RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 TMEM30CPA0ZSE6 113 aa8.33□□□□□ -1.08
USP3-216ENST00000559873 M0R1W7 72 aa8.33□□□□□ -1.08
USP3-216ENST00000559873 CLEC2LP0C7M8 214 aa8.33□□□□□ -1.08
USP3-216ENST00000559873 SLC2A2P11168 524 aaPredicted RBP8.33□□□□□ -1.08
USP3-216ENST00000559873 SOX6P35712 828 aa8.33□□□□□ -1.08
USP3-216ENST00000559873 RPS19P39019 145 aaKnown RBP8.33□□□□□ -1.08
USP3-216ENST00000559873 MRPS15P82914 257 aaKnown RBP8.33□□□□□ -1.08
USP3-216ENST00000559873 QRFPP83859 136 aa8.33□□□□□ -1.08
USP3-216ENST00000559873 PAX5Q02548 391 aa8.33□□□□□ -1.08
USP3-216ENST00000559873 CR1LQ2VPA4 569 aa8.33□□□□□ -1.08
USP3-216ENST00000559873 OR10K2Q6IF99 312 aa8.33□□□□□ -1.08
USP3-216ENST00000559873 NR2C2APQ86WQ0 139 aa8.33□□□□□ -1.08
USP3-216ENST00000559873 LY6G5BQ8NDX9 201 aa8.33□□□□□ -1.08
USP3-216ENST00000559873 LGALS14Q8TCE9 139 aa8.33□□□□□ -1.08
USP3-216ENST00000559873 ACOT12Q8WYK0 555 aa8.33□□□□□ -1.08
USP3-216ENST00000559873 DACT3Q96B18 629 aaPredicted RBP8.33□□□□□ -1.08
USP3-216ENST00000559873 NAA50Q9GZZ1 169 aaKnown RBP8.33□□□□□ -1.08
USP3-216ENST00000559873 LPAR5Q9H1C0 372 aa8.33□□□□□ -1.08
USP3-216ENST00000559873 GAL3ST2Q9H3Q3 398 aa8.33□□□□□ -1.08
USP3-216ENST00000559873 KCNK15Q9H427 330 aa8.33□□□□□ -1.08
USP3-216ENST00000559873 RAB9BQ9NP90 201 aa8.33□□□□□ -1.08
USP3-216ENST00000559873 MMP26Q9NRE1 261 aa8.33□□□□□ -1.08
USP3-216ENST00000559873 OR6C3Q9NZP0 311 aa8.33□□□□□ -1.08
USP3-216ENST00000559873 ONECUT1Q9UBC0 465 aa8.33□□□□□ -1.08
USP3-216ENST00000559873 CDC42EP3Q9UKI2 254 aa8.33□□□□□ -1.08
USP3-216ENST00000559873 PEX16Q9Y5Y5 336 aa8.33□□□□□ -1.08
USP3-216ENST00000559873 LINC00312Q9Y6C7 94 aa8.33□□□□□ -1.08
USP3-216ENST00000559873 NSD1Q96L73 2696 aaPredicted RBP8.33□□□□□ -1.08
USP3-216ENST00000559873 ZANQ9Y493 2812 aa8.32□□□□□ -1.08
USP3-216ENST00000559873 NAV3Q8IVL0 2385 aa8.32□□□□□ -1.08
USP3-216ENST00000559873 MEIKINA0A087WXM9 373 aa8.32□□□□□ -1.08
USP3-216ENST00000559873 SMIM31A0A1B0GVY4 71 aa8.32□□□□□ -1.08
USP3-216ENST00000559873 ODAMA1E959 279 aa8.32□□□□□ -1.08
USP3-216ENST00000559873 LDLRAD4O15165 306 aa8.32□□□□□ -1.08
USP3-216ENST00000559873 RBP4P02753 201 aa8.32□□□□□ -1.08
USP3-216ENST00000559873 BLVRBP30043 206 aaPredicted RBP8.32□□□□□ -1.08
USP3-216ENST00000559873 TGFBR1P36897 503 aa8.32□□□□□ -1.08
USP3-216ENST00000559873 RORCP51449 518 aa8.32□□□□□ -1.08
USP3-216ENST00000559873 PAX2Q02962 417 aa8.32□□□□□ -1.08
USP3-216ENST00000559873 PAX8Q06710 450 aa8.32□□□□□ -1.08
USP3-216ENST00000559873 DYNC1I2Q13409 638 aaKnown RBP8.32□□□□□ -1.08
USP3-216ENST00000559873 PDCD1Q15116 288 aa8.32□□□□□ -1.08
USP3-216ENST00000559873 FGFRL1Q8N441 504 aa8.32□□□□□ -1.08
USP3-216ENST00000559873 ZNF565Q8N9K5 539 aa8.32□□□□□ -1.08
USP3-216ENST00000559873 ISOC1Q96CN7 298 aa8.32□□□□□ -1.08
USP3-216ENST00000559873 ZNF714Q96N38 554 aa8.32□□□□□ -1.08
USP3-216ENST00000559873 ATG5Q9H1Y0 275 aa8.32□□□□□ -1.08
USP3-216ENST00000559873 NCOR1P1Q9H4R4 102 aa8.32□□□□□ -1.08
USP3-216ENST00000559873 GSX1Q9H4S2 264 aaPredicted RBP8.32□□□□□ -1.08
USP3-216ENST00000559873 C19orf12Q9NSK7 152 aa8.32□□□□□ -1.08
USP3-216ENST00000559873 PLEKHJ1Q9NW61 149 aa8.32□□□□□ -1.08
USP3-216ENST00000559873 RHBDL2Q9NX52 303 aa8.32□□□□□ -1.08
USP3-216ENST00000559873 ETAA1Q9NY74 926 aa8.32□□□□□ -1.08
USP3-216ENST00000559873 NDUFA13Q9P0J0 144 aa8.32□□□□□ -1.08
USP3-216ENST00000559873 RSL24D1Q9UHA3 163 aaKnown RBP8.32□□□□□ -1.08
USP3-216ENST00000559873 UBE2J1Q9Y385 318 aaPredicted RBP8.32□□□□□ -1.08
USP3-216ENST00000559873 A0A0A6YYH2 397 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 A0A0B4J203 849 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 A6NJ64 397 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 ZNF701M0R085 212 aaPredicted RBP8.31□□□□□ -1.08
USP3-216ENST00000559873 FCN3O75636 299 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 CLPXO76031 633 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 TOX4O94842 621 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 ZNF728P0DKX0 622 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 SNRPBP14678 240 aaKnown RBP8.31□□□□□ -1.08
USP3-216ENST00000559873 CHATP28329 748 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 SRP14P37108 136 aaKnown RBP8.31□□□□□ -1.08
USP3-216ENST00000559873 GLP1RP43220 463 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 VEGFCP49767 419 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 GUCA2AQ02747 115 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 AESQ08117 197 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 CHRFAM7AQ494W8 412 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 UBE2NLQ5JXB2 153 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 FAM120AOSQ5T036 256 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 C6orf183Q5T699 404 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 NCR3LG1Q68D85 454 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 SLC35E4Q6ICL7 350 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 MZT2AQ6P582 158 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 TRAT1Q6PIZ9 186 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 C1orf122Q6ZSJ8 110 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 MOB1BQ7L9L4 216 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 BPIFB2Q8N4F0 458 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 FAM89BQ8N5H3 189 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 TPRX1Q8N7U7 411 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 OR4M1Q8NGD0 313 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 NDNFQ8TB73 568 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 NANPQ8TBE9 248 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 UPRTQ96BW1 309 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 RAB3CQ96E17 227 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 COQ2Q96H96 371 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 WDFY2Q96P53 400 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 NICN1Q9BSH3 213 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 BEX2Q9BXY8 128 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 TMPRSS13Q9BYE2 586 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 RIMS4Q9H426 269 aaPredicted RBP8.31□□□□□ -1.08
USP3-216ENST00000559873 METTL8Q9H825 291 aaKnown RBP8.31□□□□□ -1.08
USP3-216ENST00000559873 ING3Q9NXR8 418 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 TAS2R3Q9NYW6 316 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 KIF25Q9UIL4 384 aa8.31□□□□□ -1.08
USP3-216ENST00000559873 HSF4Q9ULV5 492 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms