RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 TPRA1Q86W33 373 aa12.38□□□□□ -0.43
CD9-210ENST00000543916 C11orf42Q8N5U0 333 aa12.38□□□□□ -0.43
CD9-210ENST00000543916 LHX4Q969G2 390 aa12.38□□□□□ -0.43
CD9-210ENST00000543916 FAM3DQ96BQ1 224 aa12.38□□□□□ -0.43
CD9-210ENST00000543916 POM121Q96HA1 1249 aa12.38□□□□□ -0.43
CD9-210ENST00000543916 NICN1Q9BSH3 213 aa12.38□□□□□ -0.43
CD9-210ENST00000543916 TMEM59Q9BXS4 323 aa12.38□□□□□ -0.43
CD9-210ENST00000543916 ZNF69Q9UC07 566 aa12.38□□□□□ -0.43
CD9-210ENST00000543916 NUP50Q9UKX7 468 aa12.38□□□□□ -0.43
CD9-210ENST00000543916 LINC00312Q9Y6C7 94 aa12.38□□□□□ -0.43
CD9-210ENST00000543916 A0A0A6YYD4 124 aa12.37□□□□□ -0.43
CD9-210ENST00000543916 A0A0B4J203 849 aa12.37□□□□□ -0.43
CD9-210ENST00000543916 CENPVL3A0A0U1RRI6 287 aa12.37□□□□□ -0.43
CD9-210ENST00000543916 hADV38S2A0JD32 116 aa12.37□□□□□ -0.43
CD9-210ENST00000543916 ODAMA1E959 279 aa12.37□□□□□ -0.43
CD9-210ENST00000543916 FAM90A10PA6NDY2 464 aa12.37□□□□□ -0.43
CD9-210ENST00000543916 FAM90A18PA6NE21 464 aa12.37□□□□□ -0.43
CD9-210ENST00000543916 FAM90A16PA6NEW6 464 aa12.37□□□□□ -0.43
CD9-210ENST00000543916 FAM90A20PA6NIJ5 464 aa12.37□□□□□ -0.43
CD9-210ENST00000543916 FAM90A8PA6NJQ4 464 aa12.37□□□□□ -0.43
CD9-210ENST00000543916 FAM90A7PA6NKC0 464 aa12.37□□□□□ -0.43
CD9-210ENST00000543916 FAM90A22PA8MWA6 464 aa12.37□□□□□ -0.43
CD9-210ENST00000543916 FAM90A12PA8MX19 464 aa12.37□□□□□ -0.43
CD9-210ENST00000543916 FAM90A5PA8MXJ8 464 aa12.37□□□□□ -0.43
CD9-210ENST00000543916 FAM90A23PA8MXZ1 464 aa12.37□□□□□ -0.43
CD9-210ENST00000543916 AIPO00170 330 aa12.37□□□□□ -0.43
CD9-210ENST00000543916 LDLRAD4O15165 306 aa12.37□□□□□ -0.43
CD9-210ENST00000543916 FAM90A15PP0C7V4 464 aa12.37□□□□□ -0.43
CD9-210ENST00000543916 FAM90A13PP0C7W8 464 aa12.37□□□□□ -0.43
CD9-210ENST00000543916 FAM90A14PP0C7W9 464 aa12.37□□□□□ -0.43
CD9-210ENST00000543916 FAM90A24PP0C7X0 464 aa12.37□□□□□ -0.43
CD9-210ENST00000543916 ALDH3B2P48448 385 aa12.37□□□□□ -0.43
CD9-210ENST00000543916 LSM3P62310 102 aaKnown RBP12.37□□□□□ -0.43
CD9-210ENST00000543916 C2orf76Q3KRA6 126 aa12.37□□□□□ -0.43
CD9-210ENST00000543916 RSBN1Q5VWQ0 802 aaPredicted RBP12.37□□□□□ -0.43
CD9-210ENST00000543916 RUSC1-AS1Q66K80 236 aa12.37□□□□□ -0.43
CD9-210ENST00000543916 BRD3OSQ6XYD6 125 aa12.37□□□□□ -0.43
CD9-210ENST00000543916 PRIMA1Q86XR5 153 aa12.37□□□□□ -0.43
CD9-210ENST00000543916 C22orf15Q8WYQ4 148 aa12.37□□□□□ -0.43
CD9-210ENST00000543916 TNFRSF14Q92956 283 aa12.37□□□□□ -0.43
CD9-210ENST00000543916 TM2D1Q9BX74 207 aa12.37□□□□□ -0.43
CD9-210ENST00000543916 LPAR5Q9H1C0 372 aa12.37□□□□□ -0.43
CD9-210ENST00000543916 UNKLQ9H9P5 680 aaKnown RBP12.37□□□□□ -0.43
CD9-210ENST00000543916 KIF25Q9UIL4 384 aa12.37□□□□□ -0.43
CD9-210ENST00000543916 SOX21Q9Y651 276 aaPredicted RBP12.37□□□□□ -0.43
CD9-210ENST00000543916 TMEM272A0A1B0GTI8 110 aa12.36□□□□□ -0.43
CD9-210ENST00000543916 A0A1W2PPH5 198 aa12.36□□□□□ -0.43
CD9-210ENST00000543916 FUOMA2VDF0 154 aa12.36□□□□□ -0.43
CD9-210ENST00000543916 NOTOA8MTQ0 251 aa12.36□□□□□ -0.43
CD9-210ENST00000543916 C17orf98A8MV24 154 aa12.36□□□□□ -0.43
CD9-210ENST00000543916 RNASEK-C17orf49H0YIS7 233 aa12.36□□□□□ -0.43
CD9-210ENST00000543916 ZNF728P0DKX0 622 aa12.36□□□□□ -0.43
CD9-210ENST00000543916 PRTN3P24158 256 aa12.36□□□□□ -0.43
CD9-210ENST00000543916 KCNJ3P48549 501 aa12.36□□□□□ -0.43
CD9-210ENST00000543916 RIPPLY3P57055 190 aa12.36□□□□□ -0.43
CD9-210ENST00000543916 PAX5Q02548 391 aa12.36□□□□□ -0.43
CD9-210ENST00000543916 BLMHQ13867 455 aa12.36□□□□□ -0.43
CD9-210ENST00000543916 GPR157Q5UAW9 335 aa12.36□□□□□ -0.43
CD9-210ENST00000543916 RAB12Q6IQ22 244 aa12.36□□□□□ -0.43
CD9-210ENST00000543916 HCP5Q6MZN7 132 aa12.36□□□□□ -0.43
CD9-210ENST00000543916 TRAPPC6BQ86SZ2 158 aa12.36□□□□□ -0.43
CD9-210ENST00000543916 RTN4RL2Q86UN3 420 aa12.36□□□□□ -0.43
CD9-210ENST00000543916 PDZD9Q8IXQ8 264 aa12.36□□□□□ -0.43
CD9-210ENST00000543916 BCL6BQ8N143 479 aaPredicted RBP12.36□□□□□ -0.43
CD9-210ENST00000543916 ZNF714Q96N38 554 aa12.36□□□□□ -0.43
CD9-210ENST00000543916 METTL8Q9H825 291 aaKnown RBP12.36□□□□□ -0.43
CD9-210ENST00000543916 LIN7BQ9HAP6 207 aa12.36□□□□□ -0.43
CD9-210ENST00000543916 SPACA1Q9HBV2 294 aa12.36□□□□□ -0.43
CD9-210ENST00000543916 FBLN5Q9UBX5 448 aa12.36□□□□□ -0.43
CD9-210ENST00000543916 PEX16Q9Y5Y5 336 aa12.36□□□□□ -0.43
CD9-210ENST00000543916 TRGV10A0A0A0MS01 117 aa12.35□□□□□ -0.43
CD9-210ENST00000543916 IGHV1-69DA0A0B4J2H0 117 aa12.35□□□□□ -0.43
CD9-210ENST00000543916 PDCD6O75340 191 aa12.35□□□□□ -0.43
CD9-210ENST00000543916 IGHV1-69P01742 117 aa12.35□□□□□ -0.43
CD9-210ENST00000543916 FUT3P21217 361 aa12.35□□□□□ -0.43
CD9-210ENST00000543916 CHATP28329 748 aa12.35□□□□□ -0.43
CD9-210ENST00000543916 EFNB2P52799 333 aa12.35□□□□□ -0.43
CD9-210ENST00000543916 SFXN4Q6P4A7 337 aa12.35□□□□□ -0.43
CD9-210ENST00000543916 ZNF782Q6ZMW2 699 aaPredicted RBP12.35□□□□□ -0.43
CD9-210ENST00000543916 SLC16A12Q6ZSM3 486 aa12.35□□□□□ -0.43
CD9-210ENST00000543916 NEK7Q8TDX7 302 aa12.35□□□□□ -0.43
CD9-210ENST00000543916 DYRK2Q92630 601 aa12.35□□□□□ -0.43
CD9-210ENST00000543916 CORO2AQ92828 525 aa12.35□□□□□ -0.43
CD9-210ENST00000543916 SLC6A7Q99884 636 aa12.35□□□□□ -0.43
CD9-210ENST00000543916 BARHL1Q9BZE3 327 aa12.35□□□□□ -0.43
CD9-210ENST00000543916 NAA50Q9GZZ1 169 aaKnown RBP12.35□□□□□ -0.43
CD9-210ENST00000543916 DAPK2Q9UIK4 370 aa12.35□□□□□ -0.43
CD9-210ENST00000543916 UBE2J1Q9Y385 318 aaPredicted RBP12.35□□□□□ -0.43
CD9-210ENST00000543916 MEIKINA0A087WXM9 373 aa12.34□□□□□ -0.43
CD9-210ENST00000543916 TRAV39A0A0B4J263 110 aa12.34□□□□□ -0.43
CD9-210ENST00000543916 UBE2QL1A1L167 161 aa12.34□□□□□ -0.43
CD9-210ENST00000543916 MCRIP1C9JLW8 97 aa12.34□□□□□ -0.43
CD9-210ENST00000543916 SOCS1O15524 211 aa12.34□□□□□ -0.43
CD9-210ENST00000543916 MMP23AO75900 390 aa12.34□□□□□ -0.43
CD9-210ENST00000543916 RBP4P02753 201 aa12.34□□□□□ -0.43
CD9-210ENST00000543916 NCS1P62166 190 aa12.34□□□□□ -0.43
CD9-210ENST00000543916 TUSC1Q2TAM9 212 aa12.34□□□□□ -0.43
CD9-210ENST00000543916 NKAPLQ5M9Q1 402 aa12.34□□□□□ -0.43
CD9-210ENST00000543916 SLC35E4Q6ICL7 350 aa12.34□□□□□ -0.43
CD9-210ENST00000543916 ZNF497Q6ZNH5 498 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms