RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 WNK2Q9Y3S1 2297 aa10.07□□□□□ -0.8
DDX55-210ENST00000543016 SMIM30A4D0T7 59 aa10.07□□□□□ -0.8
DDX55-210ENST00000543016 CCDC160A6NGH7 325 aa10.07□□□□□ -0.8
DDX55-210ENST00000543016 A8MV72 311 aaPredicted RBP10.07□□□□□ -0.8
DDX55-210ENST00000543016 C22orf46C9J442 243 aa10.07□□□□□ -0.8
DDX55-210ENST00000543016 H3BMQ9 156 aa10.07□□□□□ -0.8
DDX55-210ENST00000543016 FCN3O75636 299 aa10.07□□□□□ -0.8
DDX55-210ENST00000543016 TFF1P04155 84 aa10.07□□□□□ -0.8
DDX55-210ENST00000543016 BLVRBP30043 206 aaPredicted RBP10.07□□□□□ -0.8
DDX55-210ENST00000543016 TGFBR1P36897 503 aa10.07□□□□□ -0.8
DDX55-210ENST00000543016 PAX8Q06710 450 aa10.07□□□□□ -0.8
DDX55-210ENST00000543016 KRTAP1-1Q07627 177 aa10.07□□□□□ -0.8
DDX55-210ENST00000543016 SLC35E4Q6ICL7 350 aa10.07□□□□□ -0.8
DDX55-210ENST00000543016 CLEC9AQ6UXN8 241 aa10.07□□□□□ -0.8
DDX55-210ENST00000543016 ZNF565Q8N9K5 539 aa10.07□□□□□ -0.8
DDX55-210ENST00000543016 NDNFQ8TB73 568 aa10.07□□□□□ -0.8
DDX55-210ENST00000543016 LGALS14Q8TCE9 139 aa10.07□□□□□ -0.8
DDX55-210ENST00000543016 DGCR14Q96DF8 476 aaKnown RBP10.07□□□□□ -0.8
DDX55-210ENST00000543016 RBM38Q9H0Z9 239 aaKnown RBP10.07□□□□□ -0.8
DDX55-210ENST00000543016 PPA2Q9H2U2 334 aa10.07□□□□□ -0.8
DDX55-210ENST00000543016 LPAR2Q9HBW0 351 aa10.07□□□□□ -0.8
DDX55-210ENST00000543016 PLEKHJ1Q9NW61 149 aa10.07□□□□□ -0.8
DDX55-210ENST00000543016 OR6C3Q9NZP0 311 aa10.07□□□□□ -0.8
DDX55-210ENST00000543016 CCDC59Q9P031 241 aaKnown RBP10.07□□□□□ -0.8
DDX55-210ENST00000543016 UBE2J1Q9Y385 318 aaPredicted RBP10.07□□□□□ -0.8
DDX55-210ENST00000543016 KPTNQ9Y664 436 aa10.07□□□□□ -0.8
DDX55-210ENST00000543016 TLN2Q9Y4G6 2542 aa10.06□□□□□ -0.8
DDX55-210ENST00000543016 HIVEP2P31629 2446 aa10.06□□□□□ -0.8
DDX55-210ENST00000543016 A0A1W2PQ09 198 aa10.06□□□□□ -0.8
DDX55-210ENST00000543016 TMEM30CPA0ZSE6 113 aa10.06□□□□□ -0.8
DDX55-210ENST00000543016 M0R1W7 72 aa10.06□□□□□ -0.8
DDX55-210ENST00000543016 LY6G6DO95868 133 aa10.06□□□□□ -0.8
DDX55-210ENST00000543016 RBP4P02753 201 aa10.06□□□□□ -0.8
DDX55-210ENST00000543016 SNRPBP14678 240 aaKnown RBP10.06□□□□□ -0.8
DDX55-210ENST00000543016 ZNF16P17020 682 aaPredicted RBP10.06□□□□□ -0.8
DDX55-210ENST00000543016 CHATP28329 748 aa10.06□□□□□ -0.8
DDX55-210ENST00000543016 EDDM3BP56851 147 aa10.06□□□□□ -0.8
DDX55-210ENST00000543016 KRBOX4Q5JUW0 171 aa10.06□□□□□ -0.8
DDX55-210ENST00000543016 SIGIRRQ6IA17 410 aa10.06□□□□□ -0.8
DDX55-210ENST00000543016 Q6ZTK2 550 aa10.06□□□□□ -0.8
DDX55-210ENST00000543016 GAPTQ8N292 157 aa10.06□□□□□ -0.8
DDX55-210ENST00000543016 OR10R2Q8NGX6 335 aa10.06□□□□□ -0.8
DDX55-210ENST00000543016 NEK7Q8TDX7 302 aa10.06□□□□□ -0.8
DDX55-210ENST00000543016 CORO2AQ92828 525 aa10.06□□□□□ -0.8
DDX55-210ENST00000543016 PHF21AQ96BD5 680 aa10.06□□□□□ -0.8
DDX55-210ENST00000543016 CHST6Q9GZX3 395 aa10.06□□□□□ -0.8
DDX55-210ENST00000543016 ATG5Q9H1Y0 275 aa10.06□□□□□ -0.8
DDX55-210ENST00000543016 ABCG5Q9H222 651 aa10.06□□□□□ -0.8
DDX55-210ENST00000543016 RAB9BQ9NP90 201 aa10.06□□□□□ -0.8
DDX55-210ENST00000543016 MMP26Q9NRE1 261 aa10.06□□□□□ -0.8
DDX55-210ENST00000543016 RHBDL2Q9NX52 303 aa10.06□□□□□ -0.8
DDX55-210ENST00000543016 TAS2R3Q9NYW6 316 aa10.06□□□□□ -0.8
DDX55-210ENST00000543016 LINC00312Q9Y6C7 94 aa10.06□□□□□ -0.8
DDX55-210ENST00000543016 HIVEP1P15822 2718 aa10.06□□□□□ -0.8
DDX55-210ENST00000543016 AKAP9Q99996 3911 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 TRGV10A0A0A0MS01 117 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 A0A0B4J203 849 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 ODAMA1E959 279 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 FOXI3A8MTJ6 420 aaPredicted RBP10.05□□□□□ -0.8
DDX55-210ENST00000543016 SERPINE3A8MV23 424 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 RAB27BO00194 218 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 PAHP00439 452 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 GZMHP20718 246 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 HNF1AP20823 631 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 VEGFCP49767 419 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 AESQ08117 197 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 EDDM3AQ14507 147 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 SPCS2Q15005 226 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 PDCD1Q15116 288 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 CR1LQ2VPA4 569 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 UBE2NLQ5JXB2 153 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 NKAPLQ5M9Q1 402 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 METTL11BQ5VVY1 283 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 RSBN1Q5VWQ0 802 aaPredicted RBP10.05□□□□□ -0.8
DDX55-210ENST00000543016 TMEM200BQ69YZ2 307 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 FAHD2BQ6P2I3 314 aaPredicted RBP10.05□□□□□ -0.8
DDX55-210ENST00000543016 TRAT1Q6PIZ9 186 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 ZNF554Q86TJ5 538 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 FAM185AQ8N0U4 392 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 DYNC2LI1Q8TCX1 351 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 RAB3CQ96E17 227 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 S100A16Q96FQ6 103 aaKnown RBP10.05□□□□□ -0.8
DDX55-210ENST00000543016 FAHD2AQ96GK7 314 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 NICN1Q9BSH3 213 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 KCNK15Q9H427 330 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 C7orf69Q9H7B7 122 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 UNKLQ9H9P5 680 aaKnown RBP10.05□□□□□ -0.8
DDX55-210ENST00000543016 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.05□□□□□ -0.8
DDX55-210ENST00000543016 DIABLOQ9NR28 239 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 BATF3Q9NR55 127 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 YAE1D1Q9NRH1 226 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 ETAA1Q9NY74 926 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 PLA2G2EQ9NZK7 142 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 OPN4Q9UHM6 478 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 AUP1Q9Y679 476 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 ABCA2Q9BZC7 2435 aa10.05□□□□□ -0.8
DDX55-210ENST00000543016 MEIKINA0A087WXM9 373 aa10.04□□□□□ -0.8
DDX55-210ENST00000543016 A0A0A6YYD4 124 aa10.04□□□□□ -0.8
DDX55-210ENST00000543016 HSPB6O14558 160 aa10.04□□□□□ -0.8
DDX55-210ENST00000543016 SOCS1O15524 211 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms