RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 C3AR1Q16581 482 aa8.29□□□□□ -1.08
RTF1-206ENST00000560447 HIKESHIQ53FT3 197 aa8.29□□□□□ -1.08
RTF1-206ENST00000560447 BEX5Q5H9J7 111 aa8.29□□□□□ -1.08
RTF1-206ENST00000560447 SPIN3Q5JUX0 258 aa8.29□□□□□ -1.08
RTF1-206ENST00000560447 ZNF585AQ6P3V2 769 aa8.29□□□□□ -1.08
RTF1-206ENST00000560447 FIP1L1Q6UN15 594 aaKnown RBP8.29□□□□□ -1.08
RTF1-206ENST00000560447 GAPTQ8N292 157 aa8.29□□□□□ -1.08
RTF1-206ENST00000560447 ZNF565Q8N9K5 539 aa8.29□□□□□ -1.08
RTF1-206ENST00000560447 SPERTQ8NA61 448 aa8.29□□□□□ -1.08
RTF1-206ENST00000560447 UBAC2Q8NBM4 344 aa8.29□□□□□ -1.08
RTF1-206ENST00000560447 CLEC18CQ8NCF0 446 aa8.29□□□□□ -1.08
RTF1-206ENST00000560447 DEFB124Q8NES8 71 aa8.29□□□□□ -1.08
RTF1-206ENST00000560447 GLYATL2Q8WU03 294 aa8.29□□□□□ -1.08
RTF1-206ENST00000560447 MRPL24Q96A35 216 aaKnown RBP8.29□□□□□ -1.08
RTF1-206ENST00000560447 TMEM222Q9H0R3 208 aa8.29□□□□□ -1.08
RTF1-206ENST00000560447 ARV1Q9H2C2 271 aa8.29□□□□□ -1.08
RTF1-206ENST00000560447 NARFLQ9H6Q4 476 aa8.29□□□□□ -1.08
RTF1-206ENST00000560447 C12orf49Q9H741 205 aa8.29□□□□□ -1.08
RTF1-206ENST00000560447 PARD6AQ9NPB6 346 aa8.29□□□□□ -1.08
RTF1-206ENST00000560447 TAS2R3Q9NYW6 316 aa8.29□□□□□ -1.08
RTF1-206ENST00000560447 BDP1A6H8Y1 2624 aa8.28□□□□□ -1.08
RTF1-206ENST00000560447 BORCS7-ASMTA0A0B4J1R7 106 aa8.28□□□□□ -1.08
RTF1-206ENST00000560447 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.28□□□□□ -1.08
RTF1-206ENST00000560447 C3orf85A0A1B0GTC6 90 aa8.28□□□□□ -1.08
RTF1-206ENST00000560447 GPR137BO60478 399 aa8.28□□□□□ -1.08
RTF1-206ENST00000560447 SLC25A6P12236 298 aa8.28□□□□□ -1.08
RTF1-206ENST00000560447 CCL2P13500 99 aa8.28□□□□□ -1.08
RTF1-206ENST00000560447 PRKACAP17612 351 aa8.28□□□□□ -1.08
RTF1-206ENST00000560447 IGHV1-2P23083 117 aa8.28□□□□□ -1.08
RTF1-206ENST00000560447 UCP1P25874 307 aa8.28□□□□□ -1.08
RTF1-206ENST00000560447 HOXC12P31275 282 aa8.28□□□□□ -1.08
RTF1-206ENST00000560447 SULT1A2P50226 295 aa8.28□□□□□ -1.08
RTF1-206ENST00000560447 FXYD4P59646 89 aa8.28□□□□□ -1.08
RTF1-206ENST00000560447 ERVK11-1P61568 191 aa8.28□□□□□ -1.08
RTF1-206ENST00000560447 HLA-DRB3P79483 266 aa8.28□□□□□ -1.08
RTF1-206ENST00000560447 MZT1Q08AG7 82 aa8.28□□□□□ -1.08
RTF1-206ENST00000560447 TMEM268Q5VZI3 342 aa8.28□□□□□ -1.08
RTF1-206ENST00000560447 HAGHLQ6PII5 290 aaPredicted RBP8.28□□□□□ -1.08
RTF1-206ENST00000560447 CMTM1Q8IZ96 169 aa8.28□□□□□ -1.08
RTF1-206ENST00000560447 SUMF2Q8NBJ7 301 aa8.28□□□□□ -1.08
RTF1-206ENST00000560447 RELL2Q8NC24 303 aaPredicted RBP8.28□□□□□ -1.08
RTF1-206ENST00000560447 GALNT11Q8NCW6 608 aa8.28□□□□□ -1.08
RTF1-206ENST00000560447 FDCSPQ8NFU4 85 aa8.28□□□□□ -1.08
RTF1-206ENST00000560447 LILRB1Q8NHL6 650 aaPredicted RBP8.28□□□□□ -1.08
RTF1-206ENST00000560447 MRPL30Q8TCC3 161 aaKnown RBP8.28□□□□□ -1.08
RTF1-206ENST00000560447 KIRREL1Q96J84 757 aa8.28□□□□□ -1.08
RTF1-206ENST00000560447 AKR1E2Q96JD6 320 aa8.28□□□□□ -1.08
RTF1-206ENST00000560447 SMIM8Q96KF7 97 aa8.28□□□□□ -1.08
RTF1-206ENST00000560447 LINC00052Q96N35 136 aa8.28□□□□□ -1.08
RTF1-206ENST00000560447 DMRTA2Q96SC8 542 aa8.28□□□□□ -1.08
RTF1-206ENST00000560447 MMP26Q9NRE1 261 aa8.28□□□□□ -1.08
RTF1-206ENST00000560447 GSKIPQ9P0R6 139 aa8.28□□□□□ -1.08
RTF1-206ENST00000560447 LPAR3Q9UBY5 353 aa8.28□□□□□ -1.08
RTF1-206ENST00000560447 CACNA1GO43497 2377 aa8.28□□□□□ -1.08
RTF1-206ENST00000560447 CNTRLQ7Z7A1 2325 aa8.28□□□□□ -1.08
RTF1-206ENST00000560447 MSGN1A6NI15 193 aa8.27□□□□□ -1.09
RTF1-206ENST00000560447 ZSCAN5BA6NJL1 495 aa8.27□□□□□ -1.09
RTF1-206ENST00000560447 MPTX1A8MV57 137 aa8.27□□□□□ -1.09
RTF1-206ENST00000560447 H0Y980 276 aa8.27□□□□□ -1.09
RTF1-206ENST00000560447 NKX2-8O15522 239 aa8.27□□□□□ -1.09
RTF1-206ENST00000560447 IGKV3-15P01624 115 aa8.27□□□□□ -1.09
RTF1-206ENST00000560447 HOXD4P09016 255 aaPredicted RBP8.27□□□□□ -1.09
RTF1-206ENST00000560447 PGA5P0DJD9 388 aa8.27□□□□□ -1.09
RTF1-206ENST00000560447 PVALBP20472 110 aaPredicted RBP8.27□□□□□ -1.09
RTF1-206ENST00000560447 GNRHRP30968 328 aa8.27□□□□□ -1.09
RTF1-206ENST00000560447 RAB5CP51148 216 aa8.27□□□□□ -1.09
RTF1-206ENST00000560447 CCL11P51671 97 aa8.27□□□□□ -1.09
RTF1-206ENST00000560447 RTP5Q14D33 572 aa8.27□□□□□ -1.09
RTF1-206ENST00000560447 ZNF146Q15072 292 aa8.27□□□□□ -1.09
RTF1-206ENST00000560447 P2RY6Q15077 328 aa8.27□□□□□ -1.09
RTF1-206ENST00000560447 MSMO1Q15800 293 aa8.27□□□□□ -1.09
RTF1-206ENST00000560447 C3orf36Q3SXR2 165 aa8.27□□□□□ -1.09
RTF1-206ENST00000560447 FAM209AQ5JX71 171 aa8.27□□□□□ -1.09
RTF1-206ENST00000560447 ATP1A1-AS1Q5TC04 95 aa8.27□□□□□ -1.09
RTF1-206ENST00000560447 Q6P435 159 aa8.27□□□□□ -1.09
RTF1-206ENST00000560447 IGFL3Q6UXB1 125 aa8.27□□□□□ -1.09
RTF1-206ENST00000560447 Q6ZPA2 131 aa8.27□□□□□ -1.09
RTF1-206ENST00000560447 TMPRSS7Q7RTY8 843 aa8.27□□□□□ -1.09
RTF1-206ENST00000560447 COMMD1Q8N668 190 aa8.27□□□□□ -1.09
RTF1-206ENST00000560447 OR5T2Q8NGG2 359 aa8.27□□□□□ -1.09
RTF1-206ENST00000560447 OR4D5Q8NGN0 318 aa8.27□□□□□ -1.09
RTF1-206ENST00000560447 NEK7Q8TDX7 302 aa8.27□□□□□ -1.09
RTF1-206ENST00000560447 FAM216AQ8WUB2 273 aa8.27□□□□□ -1.09
RTF1-206ENST00000560447 DYRK2Q92630 601 aa8.27□□□□□ -1.09
RTF1-206ENST00000560447 CYYR1Q96J86 154 aa8.27□□□□□ -1.09
RTF1-206ENST00000560447 BCL2L14Q9BZR8 327 aa8.27□□□□□ -1.09
RTF1-206ENST00000560447 SEBOXQ9HB31 216 aaPredicted RBP8.27□□□□□ -1.09
RTF1-206ENST00000560447 TAF9BQ9HBM6 251 aa8.27□□□□□ -1.09
RTF1-206ENST00000560447 ZC4H2Q9NQZ6 224 aa8.27□□□□□ -1.09
RTF1-206ENST00000560447 PARP11Q9NR21 331 aa8.27□□□□□ -1.09
RTF1-206ENST00000560447 PLSCR4Q9NRQ2 329 aa8.27□□□□□ -1.09
RTF1-206ENST00000560447 ZNF581Q9P0T4 197 aa8.27□□□□□ -1.09
RTF1-206ENST00000560447 AMDHD2Q9Y303 409 aa8.27□□□□□ -1.09
RTF1-206ENST00000560447 TRAV24A0A0B4J272 114 aa8.26□□□□□ -1.09
RTF1-206ENST00000560447 A0A1B0GWJ7 208 aa8.26□□□□□ -1.09
RTF1-206ENST00000560447 FAM221AA4D161 298 aa8.26□□□□□ -1.09
RTF1-206ENST00000560447 PHF1O43189 567 aaPredicted RBP8.26□□□□□ -1.09
RTF1-206ENST00000560447 SYNGR1O43759 233 aa8.26□□□□□ -1.09
RTF1-206ENST00000560447 MBPP02686 304 aaPredicted RBP8.26□□□□□ -1.09
RTF1-206ENST00000560447 SEC11BP0C7V7 166 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms