RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 IRF3Q14653 427 aa6.24□□□□□ -1.41
HNRNPC-226ENST00000556628 HERPUD1Q15011 391 aa6.24□□□□□ -1.41
HNRNPC-226ENST00000556628 FAM189A2Q15884 450 aa6.24□□□□□ -1.41
HNRNPC-226ENST00000556628 PLA1AQ53H76 456 aa6.24□□□□□ -1.41
HNRNPC-226ENST00000556628 FBLN7Q53RD9 439 aa6.24□□□□□ -1.41
HNRNPC-226ENST00000556628 SPIN3Q5JUX0 258 aa6.24□□□□□ -1.41
HNRNPC-226ENST00000556628 ZNF367Q7RTV3 350 aa6.24□□□□□ -1.41
HNRNPC-226ENST00000556628 ANKRD13BQ86YJ7 626 aa6.24□□□□□ -1.41
HNRNPC-226ENST00000556628 C11orf42Q8N5U0 333 aa6.24□□□□□ -1.41
HNRNPC-226ENST00000556628 BVESQ8NE79 360 aa6.24□□□□□ -1.41
HNRNPC-226ENST00000556628 OR13C9Q8NGT0 318 aa6.24□□□□□ -1.41
HNRNPC-226ENST00000556628 NDNFQ8TB73 568 aa6.24□□□□□ -1.41
HNRNPC-226ENST00000556628 C17orf50Q8WW18 174 aa6.24□□□□□ -1.41
HNRNPC-226ENST00000556628 MALSU1Q96EH3 234 aa6.24□□□□□ -1.41
HNRNPC-226ENST00000556628 ADAT3Q96EY9 351 aaPredicted RBP6.24□□□□□ -1.41
HNRNPC-226ENST00000556628 RCC1LQ96I51 464 aaKnown RBP6.24□□□□□ -1.41
HNRNPC-226ENST00000556628 C4orf36Q96KX1 117 aa6.24□□□□□ -1.41
HNRNPC-226ENST00000556628 OPALINQ96PE5 141 aa6.24□□□□□ -1.41
HNRNPC-226ENST00000556628 MND1Q9BWT6 205 aa6.24□□□□□ -1.41
HNRNPC-226ENST00000556628 KRTAP4-2Q9BYR5 136 aa6.24□□□□□ -1.41
HNRNPC-226ENST00000556628 COMMD4Q9H0A8 199 aa6.24□□□□□ -1.41
HNRNPC-226ENST00000556628 EXOSC4Q9NPD3 245 aaKnown RBP6.24□□□□□ -1.41
HNRNPC-226ENST00000556628 CHCHD3Q9NX63 227 aaKnown RBP6.24□□□□□ -1.41
HNRNPC-226ENST00000556628 PRR13Q9NZ81 148 aa6.24□□□□□ -1.41
HNRNPC-226ENST00000556628 DIMT1Q9UNQ2 313 aaKnown RBP6.24□□□□□ -1.41
HNRNPC-226ENST00000556628 ERGIC3Q9Y282 383 aa6.24□□□□□ -1.41
HNRNPC-226ENST00000556628 EXOGQ9Y2C4 368 aaKnown RBP6.24□□□□□ -1.41
HNRNPC-226ENST00000556628 GSTK1Q9Y2Q3 226 aa6.24□□□□□ -1.41
HNRNPC-226ENST00000556628 LINC00312Q9Y6C7 94 aa6.24□□□□□ -1.41
HNRNPC-226ENST00000556628 TET2Q6N021 2002 aaPredicted RBP6.24□□□□□ -1.41
HNRNPC-226ENST00000556628 NBEAL1Q6ZS30 2694 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 TRGV10A0A0A0MS01 117 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 IGKV1-9A0A0C4DH69 117 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 MEX3AA1L020 520 aaKnown RBP6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 F8VVB4 439 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 F8VWA3 439 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 H3BMQ9 156 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 SIRPB1O00241 398 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 MYL12BO14950 172 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 MAGEB3O15480 346 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 KCNAB3O43448 404 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 ZNF737O75373 536 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 PEX14O75381 377 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 HCKP08631 526 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 CSF1P09603 554 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 ZNF44P15621 663 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 BCL3P20749 454 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 PAX6P26367 422 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 PSMB9P28065 219 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 DUSP1P28562 367 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 NPBWR2P48146 333 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 GBX2P52951 348 aaPredicted RBP6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 NANOS3P60323 173 aaKnown RBP6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 SCN1BQ07699 218 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 PDZK1IP1Q13113 114 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 ZNF146Q15072 292 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 ZNF124Q15973 351 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 SSX2Q16385 188 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 LCE4AQ5TA78 99 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 MINOS1Q5TGZ0 78 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 ZNF626Q68DY1 528 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 OR52W1Q6IF63 320 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 LHFPL4Q7Z7J7 247 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 LHFPL3Q86UP9 236 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 SERPINA12Q8IW75 414 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 TPRX1Q8N7U7 411 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 OR11H6Q8NGC7 330 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 OR5D14Q8NGL3 314 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 FAM110DQ8TAY7 271 aaPredicted RBP6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 HAVCR2Q8TDQ0 301 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 RFT1Q96AA3 541 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 LGALS12Q96DT0 336 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 YIPF6Q96EC8 236 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 PELI1Q96FA3 418 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 MISP3Q96FF7 219 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 CPNE2Q96FN4 548 aaPredicted RBP6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 ALG8Q9BVK2 526 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 FUNDC2Q9BWH2 189 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 CHST6Q9GZX3 395 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 GAL3ST2Q9H3Q3 398 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 ZCCHC4Q9H5U6 513 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 RHOFQ9HBH0 211 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 HMG20AQ9NP66 347 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 FGF20Q9NP95 211 aaPredicted RBP6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 INPP5EQ9NRR6 644 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 RBFOX1Q9NWB1 397 aaKnown RBP6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 DHDHQ9UQ10 334 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 UBE2J1Q9Y385 318 aaPredicted RBP6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 EXOSC1Q9Y3B2 195 aaKnown RBP6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 SESN1Q9Y6P5 492 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 MINOS1-NBL1R4GNA1 71 aa6.23□□□□□ -1.41
HNRNPC-226ENST00000556628 DSCAML1Q8TD84 2053 aa6.22□□□□□ -1.41
HNRNPC-226ENST00000556628 TMEM82A0PJX8 343 aa6.22□□□□□ -1.41
HNRNPC-226ENST00000556628 FAM90A8PA6NJQ4 464 aa6.22□□□□□ -1.41
HNRNPC-226ENST00000556628 TMEM212A6NML5 194 aa6.22□□□□□ -1.41
HNRNPC-226ENST00000556628 VGLL3A8MV65 326 aa6.22□□□□□ -1.41
HNRNPC-226ENST00000556628 ODF3BA8MYP8 253 aa6.22□□□□□ -1.41
HNRNPC-226ENST00000556628 J3QRE1 110 aa6.22□□□□□ -1.41
HNRNPC-226ENST00000556628 F2RL2O00254 374 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms