RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 FLYWCH2Q96CP2 140 aaKnown RBP1.65□□□□□ -2.15
PTCH1-223ENST00000551623 ZNF799Q96GE5 643 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 KCTD7Q96MP8 289 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 ZNF714Q96N38 554 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 GPX7Q96SL4 187 aaPredicted RBP1.65□□□□□ -2.15
PTCH1-223ENST00000551623 NEURL2Q9BR09 285 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 RNF126Q9BV68 326 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 TMED9Q9BVK6 235 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 RTL8AQ9BWD3 113 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 GGTLC1Q9BX51 225 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 FGF23Q9GZV9 251 aaPredicted RBP1.65□□□□□ -2.15
PTCH1-223ENST00000551623 OR51I2Q9H344 312 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 RGCCQ9H4X1 137 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 NMNAT1Q9HAN9 279 aaPredicted RBP1.65□□□□□ -2.15
PTCH1-223ENST00000551623 SNTG1Q9NSN8 517 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 NINJ2Q9NZG7 142 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 GIMAP2Q9UG22 337 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 DCDC2Q9UHG0 476 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 LINC00527Q9UJ94 153 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 SNX24Q9Y343 169 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 PKD1P98161 4303 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 DNAH10Q8IVF4 4471 aa1.65□□□□□ -2.15
PTCH1-223ENST00000551623 APOBP04114 4563 aaKnown RBP1.64□□□□□ -2.15
PTCH1-223ENST00000551623 A0A087WW49 117 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 hADV38S2A0JD32 116 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 IZUMO1RA6ND01 250 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 ARRDC5A6NEK1 342 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 OR5B21A6NL26 309 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 RFPL4AA6NLU0 287 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 ANXA2P2A6NMY6 339 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 ANKRD30BLA7E2S9 258 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 ZNF850A8MQ14 1090 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 OR11H12B2RN74 326 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 RFPL4AL1F8VTS6 287 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 DCTN6O00399 190 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 DLGAP1O14490 977 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 RFXANKO14593 260 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 SLC22A2O15244 555 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 MAGEB3O15480 346 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 XRCC3O43542 346 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 TYROBPO43914 113 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 SOX15O60248 233 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 MPZL2O60487 215 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 KHDRBS3O75525 346 aaKnown RBP1.64□□□□□ -2.15
PTCH1-223ENST00000551623 MMP23AO75900 390 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 OR2A4O95047 310 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 CPSF4O95639 269 aaKnown RBP1.64□□□□□ -2.15
PTCH1-223ENST00000551623 HLA-DRB1P01911 266 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 TFF1P04155 84 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 HSPB1P04792 205 aaKnown RBP1.64□□□□□ -2.15
PTCH1-223ENST00000551623 IFNA4P05014 189 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 IL6P05231 212 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 CSN3P07498 182 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 CHRNGP07510 517 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 CD14P08571 375 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 ABHD2P08910 425 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 CD7P09564 240 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 CGB3P0DN86 165 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 CGB7P0DN87 165 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 CPA3P15088 417 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 TMEM11P17152 192 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 GPX2P18283 190 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 ZP3P21754 424 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 VDAC1P21796 283 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 GLRA1P23415 457 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 IL12AP29459 219 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 CRABP1P29762 137 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 AQP1P29972 269 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 PRDX2P32119 198 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 SOX6P35712 828 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 NPBWR2P48146 333 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 ZNF137PP52743 207 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 PLTPP55058 493 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 CD81P60033 236 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 PAX5Q02548 391 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 ZNF816Q0VGE8 651 aaPredicted RBP1.64□□□□□ -2.15
PTCH1-223ENST00000551623 DYNC1I2Q13409 638 aaKnown RBP1.64□□□□□ -2.15
PTCH1-223ENST00000551623 APOFQ13790 326 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 DUSP7Q16829 419 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 MOGAT2Q3SYC2 334 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 C9orf152Q5JTZ5 239 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 LRIF1Q5T3J3 769 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 PVRIGQ6DKI7 326 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 PYHIN1Q6K0P9 492 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 CD200R1LQ6Q8B3 271 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 ZNF621Q6ZSS3 439 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 KCTD8Q6ZWB6 473 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 CCDC80Q76M96 950 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 SLC16A9Q7RTY1 509 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 ODF3L1Q8IXM7 274 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 C4orf33Q8N1A6 199 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 DEFB125Q8N687 156 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 TCTEX1D1Q8N7M0 179 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 ZNF676Q8N7Q3 588 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 GPR32P1Q8NGA4 272 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 OR4D11Q8NGI4 311 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 OR6T1Q8NGN1 323 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 OR56B4Q8NH76 319 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 OR2AE1Q8NHA4 323 aa1.64□□□□□ -2.15
PTCH1-223ENST00000551623 RPL3LQ92901 407 aaKnown RBP1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms