RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 LDLRAD4O15165 306 aa16.83■□□□□ 0.28
HMGA2-211ENST00000545998 CLEC2LP0C7M8 214 aa16.83■□□□□ 0.28
HMGA2-211ENST00000545998 SRD5A1P18405 259 aa16.83■□□□□ 0.28
HMGA2-211ENST00000545998 KCNJ3P48549 501 aa16.83■□□□□ 0.28
HMGA2-211ENST00000545998 LSM3P62310 102 aaKnown RBP16.83■□□□□ 0.28
HMGA2-211ENST00000545998 PAX5Q02548 391 aa16.83■□□□□ 0.28
HMGA2-211ENST00000545998 MXD1Q05195 221 aa16.83■□□□□ 0.28
HMGA2-211ENST00000545998 SIGIRRQ6IA17 410 aa16.83■□□□□ 0.28
HMGA2-211ENST00000545998 TCF23Q7RTU1 214 aa16.83■□□□□ 0.28
HMGA2-211ENST00000545998 SPACA1Q9HBV2 294 aa16.83■□□□□ 0.28
HMGA2-211ENST00000545998 hADV38S2A0JD32 116 aa16.82■□□□□ 0.28
HMGA2-211ENST00000545998 FUOMA2VDF0 154 aa16.82■□□□□ 0.28
HMGA2-211ENST00000545998 SLC2A2P11168 524 aaPredicted RBP16.82■□□□□ 0.28
HMGA2-211ENST00000545998 GLIPR1P48060 266 aa16.82■□□□□ 0.28
HMGA2-211ENST00000545998 KRBOX4Q5JUW0 171 aa16.82■□□□□ 0.28
HMGA2-211ENST00000545998 ATAD3CQ5T2N8 411 aa16.82■□□□□ 0.28
HMGA2-211ENST00000545998 BRICD5Q6PL45 260 aa16.82■□□□□ 0.28
HMGA2-211ENST00000545998 SLC16A12Q6ZSM3 486 aa16.82■□□□□ 0.28
HMGA2-211ENST00000545998 ANKRD13BQ86YJ7 626 aa16.82■□□□□ 0.28
HMGA2-211ENST00000545998 LPAR5Q9H1C0 372 aa16.82■□□□□ 0.28
HMGA2-211ENST00000545998 LIN7BQ9HAP6 207 aa16.82■□□□□ 0.28
HMGA2-211ENST00000545998 LINC00312Q9Y6C7 94 aa16.82■□□□□ 0.28
HMGA2-211ENST00000545998 A0A0B4J203 849 aa16.81■□□□□ 0.28
HMGA2-211ENST00000545998 TMEM272A0A1B0GTI8 110 aa16.81■□□□□ 0.28
HMGA2-211ENST00000545998 A0A1W2PPH5 198 aa16.81■□□□□ 0.28
HMGA2-211ENST00000545998 FAM157CP0CG43 387 aa16.81■□□□□ 0.28
HMGA2-211ENST00000545998 CCL3L1P16619 93 aa16.81■□□□□ 0.28
HMGA2-211ENST00000545998 DLX6P56179 175 aa16.81■□□□□ 0.28
HMGA2-211ENST00000545998 SFXN4Q6P4A7 337 aa16.81■□□□□ 0.28
HMGA2-211ENST00000545998 VMO1Q7Z5L0 202 aa16.81■□□□□ 0.28
HMGA2-211ENST00000545998 GPR141Q7Z602 305 aa16.81■□□□□ 0.28
HMGA2-211ENST00000545998 PLPPR1Q8TBJ4 325 aa16.81■□□□□ 0.28
HMGA2-211ENST00000545998 NICN1Q9BSH3 213 aa16.81■□□□□ 0.28
HMGA2-211ENST00000545998 A0A0A6YYD4 124 aa16.81■□□□□ 0.28
HMGA2-211ENST00000545998 ODAMA1E959 279 aa16.81■□□□□ 0.28
HMGA2-211ENST00000545998 MEX3AA1L020 520 aaKnown RBP16.81■□□□□ 0.28
HMGA2-211ENST00000545998 IGHV4-38-2P0DP08 117 aa16.81■□□□□ 0.28
HMGA2-211ENST00000545998 FUT3P21217 361 aa16.81■□□□□ 0.28
HMGA2-211ENST00000545998 PLA2G7Q13093 441 aa16.81■□□□□ 0.28
HMGA2-211ENST00000545998 RSBN1Q5VWQ0 802 aaPredicted RBP16.81■□□□□ 0.28
HMGA2-211ENST00000545998 RAB12Q6IQ22 244 aa16.81■□□□□ 0.28
HMGA2-211ENST00000545998 C11orf42Q8N5U0 333 aa16.81■□□□□ 0.28
HMGA2-211ENST00000545998 BARHL1Q9BZE3 327 aa16.81■□□□□ 0.28
HMGA2-211ENST00000545998 NAA50Q9GZZ1 169 aaKnown RBP16.81■□□□□ 0.28
HMGA2-211ENST00000545998 NCOR1P1Q9H4R4 102 aa16.81■□□□□ 0.28
HMGA2-211ENST00000545998 UNKLQ9H9P5 680 aaKnown RBP16.81■□□□□ 0.28
HMGA2-211ENST00000545998 ING3Q9NXR8 418 aa16.81■□□□□ 0.28
HMGA2-211ENST00000545998 DAPK2Q9UIK4 370 aa16.81■□□□□ 0.28
HMGA2-211ENST00000545998 H3BUI4 141 aa16.8■□□□□ 0.28
HMGA2-211ENST00000545998 PDCD6O75340 191 aa16.8■□□□□ 0.28
HMGA2-211ENST00000545998 ZNF728P0DKX0 622 aa16.8■□□□□ 0.28
HMGA2-211ENST00000545998 HOXB4P17483 251 aaPredicted RBP16.8■□□□□ 0.28
HMGA2-211ENST00000545998 BLMHQ13867 455 aa16.8■□□□□ 0.28
HMGA2-211ENST00000545998 GPR107Q5VW38 600 aa16.8■□□□□ 0.28
HMGA2-211ENST00000545998 FAM89BQ8N5H3 189 aa16.8■□□□□ 0.28
HMGA2-211ENST00000545998 CORO2AQ92828 525 aa16.8■□□□□ 0.28
HMGA2-211ENST00000545998 URM1Q9BTM9 101 aaKnown RBP16.8■□□□□ 0.28
HMGA2-211ENST00000545998 METTL8Q9H825 291 aaKnown RBP16.8■□□□□ 0.28
HMGA2-211ENST00000545998 SIRT7Q9NRC8 400 aa16.8■□□□□ 0.28
HMGA2-211ENST00000545998 RAB22AQ9UL26 194 aa16.8■□□□□ 0.28
HMGA2-211ENST00000545998 PEX16Q9Y5Y5 336 aa16.8■□□□□ 0.28
HMGA2-211ENST00000545998 TRAV40A0A0B4J280 105 aa16.79■□□□□ 0.28
HMGA2-211ENST00000545998 GABARAPO95166 117 aa16.79■□□□□ 0.28
HMGA2-211ENST00000545998 GLAP06280 429 aa16.79■□□□□ 0.28
HMGA2-211ENST00000545998 PRTN3P24158 256 aa16.79■□□□□ 0.28
HMGA2-211ENST00000545998 RPL5P46777 297 aaKnown RBP16.79■□□□□ 0.28
HMGA2-211ENST00000545998 VBP1P61758 197 aa16.79■□□□□ 0.28
HMGA2-211ENST00000545998 NCS1P62166 190 aa16.79■□□□□ 0.28
HMGA2-211ENST00000545998 TNFRSF14Q92956 283 aa16.79■□□□□ 0.28
HMGA2-211ENST00000545998 CYYR1Q96J86 154 aa16.79■□□□□ 0.28
HMGA2-211ENST00000545998 ZNF714Q96N38 554 aa16.79■□□□□ 0.28
HMGA2-211ENST00000545998 SCOCQ9UIL1 159 aa16.79■□□□□ 0.28
HMGA2-211ENST00000545998 KIF25Q9UIL4 384 aa16.79■□□□□ 0.28
HMGA2-211ENST00000545998 NUP50Q9UKX7 468 aa16.79■□□□□ 0.28
HMGA2-211ENST00000545998 UBE2J1Q9Y385 318 aaPredicted RBP16.79■□□□□ 0.28
HMGA2-211ENST00000545998 TRGV10A0A0A0MS01 117 aa16.78■□□□□ 0.28
HMGA2-211ENST00000545998 CENPVL3A0A0U1RRI6 287 aa16.78■□□□□ 0.28
HMGA2-211ENST00000545998 C17orf98A8MV24 154 aa16.78■□□□□ 0.28
HMGA2-211ENST00000545998 MCRIP1C9JLW8 97 aa16.78■□□□□ 0.28
HMGA2-211ENST00000545998 CHATP28329 748 aa16.78■□□□□ 0.28
HMGA2-211ENST00000545998 RPS19P39019 145 aaKnown RBP16.78■□□□□ 0.28
HMGA2-211ENST00000545998 EFNB2P52799 333 aa16.78■□□□□ 0.28
HMGA2-211ENST00000545998 DLX1P56177 255 aa16.78■□□□□ 0.28
HMGA2-211ENST00000545998 ERVFRD-1P60508 538 aa16.78■□□□□ 0.28
HMGA2-211ENST00000545998 RBM39Q14498 530 aaKnown RBP16.78■□□□□ 0.28
HMGA2-211ENST00000545998 CTF1Q16619 201 aa16.78■□□□□ 0.28
HMGA2-211ENST00000545998 SLC35E4Q6ICL7 350 aa16.78■□□□□ 0.28
HMGA2-211ENST00000545998 LHX4Q969G2 390 aa16.78■□□□□ 0.28
HMGA2-211ENST00000545998 PTX4Q96A99 478 aa16.78■□□□□ 0.28
HMGA2-211ENST00000545998 IGHV3OR16-10A0A075B7F0 116 aa16.77■□□□□ 0.28
HMGA2-211ENST00000545998 MEIKINA0A087WXM9 373 aa16.77■□□□□ 0.28
HMGA2-211ENST00000545998 FOXI3A8MTJ6 420 aaPredicted RBP16.77■□□□□ 0.28
HMGA2-211ENST00000545998 IL1AP01583 271 aa16.77■□□□□ 0.28
HMGA2-211ENST00000545998 RBP4P02753 201 aa16.77■□□□□ 0.28
HMGA2-211ENST00000545998 RAB6AP20340 208 aa16.77■□□□□ 0.28
HMGA2-211ENST00000545998 EPHA1P21709 976 aa16.77■□□□□ 0.28
HMGA2-211ENST00000545998 GPR157Q5UAW9 335 aa16.77■□□□□ 0.28
HMGA2-211ENST00000545998 ZNF497Q6ZNH5 498 aa16.77■□□□□ 0.28
HMGA2-211ENST00000545998 TRAPPC6BQ86SZ2 158 aa16.77■□□□□ 0.28
HMGA2-211ENST00000545998 NEK7Q8TDX7 302 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 243.6 ms