RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 TCF23Q7RTU1 214 aa12.24□□□□□ -0.45
SNRPA1-207ENST00000559309 SULT4A1Q9BR01 284 aa12.24□□□□□ -0.45
SNRPA1-207ENST00000559309 SSBP3Q9BWW4 388 aaPredicted RBP12.24□□□□□ -0.45
SNRPA1-207ENST00000559309 PCDHB10Q9UN67 800 aa12.24□□□□□ -0.45
SNRPA1-207ENST00000559309 TRBV23-1A0A0A0MS06 115 aa12.23□□□□□ -0.45
SNRPA1-207ENST00000559309 TRBV6-6A0A0A6YYG2 114 aa12.23□□□□□ -0.45
SNRPA1-207ENST00000559309 METTL21EPA6NDL7 271 aa12.23□□□□□ -0.45
SNRPA1-207ENST00000559309 POM121CA8CG34 1229 aa12.23□□□□□ -0.45
SNRPA1-207ENST00000559309 CTDSP2O14595 271 aa12.23□□□□□ -0.45
SNRPA1-207ENST00000559309 CA11O75493 328 aa12.23□□□□□ -0.45
SNRPA1-207ENST00000559309 TPPPO94811 219 aa12.23□□□□□ -0.45
SNRPA1-207ENST00000559309 NAPSAO96009 420 aa12.23□□□□□ -0.45
SNRPA1-207ENST00000559309 EIF4EP06730 217 aaKnown RBP12.23□□□□□ -0.45
SNRPA1-207ENST00000559309 MELTFP08582 738 aa12.23□□□□□ -0.45
SNRPA1-207ENST00000559309 FOSL1P15407 271 aa12.23□□□□□ -0.45
SNRPA1-207ENST00000559309 BLVRBP30043 206 aaPredicted RBP12.23□□□□□ -0.45
SNRPA1-207ENST00000559309 ZNF260Q3ZCT1 412 aa12.23□□□□□ -0.45
SNRPA1-207ENST00000559309 ESCO2Q56NI9 601 aa12.23□□□□□ -0.45
SNRPA1-207ENST00000559309 SLC35E4Q6ICL7 350 aa12.23□□□□□ -0.45
SNRPA1-207ENST00000559309 ZNF497Q6ZNH5 498 aa12.23□□□□□ -0.45
SNRPA1-207ENST00000559309 C6orf201Q7Z4U5 140 aa12.23□□□□□ -0.45
SNRPA1-207ENST00000559309 SAMD12Q8N8I0 201 aa12.23□□□□□ -0.45
SNRPA1-207ENST00000559309 CORO2AQ92828 525 aa12.23□□□□□ -0.45
SNRPA1-207ENST00000559309 MSI2Q96DH6 328 aaKnown RBP12.23□□□□□ -0.45
SNRPA1-207ENST00000559309 ARHGAP5-AS1Q96IT6 56 aa12.23□□□□□ -0.45
SNRPA1-207ENST00000559309 WDFY2Q96P53 400 aa12.23□□□□□ -0.45
SNRPA1-207ENST00000559309 PECRQ9BY49 303 aa12.23□□□□□ -0.45
SNRPA1-207ENST00000559309 PPA2Q9H2U2 334 aa12.23□□□□□ -0.45
SNRPA1-207ENST00000559309 MMP27Q9H306 513 aa12.23□□□□□ -0.45
SNRPA1-207ENST00000559309 COMMD3Q9UBI1 195 aa12.23□□□□□ -0.45
SNRPA1-207ENST00000559309 RPUSD1Q9UJJ7 312 aaKnown RBP12.23□□□□□ -0.45
SNRPA1-207ENST00000559309 ARHGAP32A7KAX9 2087 aa12.23□□□□□ -0.45
SNRPA1-207ENST00000559309 B4DSR2 109 aa12.22□□□□□ -0.45
SNRPA1-207ENST00000559309 PHF1O43189 567 aaPredicted RBP12.22□□□□□ -0.45
SNRPA1-207ENST00000559309 XRCC3O43542 346 aa12.22□□□□□ -0.45
SNRPA1-207ENST00000559309 HPGDSO60760 199 aa12.22□□□□□ -0.45
SNRPA1-207ENST00000559309 FOXH1O75593 365 aa12.22□□□□□ -0.45
SNRPA1-207ENST00000559309 HEXAP06865 529 aa12.22□□□□□ -0.45
SNRPA1-207ENST00000559309 HIST1H1DP16402 221 aaKnown RBP12.22□□□□□ -0.45
SNRPA1-207ENST00000559309 ELK1P19419 428 aa12.22□□□□□ -0.45
SNRPA1-207ENST00000559309 GZMKP49863 264 aa12.22□□□□□ -0.45
SNRPA1-207ENST00000559309 DLX6P56179 175 aa12.22□□□□□ -0.45
SNRPA1-207ENST00000559309 P2RX3P56373 397 aa12.22□□□□□ -0.45
SNRPA1-207ENST00000559309 GNB2P62879 340 aa12.22□□□□□ -0.45
SNRPA1-207ENST00000559309 MEF2CQ06413 473 aaPredicted RBP12.22□□□□□ -0.45
SNRPA1-207ENST00000559309 RBM39Q14498 530 aaKnown RBP12.22□□□□□ -0.45
SNRPA1-207ENST00000559309 GRK1Q15835 563 aa12.22□□□□□ -0.45
SNRPA1-207ENST00000559309 PAN3Q58A45 887 aaKnown RBP12.22□□□□□ -0.45
SNRPA1-207ENST00000559309 CD276Q5ZPR3 534 aa12.22□□□□□ -0.45
SNRPA1-207ENST00000559309 MZT2AQ6P582 158 aa12.22□□□□□ -0.45
SNRPA1-207ENST00000559309 ZNF880Q6PDB4 577 aa12.22□□□□□ -0.45
SNRPA1-207ENST00000559309 BTN2A1Q7KYR7 527 aa12.22□□□□□ -0.45
SNRPA1-207ENST00000559309 BPIFB2Q8N4F0 458 aa12.22□□□□□ -0.45
SNRPA1-207ENST00000559309 C11orf42Q8N5U0 333 aa12.22□□□□□ -0.45
SNRPA1-207ENST00000559309 ASCC1Q8N9N2 400 aaKnown RBP12.22□□□□□ -0.45
SNRPA1-207ENST00000559309 LINC01356Q8N9X3 169 aa12.22□□□□□ -0.45
SNRPA1-207ENST00000559309 MAPK1IP1LQ8NDC0 245 aa12.22□□□□□ -0.45
SNRPA1-207ENST00000559309 TMEM185AQ8NFB2 350 aa12.22□□□□□ -0.45
SNRPA1-207ENST00000559309 PPP1R35Q8TAP8 253 aa12.22□□□□□ -0.45
SNRPA1-207ENST00000559309 SOSTQ9BQB4 213 aa12.22□□□□□ -0.45
SNRPA1-207ENST00000559309 DCUN1D5Q9BTE7 237 aa12.22□□□□□ -0.45
SNRPA1-207ENST00000559309 CHST6Q9GZX3 395 aa12.22□□□□□ -0.45
SNRPA1-207ENST00000559309 LINC00574Q9H8X3 128 aa12.22□□□□□ -0.45
SNRPA1-207ENST00000559309 C19orf12Q9NSK7 152 aa12.22□□□□□ -0.45
SNRPA1-207ENST00000559309 PEX16Q9Y5Y5 336 aa12.22□□□□□ -0.45
SNRPA1-207ENST00000559309 IGHV2-70DA0A0C4DH43 119 aa12.21□□□□□ -0.45
SNRPA1-207ENST00000559309 KIR2DS1A0A191URI9 304 aa12.21□□□□□ -0.45
SNRPA1-207ENST00000559309 MT-ND4P03905 459 aa12.21□□□□□ -0.45
SNRPA1-207ENST00000559309 MSMBP08118 114 aa12.21□□□□□ -0.45
SNRPA1-207ENST00000559309 CDK2P24941 298 aa12.21□□□□□ -0.45
SNRPA1-207ENST00000559309 SCN1BQ07699 218 aa12.21□□□□□ -0.45
SNRPA1-207ENST00000559309 CNPY1Q3B7I2 92 aa12.21□□□□□ -0.45
SNRPA1-207ENST00000559309 BRICD5Q6PL45 260 aa12.21□□□□□ -0.45
SNRPA1-207ENST00000559309 Q6ZTK2 550 aa12.21□□□□□ -0.45
SNRPA1-207ENST00000559309 DYRK2Q92630 601 aa12.21□□□□□ -0.45
SNRPA1-207ENST00000559309 RAB3CQ96E17 227 aa12.21□□□□□ -0.45
SNRPA1-207ENST00000559309 C18orf12Q96KH6 178 aa12.21□□□□□ -0.45
SNRPA1-207ENST00000559309 NEDD4LQ96PU5 975 aa12.21□□□□□ -0.45
SNRPA1-207ENST00000559309 FAAP24Q9BTP7 215 aa12.21□□□□□ -0.45
SNRPA1-207ENST00000559309 ATG5Q9H1Y0 275 aa12.21□□□□□ -0.45
SNRPA1-207ENST00000559309 MMP26Q9NRE1 261 aa12.21□□□□□ -0.45
SNRPA1-207ENST00000559309 MBNL3Q9NUK0 354 aaKnown RBP12.21□□□□□ -0.45
SNRPA1-207ENST00000559309 LOC105371242A0A075B767 164 aa12.2□□□□□ -0.46
SNRPA1-207ENST00000559309 TRAV20A0A0B4J274 112 aa12.2□□□□□ -0.46
SNRPA1-207ENST00000559309 ODAMA1E959 279 aa12.2□□□□□ -0.46
SNRPA1-207ENST00000559309 SERPINE3A8MV23 424 aa12.2□□□□□ -0.46
SNRPA1-207ENST00000559309 MCRIP1C9JLW8 97 aa12.2□□□□□ -0.46
SNRPA1-207ENST00000559309 HLA-DQB1P01920 261 aa12.2□□□□□ -0.46
SNRPA1-207ENST00000559309 GSTP1P09211 210 aaKnown RBP12.2□□□□□ -0.46
SNRPA1-207ENST00000559309 GLIPR1P48060 266 aa12.2□□□□□ -0.46
SNRPA1-207ENST00000559309 DVL1P1P54792 670 aaPredicted RBP12.2□□□□□ -0.46
SNRPA1-207ENST00000559309 PAX8Q06710 450 aa12.2□□□□□ -0.46
SNRPA1-207ENST00000559309 AESQ08117 197 aa12.2□□□□□ -0.46
SNRPA1-207ENST00000559309 ATXN7L3Q14CW9 347 aaPredicted RBP12.2□□□□□ -0.46
SNRPA1-207ENST00000559309 ARL6IP1Q15041 203 aa12.2□□□□□ -0.46
SNRPA1-207ENST00000559309 ATAD3CQ5T2N8 411 aa12.2□□□□□ -0.46
SNRPA1-207ENST00000559309 OLFML2AQ68BL7 652 aa12.2□□□□□ -0.46
SNRPA1-207ENST00000559309 TMEM200BQ69YZ2 307 aa12.2□□□□□ -0.46
SNRPA1-207ENST00000559309 LINC00299Q6ZSB3 139 aa12.2□□□□□ -0.46
SNRPA1-207ENST00000559309 C1orf122Q6ZSJ8 110 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms