RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 APH1BQ8WW43 257 aa11.41□□□□□ -0.58
TROAP-203ENST00000546735 RGP1Q92546 391 aaPredicted RBP11.41□□□□□ -0.58
TROAP-203ENST00000546735 KIRREL1Q96J84 757 aa11.41□□□□□ -0.58
TROAP-203ENST00000546735 AKR1E2Q96JD6 320 aa11.41□□□□□ -0.58
TROAP-203ENST00000546735 RBM14Q96PK6 669 aaKnown RBP11.41□□□□□ -0.58
TROAP-203ENST00000546735 ZNF581Q9P0T4 197 aa11.41□□□□□ -0.58
TROAP-203ENST00000546735 KIF25Q9UIL4 384 aa11.41□□□□□ -0.58
TROAP-203ENST00000546735 MEIKINA0A087WXM9 373 aa11.4□□□□□ -0.58
TROAP-203ENST00000546735 A0A087X0M5 115 aa11.4□□□□□ -0.58
TROAP-203ENST00000546735 TRAV39A0A0B4J263 110 aa11.4□□□□□ -0.58
TROAP-203ENST00000546735 TRAV24A0A0B4J272 114 aa11.4□□□□□ -0.58
TROAP-203ENST00000546735 KBTBD11-OT1A0A1B0GTJ5 212 aa11.4□□□□□ -0.58
TROAP-203ENST00000546735 LOC100130705A0A1B0GUX0 176 aa11.4□□□□□ -0.58
TROAP-203ENST00000546735 A0A1B0GX30 115 aa11.4□□□□□ -0.58
TROAP-203ENST00000546735 TCRBV4S1A1TA0A5B7 111 aa11.4□□□□□ -0.58
TROAP-203ENST00000546735 TMEM212A6NML5 194 aa11.4□□□□□ -0.58
TROAP-203ENST00000546735 PIN1P1O15428 100 aa11.4□□□□□ -0.58
TROAP-203ENST00000546735 CCDC159P0C7I6 412 aa11.4□□□□□ -0.58
TROAP-203ENST00000546735 CGB3P0DN86 165 aa11.4□□□□□ -0.58
TROAP-203ENST00000546735 CGB7P0DN87 165 aa11.4□□□□□ -0.58
TROAP-203ENST00000546735 CD33P20138 364 aa11.4□□□□□ -0.58
TROAP-203ENST00000546735 CEACAM3P40198 252 aa11.4□□□□□ -0.58
TROAP-203ENST00000546735 ARHGDIBP52566 201 aa11.4□□□□□ -0.58
TROAP-203ENST00000546735 GBX2P52951 348 aaPredicted RBP11.4□□□□□ -0.58
TROAP-203ENST00000546735 PRRX1P54821 245 aa11.4□□□□□ -0.58
TROAP-203ENST00000546735 PIGYQ3MUY2 71 aa11.4□□□□□ -0.58
TROAP-203ENST00000546735 PAN3Q58A45 887 aaKnown RBP11.4□□□□□ -0.58
TROAP-203ENST00000546735 FOXB2Q5VYV0 432 aa11.4□□□□□ -0.58
TROAP-203ENST00000546735 XAF1Q6GPH4 301 aa11.4□□□□□ -0.58
TROAP-203ENST00000546735 RFESDQ8TAC1 157 aa11.4□□□□□ -0.58
TROAP-203ENST00000546735 CNIH3Q8TBE1 160 aa11.4□□□□□ -0.58
TROAP-203ENST00000546735 PLPPR1Q8TBJ4 325 aa11.4□□□□□ -0.58
TROAP-203ENST00000546735 MYDGFQ969H8 173 aa11.4□□□□□ -0.58
TROAP-203ENST00000546735 Q96MT0 163 aa11.4□□□□□ -0.58
TROAP-203ENST00000546735 GPER1Q99527 375 aa11.4□□□□□ -0.58
TROAP-203ENST00000546735 C9orf16Q9BUW7 83 aa11.4□□□□□ -0.58
TROAP-203ENST00000546735 FAM192AQ9GZU8 254 aa11.4□□□□□ -0.58
TROAP-203ENST00000546735 NECAP2Q9NVZ3 263 aa11.4□□□□□ -0.58
TROAP-203ENST00000546735 TAS2R4Q9NYW5 299 aa11.4□□□□□ -0.58
TROAP-203ENST00000546735 CALYQ9NYX4 217 aa11.4□□□□□ -0.58
TROAP-203ENST00000546735 OR6C3Q9NZP0 311 aa11.4□□□□□ -0.58
TROAP-203ENST00000546735 MPZL2O60487 215 aa11.39□□□□□ -0.59
TROAP-203ENST00000546735 ALX3O95076 343 aa11.39□□□□□ -0.59
TROAP-203ENST00000546735 LIMS3P0CW19 117 aa11.39□□□□□ -0.59
TROAP-203ENST00000546735 LIMS4P0CW20 117 aa11.39□□□□□ -0.59
TROAP-203ENST00000546735 PF4V1P10720 104 aa11.39□□□□□ -0.59
TROAP-203ENST00000546735 RAB3AP20336 220 aa11.39□□□□□ -0.59
TROAP-203ENST00000546735 MNDAP41218 407 aa11.39□□□□□ -0.59
TROAP-203ENST00000546735 RAB40BQ12829 278 aa11.39□□□□□ -0.59
TROAP-203ENST00000546735 DIAPH2-AS1Q14236 149 aa11.39□□□□□ -0.59
TROAP-203ENST00000546735 SMN1Q16637 294 aaKnown RBP11.39□□□□□ -0.59
TROAP-203ENST00000546735 ELP2Q6IA86 826 aa11.39□□□□□ -0.59
TROAP-203ENST00000546735 REC114Q7Z4M0 266 aa11.39□□□□□ -0.59
TROAP-203ENST00000546735 OR51T1Q8NGJ9 327 aa11.39□□□□□ -0.59
TROAP-203ENST00000546735 OR9G1Q8NH87 305 aa11.39□□□□□ -0.59
TROAP-203ENST00000546735 MRGPRDQ8TDS7 321 aa11.39□□□□□ -0.59
TROAP-203ENST00000546735 ORAI1Q96D31 301 aa11.39□□□□□ -0.59
TROAP-203ENST00000546735 JAM3Q9BX67 310 aa11.39□□□□□ -0.59
TROAP-203ENST00000546735 INPP5EQ9NRR6 644 aa11.39□□□□□ -0.59
TROAP-203ENST00000546735 FAM118AQ9NWS6 357 aa11.39□□□□□ -0.59
TROAP-203ENST00000546735 IDI2-AS1Q9NZ38 188 aa11.39□□□□□ -0.59
TROAP-203ENST00000546735 KIAA2026Q5HYC2 2103 aa11.38□□□□□ -0.59
TROAP-203ENST00000546735 J3QR06 171 aa11.38□□□□□ -0.59
TROAP-203ENST00000546735 HTR3BO95264 441 aa11.38□□□□□ -0.59
TROAP-203ENST00000546735 SNRNP70P08621 437 aaKnown RBP11.38□□□□□ -0.59
TROAP-203ENST00000546735 RPSAP08865 295 aaKnown RBP11.38□□□□□ -0.59
TROAP-203ENST00000546735 GNG10P50151 68 aa11.38□□□□□ -0.59
TROAP-203ENST00000546735 MRPL28Q13084 256 aaKnown RBP11.38□□□□□ -0.59
TROAP-203ENST00000546735 KHDC1LQ5JSQ8 128 aa11.38□□□□□ -0.59
TROAP-203ENST00000546735 RSBN1Q5VWQ0 802 aaPredicted RBP11.38□□□□□ -0.59
TROAP-203ENST00000546735 ZNF529Q6P280 563 aa11.38□□□□□ -0.59
TROAP-203ENST00000546735 ZNF565Q8N9K5 539 aa11.38□□□□□ -0.59
TROAP-203ENST00000546735 WFDC9Q8NEX5 89 aa11.38□□□□□ -0.59
TROAP-203ENST00000546735 PXT1Q8NFP0 134 aa11.38□□□□□ -0.59
TROAP-203ENST00000546735 OR56B4Q8NH76 319 aa11.38□□□□□ -0.59
TROAP-203ENST00000546735 TOMM40LQ969M1 308 aa11.38□□□□□ -0.59
TROAP-203ENST00000546735 RPEQ96AT9 228 aa11.38□□□□□ -0.59
TROAP-203ENST00000546735 CREB3L1Q96BA8 519 aa11.38□□□□□ -0.59
TROAP-203ENST00000546735 MYCBPQ99417 103 aaPredicted RBP11.38□□□□□ -0.59
TROAP-203ENST00000546735 S100A14Q9HCY8 104 aa11.38□□□□□ -0.59
TROAP-203ENST00000546735 MRPS18AQ9NVS2 196 aaKnown RBP11.38□□□□□ -0.59
TROAP-203ENST00000546735 PSG11Q9UQ72 335 aa11.38□□□□□ -0.59
TROAP-203ENST00000546735 RPL36Q9Y3U8 105 aaKnown RBP11.38□□□□□ -0.59
TROAP-203ENST00000546735 TSSC4Q9Y5U2 329 aaPredicted RBP11.38□□□□□ -0.59
TROAP-203ENST00000546735 NOTCH3Q9UM47 2321 aa11.37□□□□□ -0.59
TROAP-203ENST00000546735 A0A1W2PPE3 182 aa11.37□□□□□ -0.59
TROAP-203ENST00000546735 FAM90A18PA6NE21 464 aa11.37□□□□□ -0.59
TROAP-203ENST00000546735 FAM90A16PA6NEW6 464 aa11.37□□□□□ -0.59
TROAP-203ENST00000546735 FAM90A20PA6NIJ5 464 aa11.37□□□□□ -0.59
TROAP-203ENST00000546735 FAM90A9PA6NNJ1 464 aa11.37□□□□□ -0.59
TROAP-203ENST00000546735 FAM90A12PA8MX19 464 aa11.37□□□□□ -0.59
TROAP-203ENST00000546735 FAM90A5PA8MXJ8 464 aa11.37□□□□□ -0.59
TROAP-203ENST00000546735 OOSP1A8MZH6 123 aa11.37□□□□□ -0.59
TROAP-203ENST00000546735 MAGEB3O15480 346 aa11.37□□□□□ -0.59
TROAP-203ENST00000546735 CDRT1O95170 752 aa11.37□□□□□ -0.59
TROAP-203ENST00000546735 IL1AP01583 271 aa11.37□□□□□ -0.59
TROAP-203ENST00000546735 PF4P02776 101 aa11.37□□□□□ -0.59
TROAP-203ENST00000546735 FAM90A15PP0C7V4 464 aa11.37□□□□□ -0.59
TROAP-203ENST00000546735 FAM90A13PP0C7W8 464 aa11.37□□□□□ -0.59
TROAP-203ENST00000546735 FAM90A14PP0C7W9 464 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms