RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 SLC16A12Q6ZSM3 486 aa9.54□□□□□ -0.88
VRK1-204ENST00000555351 OR10A7Q8NGE5 316 aa9.54□□□□□ -0.88
VRK1-204ENST00000555351 OR51A2Q8NGJ7 313 aa9.54□□□□□ -0.88
VRK1-204ENST00000555351 NDNFQ8TB73 568 aa9.54□□□□□ -0.88
VRK1-204ENST00000555351 GGHQ92820 318 aa9.54□□□□□ -0.88
VRK1-204ENST00000555351 GHSRQ92847 366 aa9.54□□□□□ -0.88
VRK1-204ENST00000555351 PRSS22Q9GZN4 317 aa9.54□□□□□ -0.88
VRK1-204ENST00000555351 VCXQ9H320 206 aa9.54□□□□□ -0.88
VRK1-204ENST00000555351 TAS2R4Q9NYW5 299 aa9.54□□□□□ -0.88
VRK1-204ENST00000555351 CKLFQ9UBR5 152 aa9.54□□□□□ -0.88
VRK1-204ENST00000555351 TRAV24A0A0B4J272 114 aa9.53□□□□□ -0.88
VRK1-204ENST00000555351 KBTBD11-OT1A0A1B0GTJ5 212 aa9.53□□□□□ -0.88
VRK1-204ENST00000555351 LEUTXA8MZ59 168 aa9.53□□□□□ -0.88
VRK1-204ENST00000555351 F2RL2O00254 374 aa9.53□□□□□ -0.88
VRK1-204ENST00000555351 MMP23AO75900 390 aa9.53□□□□□ -0.88
VRK1-204ENST00000555351 IGFBP3P17936 291 aaPredicted RBP9.53□□□□□ -0.88
VRK1-204ENST00000555351 C21orf33P30042 268 aaPredicted RBP9.53□□□□□ -0.88
VRK1-204ENST00000555351 BRS3P32247 399 aa9.53□□□□□ -0.88
VRK1-204ENST00000555351 ZNF93P35789 620 aaPredicted RBP9.53□□□□□ -0.88
VRK1-204ENST00000555351 PRRX1P54821 245 aa9.53□□□□□ -0.88
VRK1-204ENST00000555351 SLC34A1Q06495 639 aa9.53□□□□□ -0.88
VRK1-204ENST00000555351 SCN1BQ07699 218 aa9.53□□□□□ -0.88
VRK1-204ENST00000555351 RIPK1Q13546 671 aa9.53□□□□□ -0.88
VRK1-204ENST00000555351 GPR176Q14439 515 aa9.53□□□□□ -0.88
VRK1-204ENST00000555351 MPV17LQ2QL34 196 aa9.53□□□□□ -0.88
VRK1-204ENST00000555351 PAN3Q58A45 887 aaKnown RBP9.53□□□□□ -0.88
VRK1-204ENST00000555351 DDI2Q5TDH0 399 aa9.53□□□□□ -0.88
VRK1-204ENST00000555351 RNLSQ5VYX0 342 aa9.53□□□□□ -0.88
VRK1-204ENST00000555351 CCDC144NLQ6NUI1 221 aa9.53□□□□□ -0.88
VRK1-204ENST00000555351 CCBE1Q6UXH8 406 aaPredicted RBP9.53□□□□□ -0.88
VRK1-204ENST00000555351 SATL1Q86VE3 508 aa9.53□□□□□ -0.88
VRK1-204ENST00000555351 MRPS24Q96EL2 167 aaKnown RBP9.53□□□□□ -0.88
VRK1-204ENST00000555351 AKR1E2Q96JD6 320 aa9.53□□□□□ -0.88
VRK1-204ENST00000555351 METTL9Q9H1A3 318 aa9.53□□□□□ -0.88
VRK1-204ENST00000555351 DCLRE1BQ9H816 532 aa9.53□□□□□ -0.88
VRK1-204ENST00000555351 ZNF702PQ9H963 129 aa9.53□□□□□ -0.88
VRK1-204ENST00000555351 LIN7BQ9HAP6 207 aa9.53□□□□□ -0.88
VRK1-204ENST00000555351 CLEC2DQ9UHP7 191 aa9.53□□□□□ -0.88
VRK1-204ENST00000555351 PSORS1C1Q9UIG5 152 aa9.53□□□□□ -0.88
VRK1-204ENST00000555351 SIRT4Q9Y6E7 314 aaPredicted RBP9.53□□□□□ -0.88
VRK1-204ENST00000555351 TRBV5-7A0A0A0MS05 114 aa9.52□□□□□ -0.89
VRK1-204ENST00000555351 MEX3AA1L020 520 aaKnown RBP9.52□□□□□ -0.89
VRK1-204ENST00000555351 NPIPB11E5RHQ5 1161 aa9.52□□□□□ -0.89
VRK1-204ENST00000555351 TOR1AO14656 332 aa9.52□□□□□ -0.89
VRK1-204ENST00000555351 LALBAP00709 142 aa9.52□□□□□ -0.89
VRK1-204ENST00000555351 CSTBP04080 98 aaKnown RBP9.52□□□□□ -0.89
VRK1-204ENST00000555351 PAX6P26367 422 aa9.52□□□□□ -0.89
VRK1-204ENST00000555351 RAB13P51153 203 aa9.52□□□□□ -0.89
VRK1-204ENST00000555351 RBM11P57052 281 aaKnown RBP9.52□□□□□ -0.89
VRK1-204ENST00000555351 RPS11P62280 158 aaKnown RBP eCLIP9.52□□□□□ -0.89
VRK1-204ENST00000555351 ATXN7L3Q14CW9 347 aaPredicted RBP9.52□□□□□ -0.89
VRK1-204ENST00000555351 C17orf58Q2M2W7 97 aa9.52□□□□□ -0.89
VRK1-204ENST00000555351 HLA-DRB5Q30154 266 aa9.52□□□□□ -0.89
VRK1-204ENST00000555351 PRAMEF5Q5TYX0 476 aa9.52□□□□□ -0.89
VRK1-204ENST00000555351 OSR2Q8N2R0 312 aa9.52□□□□□ -0.89
VRK1-204ENST00000555351 OR9G1Q8NH87 305 aa9.52□□□□□ -0.89
VRK1-204ENST00000555351 PGLYRP3Q96LB9 341 aa9.52□□□□□ -0.89
VRK1-204ENST00000555351 S100A13Q99584 98 aa9.52□□□□□ -0.89
VRK1-204ENST00000555351 SERTAD4Q9NUC0 356 aa9.52□□□□□ -0.89
VRK1-204ENST00000555351 FKBP14Q9NWM8 211 aa9.52□□□□□ -0.89
VRK1-204ENST00000555351 FOXJ3Q9UPW0 622 aa9.52□□□□□ -0.89
VRK1-204ENST00000555351 ST3GAL6Q9Y274 331 aa9.52□□□□□ -0.89
VRK1-204ENST00000555351 HILPDAQ9Y5L2 63 aa9.52□□□□□ -0.89
VRK1-204ENST00000555351 TRRAPQ9Y4A5 3859 aa9.52□□□□□ -0.89
VRK1-204ENST00000555351 MEIKINA0A087WXM9 373 aa9.51□□□□□ -0.89
VRK1-204ENST00000555351 LY6LH3BQJ8 138 aa9.51□□□□□ -0.89
VRK1-204ENST00000555351 BUB1B-PAK6H3BSN5 160 aa9.51□□□□□ -0.89
VRK1-204ENST00000555351 HTR3BO95264 441 aa9.51□□□□□ -0.89
VRK1-204ENST00000555351 IL1AP01583 271 aa9.51□□□□□ -0.89
VRK1-204ENST00000555351 GNAO1P09471 354 aa9.51□□□□□ -0.89
VRK1-204ENST00000555351 CSF1P09603 554 aa9.51□□□□□ -0.89
VRK1-204ENST00000555351 GZMHP20718 246 aa9.51□□□□□ -0.89
VRK1-204ENST00000555351 MAPK3P27361 379 aaPredicted RBP9.51□□□□□ -0.89
VRK1-204ENST00000555351 OR3A4PP47883 348 aa9.51□□□□□ -0.89
VRK1-204ENST00000555351 WNT4P56705 351 aa9.51□□□□□ -0.89
VRK1-204ENST00000555351 RSBN1Q5VWQ0 802 aaPredicted RBP9.51□□□□□ -0.89
VRK1-204ENST00000555351 LAIR2Q6ISS4 152 aa9.51□□□□□ -0.89
VRK1-204ENST00000555351 KLHDC1Q8N7A1 406 aa9.51□□□□□ -0.89
VRK1-204ENST00000555351 WIPF2Q8TF74 440 aaPredicted RBP9.51□□□□□ -0.89
VRK1-204ENST00000555351 TFAP2CQ92754 450 aa9.51□□□□□ -0.89
VRK1-204ENST00000555351 KIRREL1Q96J84 757 aa9.51□□□□□ -0.89
VRK1-204ENST00000555351 ZNF184Q99676 751 aaPredicted RBP9.51□□□□□ -0.89
VRK1-204ENST00000555351 WNT10AQ9GZT5 417 aa9.51□□□□□ -0.89
VRK1-204ENST00000555351 FAM192AQ9GZU8 254 aa9.51□□□□□ -0.89
VRK1-204ENST00000555351 PPIL3Q9H2H8 161 aaKnown RBP9.51□□□□□ -0.89
VRK1-204ENST00000555351 ZNF286AQ9HBT8 521 aa9.51□□□□□ -0.89
VRK1-204ENST00000555351 SPACA1Q9HBV2 294 aa9.51□□□□□ -0.89
VRK1-204ENST00000555351 CALYQ9NYX4 217 aa9.51□□□□□ -0.89
VRK1-204ENST00000555351 KIF25Q9UIL4 384 aa9.51□□□□□ -0.89
VRK1-204ENST00000555351 SIGLEC9Q9Y336 463 aa9.51□□□□□ -0.89
VRK1-204ENST00000555351 AMMECR1Q9Y4X0 333 aaPredicted RBP9.51□□□□□ -0.89
VRK1-204ENST00000555351 VWFP04275 2813 aa9.5□□□□□ -0.89
VRK1-204ENST00000555351 TET2Q6N021 2002 aaPredicted RBP9.5□□□□□ -0.89
VRK1-204ENST00000555351 FAM90A10PA6NDY2 464 aa9.5□□□□□ -0.89
VRK1-204ENST00000555351 FAM90A18PA6NE21 464 aa9.5□□□□□ -0.89
VRK1-204ENST00000555351 FAM90A16PA6NEW6 464 aa9.5□□□□□ -0.89
VRK1-204ENST00000555351 FAM90A20PA6NIJ5 464 aa9.5□□□□□ -0.89
VRK1-204ENST00000555351 FAM90A7PA6NKC0 464 aa9.5□□□□□ -0.89
VRK1-204ENST00000555351 FAM90A12PA8MX19 464 aa9.5□□□□□ -0.89
VRK1-204ENST00000555351 FAM90A5PA8MXJ8 464 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms