RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 OR13C3Q8NGS6 347 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 OR51F2Q8NH61 342 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 ZNF671Q8TAW3 534 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 TSEN15Q8WW01 171 aaKnown RBP3.88□□□□□ -1.79
ATXN3-220ENST00000553491 H1FXQ92522 213 aaKnown RBP3.88□□□□□ -1.79
ATXN3-220ENST00000553491 RORBQ92753 470 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 FGGYQ96C11 551 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 TMEM80Q96HE8 168 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 TECTBQ96PL2 329 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 OR8B2Q96RD0 313 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 TMEM246Q9BRR3 403 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 CCDC90BQ9GZT6 254 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 COMMD4Q9H0A8 199 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 VCX3BQ9H321 246 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 RGCCQ9H4X1 137 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 OPA3Q9H6K4 179 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 ISG20L2Q9H9L3 353 aaKnown RBP3.88□□□□□ -1.79
ATXN3-220ENST00000553491 TMEM165Q9HC07 324 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 NEK6Q9HC98 313 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 C8orf4Q9NR00 106 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 ACOXLQ9NUZ1 547 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 FAM206AQ9NX38 181 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 SCN3BQ9NY72 215 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 ERVK-18Q9QC07 812 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 MIOXQ9UGB7 285 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 ENPP5Q9UJA9 477 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 EXOGQ9Y2C4 368 aaKnown RBP3.88□□□□□ -1.79
ATXN3-220ENST00000553491 LRRC42Q9Y546 428 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 MPC1Q9Y5U8 109 aa3.88□□□□□ -1.79
ATXN3-220ENST00000553491 SETD2Q9BYW2 2564 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-220ENST00000553491 IGHV3OR16-10A0A075B7F0 116 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 TRAV38-1A0A0B4J264 116 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 A0A0U1RQV5 110 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 IRGMA1A4Y4 181 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 ANKRD61A6NGH8 418 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 NDUFB3O43676 98 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 XPNPEP2O43895 674 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 CRLF1O75462 422 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 WBP4O75554 376 aaKnown RBP3.87□□□□□ -1.79
ATXN3-220ENST00000553491 FOXH1O75593 365 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 DHRS3O75911 302 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 CYB5AP00167 134 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 CST4P01036 141 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 IGHV2-70P01814 119 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 IGHV2-5P01817 119 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 TFF1P04155 84 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 MSMBP08118 114 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 HCKP08631 526 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 GNAO1P09471 354 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 WNT2P09544 360 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 CALCBP10092 127 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 ADRA2CP18825 462 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 GLRA1P23415 457 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 EEF1B2P24534 225 aaKnown RBP3.87□□□□□ -1.79
ATXN3-220ENST00000553491 CD200P41217 278 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 KIR3DL2P43630 455 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 HAAOP46952 286 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 ETV1P50549 477 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 ATP1B3P54709 279 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 AQP4P55087 323 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 SNU13P55769 128 aaKnown RBP3.87□□□□□ -1.79
ATXN3-220ENST00000553491 MTCP1P56278 107 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 ISL1P61371 349 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 SEC61A1P61619 476 aaKnown RBP3.87□□□□□ -1.79
ATXN3-220ENST00000553491 ACTA2P62736 377 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 GNG3P63215 75 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 ACTG2P63267 376 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 ADARB1P78563 741 aaKnown RBP3.87□□□□□ -1.79
ATXN3-220ENST00000553491 ST3GAL4Q11206 333 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 RAB40BQ12829 278 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 KCNJ8Q15842 424 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 MICBQ29980 383 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 CEACAM21Q3KPI0 293 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 WDR38Q5JTN6 314 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 SLC25A30Q5SVS4 291 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 CLVS2Q5SYC1 327 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 OGFRL1Q5TC84 451 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-220ENST00000553491 OR2G6Q5TZ20 316 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 TMEM244Q5VVB8 128 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 HAGHLQ6PII5 290 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-220ENST00000553491 AHSA2Q719I0 299 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 TMEM219Q86XT9 240 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 EGFL6Q8IUX8 553 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 PRSS35Q8N3Z0 413 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 ZFP41Q8N8Y5 198 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 Q8NFD4 153 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 OR5A2Q8NGI9 324 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 OR2G2Q8NGZ5 317 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 OR5AK2Q8NH90 309 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 APH1BQ8WW43 257 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 OR5P3Q8WZ94 311 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 GGHQ92820 318 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 RFT1Q96AA3 541 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 TMEM186Q96B77 213 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 TMIGD2Q96BF3 282 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 SEH1LQ96EE3 360 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 ZNF479Q96JC4 524 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 CNBD2Q96M20 576 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 ZNF488Q96MN9 340 aa3.87□□□□□ -1.79
ATXN3-220ENST00000553491 RDH12Q96NR8 316 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms