RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 OR5A2Q8NGI9 324 aa5.31□□□□□ -1.56
ATXN3-236ENST00000556220 CNIH3Q8TBE1 160 aa5.31□□□□□ -1.56
ATXN3-236ENST00000556220 C4orf3Q8WVX3 66 aa5.31□□□□□ -1.56
ATXN3-236ENST00000556220 PGAM5Q96HS1 289 aa5.31□□□□□ -1.56
ATXN3-236ENST00000556220 ZNF488Q96MN9 340 aa5.31□□□□□ -1.56
ATXN3-236ENST00000556220 NRIP2Q9BQI9 281 aa5.31□□□□□ -1.56
ATXN3-236ENST00000556220 OR14J1Q9UGF5 321 aa5.31□□□□□ -1.56
ATXN3-236ENST00000556220 SAMHD1Q9Y3Z3 626 aaKnown RBP5.31□□□□□ -1.56
ATXN3-236ENST00000556220 HERC1Q15751 4861 aa5.31□□□□□ -1.56
ATXN3-236ENST00000556220 FAT2Q9NYQ8 4349 aa5.31□□□□□ -1.56
ATXN3-236ENST00000556220 DNAH17Q9UFH2 4485 aa5.31□□□□□ -1.56
ATXN3-236ENST00000556220 A0A1W2PRQ8 180 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 hADV38S2A0JD32 116 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 ARRDC5A6NEK1 342 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 LINC01548A6NM66 108 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 DIRC3C9JPN6 131 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 G3V2T6 193 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 LY6LH3BQJ8 138 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 TNFRSF11BO00300 401 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 SLC16A6O15403 523 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 FGF16O43320 207 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 NOS1APO75052 506 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-236ENST00000556220 ZNF737O75373 536 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 MMP23AO75900 390 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 SOX14O95416 240 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 SPARCP09486 303 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 HSD11B1P28845 292 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 SLC6A6P31641 620 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 CAPGP40121 348 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 MNDAP41218 407 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 EDDM3BP56851 147 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.3□□□□□ -1.56
ATXN3-236ENST00000556220 GPR50Q13585 617 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 DGCR6Q14129 220 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 HAGHQ16775 308 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 MICAQ29983 383 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 CEACAM21Q3KPI0 293 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 CEP78Q5JTW2 689 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 ZNF691Q5VV52 312 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 C12orf73Q69YU5 71 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 CCDC144NLQ6NUI1 221 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 GDPD3Q7L5L3 318 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 SLC35E3Q7Z769 313 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 FOXRED2Q8IWF2 684 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 ENTHD1Q8IYW4 607 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 PACRGLQ8N7B6 248 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 C5orf56Q8N8D9 126 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 AQP11Q8NBQ7 271 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 PROKR2Q8NFJ6 384 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 OR51L1Q8NGJ5 315 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 ZNF596Q8TC21 504 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 ST6GALNAC6Q969X2 333 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 EME1Q96AY2 570 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 CREB3L1Q96BA8 519 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 IFT27Q9BW83 186 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 RBM38Q9H0Z9 239 aaKnown RBP5.3□□□□□ -1.56
ATXN3-236ENST00000556220 OR52D1Q9H346 318 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 EGLN3Q9H6Z9 239 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 ISYNA1Q9NPH2 558 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 FKBP14Q9NWM8 211 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 SMPD3Q9NY59 655 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-236ENST00000556220 DNAJC27Q9NZQ0 273 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 SLC22A13Q9Y226 551 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 COMMD3-BMI1R4GMX3 469 aa5.3□□□□□ -1.56
ATXN3-236ENST00000556220 MUC4Q99102 2169 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 DPPA5A6NC42 116 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 OR5B21A6NL26 309 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 OOSP1A8MZH6 123 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 PRR32B1ATL7 298 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 BUB1B-PAK6H3BSN5 160 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 AP4M1O00189 453 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 SAP30O75446 220 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 NXPH2O95156 264 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 IGLV1-47P01700 117 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 H1F0P07305 194 aaKnown RBP5.29□□□□□ -1.56
ATXN3-236ENST00000556220 OR8U8P0C7N1 319 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 FCGR1AP12314 374 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 FMO3P31513 532 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 CEACAM3P40198 252 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 ALDH3B2P48448 385 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 POU3F4P49335 361 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 PTTG1IPP53801 180 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 ESRRGP62508 458 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 SRSF7Q16629 238 aaKnown RBP eCLIP5.29□□□□□ -1.56
ATXN3-236ENST00000556220 TPTE2P1Q5T6R2 138 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 XAF1Q6GPH4 301 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 BAIAP2L2Q6UXY1 529 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 LYPD6Q86Y78 171 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 SGPP2Q8IWX5 399 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 ASCC1Q8N9N2 400 aaKnown RBP5.29□□□□□ -1.56
ATXN3-236ENST00000556220 BBS1Q8NFJ9 593 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 OR6Q1Q8NGQ2 317 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 OR1N2Q8NGR9 330 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 OR2T4Q8NH00 348 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 FANK1Q8TC84 345 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 GIPC3Q8TF64 312 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 RNF133Q8WVZ7 376 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 NRBF2Q96F24 287 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 SNX22Q96L94 193 aa5.29□□□□□ -1.56
ATXN3-236ENST00000556220 CNBD2Q96M20 576 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms