa11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 KLF9Q13886 244 aaPredicted RBP11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 IRF3Q14653 427 aa11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 KHDC3LQ587J8 217 aa11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 RAB33BQ9H082 229 aa11.63□□□□□ -0.55
CSPG4P11-201ENST00000560634 NWD2Q9ULI1 1742 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 FAM157CP0CG43 387 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 PKIAP61925 76 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 SFTPA2Q8IWL1 248 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 SFTPA1Q8IWL2 248 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 D2HGDHQ8N465 521 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 ISOC2Q96AB3 205 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 SNX22Q96L94 193 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 FLRT3Q9NZU0 649 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 OR2W1Q9Y3N9 320 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 PLA2G10O15496 165 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 LINC01565O15544 149 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 C1QAP02745 245 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 TMIGD3P0DMS9 266 aaPredicted RBP11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 PSG6Q00889 435 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 SPINK9Q5DT21 86 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 ZNF788Q6ZQV5 615 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 LINC00596Q86U02 117 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 OR5A2Q8NGI9 324 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 OR2Y1Q8NGV0 311 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 RNF133Q8WVZ7 376 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 MRPL24Q96A35 216 aaKnown RBP11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 EID2BQ96D98 161 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 ATG101Q9BSB4 218 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 AP5S1Q9NUS5 200 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 MFSD2BA6NFX1 497 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 H3BQ15 152 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 K7ERU9 68 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 PATE4P0C8F1 98 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 CD40P25942 277 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 NAAAQ02083 359 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 CD226Q15762 336 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 OR5R1Q8NH85 324 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 CLEC5AQ9NY25 188 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 FFAR1O14842 300 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 CXorf1O96002 111 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 PMELP40967 661 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 DLX1P56177 255 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 LGALSLQ3ZCW2 172 aaPredicted RBP11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 TSPO2Q5TGU0 170 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 TMEM65Q6PI78 240 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 CBLN2Q8IUK8 224 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 RASL10BQ96S79 203 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 CCL28Q9NRJ3 127 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 MRPS18AQ9NVS2 196 aaKnown RBP11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 MIOXQ9UGB7 285 aa11.62□□□□□ -0.55
CSPG4P11-201ENST00000560634 CD99P14209 185 aa11.61□□□□□ -0.55
CSPG4P11-201ENST00000560634 MPLP40238 635 aa11.61□□□□□ -0.55
CSPG4P11-201ENST00000560634 TCL1AP56279 114 aa11.61□□□□□ -0.55
CSPG4P11-201ENST00000560634 OR1L6Q8NGR2 347 aa11.61□□□□□ -0.55
CSPG4P11-201ENST00000560634 ASB5Q8WWX0 329 aa11.61□□□□□ -0.55
CSPG4P11-201ENST00000560634 ADIPOR1Q96A54 375 aa11.61□□□□□ -0.55
CSPG4P11-201ENST00000560634 GPX7Q96SL4 187 aaPredicted RBP11.61□□□□□ -0.55
CSPG4P11-201ENST00000560634 HEXA-AS1Q9H8Q6 139 aa11.61□□□□□ -0.55
CSPG4P11-201ENST00000560634 BTAF1O14981 1849 aa11.61□□□□□ -0.55
CSPG4P11-201ENST00000560634 GEMIN2O14893 280 aaKnown RBP11.61□□□□□ -0.55
CSPG4P11-201ENST00000560634 RPLP1P05386 114 aaKnown RBP11.61□□□□□ -0.55
CSPG4P11-201ENST00000560634 CD3EP07766 207 aa11.61□□□□□ -0.55
CSPG4P11-201ENST00000560634 B2MP61769 119 aa11.61□□□□□ -0.55
CSPG4P11-201ENST00000560634 DHRS13Q6UX07 377 aa11.61□□□□□ -0.55
CSPG4P11-201ENST00000560634 OR8I2Q8N0Y5 310 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms