RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 SFXN4Q6P4A7 337 aa14.07□□□□□ -0.16
RABGGTA-203ENST00000543002 BPIFB2Q8N4F0 458 aa14.07□□□□□ -0.16
RABGGTA-203ENST00000543002 Q8N7P7 452 aa14.07□□□□□ -0.16
RABGGTA-203ENST00000543002 COQ2Q96H96 371 aa14.07□□□□□ -0.16
RABGGTA-203ENST00000543002 TBX15Q96SF7 602 aa14.07□□□□□ -0.16
RABGGTA-203ENST00000543002 PCGF1Q9BSM1 259 aa14.07□□□□□ -0.16
RABGGTA-203ENST00000543002 URM1Q9BTM9 101 aaKnown RBP14.07□□□□□ -0.16
RABGGTA-203ENST00000543002 BARHL1Q9BZE3 327 aa14.07□□□□□ -0.16
RABGGTA-203ENST00000543002 LPAR5Q9H1C0 372 aa14.07□□□□□ -0.16
RABGGTA-203ENST00000543002 LIN7BQ9HAP6 207 aa14.07□□□□□ -0.16
RABGGTA-203ENST00000543002 LINC00312Q9Y6C7 94 aa14.07□□□□□ -0.16
RABGGTA-203ENST00000543002 TMEM272A0A1B0GTI8 110 aa14.06□□□□□ -0.16
RABGGTA-203ENST00000543002 GLAP06280 429 aa14.06□□□□□ -0.16
RABGGTA-203ENST00000543002 SRD5A1P18405 259 aa14.06□□□□□ -0.16
RABGGTA-203ENST00000543002 FUT3P21217 361 aa14.06□□□□□ -0.16
RABGGTA-203ENST00000543002 RPL5P46777 297 aaKnown RBP14.06□□□□□ -0.16
RABGGTA-203ENST00000543002 KLF17Q5JT82 389 aaPredicted RBP14.06□□□□□ -0.16
RABGGTA-203ENST00000543002 KRBOX4Q5JUW0 171 aa14.06□□□□□ -0.16
RABGGTA-203ENST00000543002 GPR107Q5VW38 600 aa14.06□□□□□ -0.16
RABGGTA-203ENST00000543002 RAB12Q6IQ22 244 aa14.06□□□□□ -0.16
RABGGTA-203ENST00000543002 SLC16A12Q6ZSM3 486 aa14.06□□□□□ -0.16
RABGGTA-203ENST00000543002 TCF23Q7RTU1 214 aa14.06□□□□□ -0.16
RABGGTA-203ENST00000543002 PLPPR1Q8TBJ4 325 aa14.06□□□□□ -0.16
RABGGTA-203ENST00000543002 NCOR1P1Q9H4R4 102 aa14.06□□□□□ -0.16
RABGGTA-203ENST00000543002 DAPK2Q9UIK4 370 aa14.06□□□□□ -0.16
RABGGTA-203ENST00000543002 SCOCQ9UIL1 159 aa14.06□□□□□ -0.16
RABGGTA-203ENST00000543002 RAB22AQ9UL26 194 aa14.06□□□□□ -0.16
RABGGTA-203ENST00000543002 PEX16Q9Y5Y5 336 aa14.06□□□□□ -0.16
RABGGTA-203ENST00000543002 NAV3Q8IVL0 2385 aa14.05□□□□□ -0.16
RABGGTA-203ENST00000543002 A0A0B4J203 849 aa14.05□□□□□ -0.16
RABGGTA-203ENST00000543002 ODAMA1E959 279 aa14.05□□□□□ -0.16
RABGGTA-203ENST00000543002 MCRIP1C9JLW8 97 aa14.05□□□□□ -0.16
RABGGTA-203ENST00000543002 PDCD6O75340 191 aa14.05□□□□□ -0.16
RABGGTA-203ENST00000543002 GABARAPO95166 117 aa14.05□□□□□ -0.16
RABGGTA-203ENST00000543002 IL1AP01583 271 aa14.05□□□□□ -0.16
RABGGTA-203ENST00000543002 FAM157CP0CG43 387 aa14.05□□□□□ -0.16
RABGGTA-203ENST00000543002 ZNF728P0DKX0 622 aa14.05□□□□□ -0.16
RABGGTA-203ENST00000543002 CCL3L1P16619 93 aa14.05□□□□□ -0.16
RABGGTA-203ENST00000543002 DLX6P56179 175 aa14.05□□□□□ -0.16
RABGGTA-203ENST00000543002 NCS1P62166 190 aa14.05□□□□□ -0.16
RABGGTA-203ENST00000543002 RBM39Q14498 530 aaKnown RBP14.05□□□□□ -0.16
RABGGTA-203ENST00000543002 RSBN1Q5VWQ0 802 aaPredicted RBP14.05□□□□□ -0.16
RABGGTA-203ENST00000543002 BRICD5Q6PL45 260 aa14.05□□□□□ -0.16
RABGGTA-203ENST00000543002 VMO1Q7Z5L0 202 aa14.05□□□□□ -0.16
RABGGTA-203ENST00000543002 FAM89BQ8N5H3 189 aa14.05□□□□□ -0.16
RABGGTA-203ENST00000543002 C11orf42Q8N5U0 333 aa14.05□□□□□ -0.16
RABGGTA-203ENST00000543002 NEK7Q8TDX7 302 aa14.05□□□□□ -0.16
RABGGTA-203ENST00000543002 CORO2AQ92828 525 aa14.05□□□□□ -0.16
RABGGTA-203ENST00000543002 NICN1Q9BSH3 213 aa14.05□□□□□ -0.16
RABGGTA-203ENST00000543002 NAA50Q9GZZ1 169 aaKnown RBP14.05□□□□□ -0.16
RABGGTA-203ENST00000543002 METTL8Q9H825 291 aaKnown RBP14.05□□□□□ -0.16
RABGGTA-203ENST00000543002 UNKLQ9H9P5 680 aaKnown RBP14.05□□□□□ -0.16
RABGGTA-203ENST00000543002 ING3Q9NXR8 418 aa14.05□□□□□ -0.16
RABGGTA-203ENST00000543002 UBE2J1Q9Y385 318 aaPredicted RBP14.05□□□□□ -0.16
RABGGTA-203ENST00000543002 DSCAML1Q8TD84 2053 aa14.04□□□□□ -0.16
RABGGTA-203ENST00000543002 SETD2Q9BYW2 2564 aaPredicted RBP14.04□□□□□ -0.16
RABGGTA-203ENST00000543002 TRGV10A0A0A0MS01 117 aa14.04□□□□□ -0.16
RABGGTA-203ENST00000543002 A0A0A6YYD4 124 aa14.04□□□□□ -0.16
RABGGTA-203ENST00000543002 TRAV40A0A0B4J280 105 aa14.04□□□□□ -0.16
RABGGTA-203ENST00000543002 MEX3AA1L020 520 aaKnown RBP14.04□□□□□ -0.16
RABGGTA-203ENST00000543002 C17orf98A8MV24 154 aa14.04□□□□□ -0.16
RABGGTA-203ENST00000543002 RAB6AP20340 208 aa14.04□□□□□ -0.16
RABGGTA-203ENST00000543002 PRTN3P24158 256 aa14.04□□□□□ -0.16
RABGGTA-203ENST00000543002 CHATP28329 748 aa14.04□□□□□ -0.16
RABGGTA-203ENST00000543002 RPS19P39019 145 aaKnown RBP14.04□□□□□ -0.16
RABGGTA-203ENST00000543002 VBP1P61758 197 aa14.04□□□□□ -0.16
RABGGTA-203ENST00000543002 CTF1Q16619 201 aa14.04□□□□□ -0.16
RABGGTA-203ENST00000543002 SLC35E4Q6ICL7 350 aa14.04□□□□□ -0.16
RABGGTA-203ENST00000543002 PTX4Q96A99 478 aa14.04□□□□□ -0.16
RABGGTA-203ENST00000543002 ZNF714Q96N38 554 aa14.04□□□□□ -0.16
RABGGTA-203ENST00000543002 NEDD4LQ96PU5 975 aa14.04□□□□□ -0.16
RABGGTA-203ENST00000543002 SIRT7Q9NRC8 400 aa14.04□□□□□ -0.16
RABGGTA-203ENST00000543002 OR6C3Q9NZP0 311 aa14.04□□□□□ -0.16
RABGGTA-203ENST00000543002 KIF25Q9UIL4 384 aa14.04□□□□□ -0.16
RABGGTA-203ENST00000543002 NUP50Q9UKX7 468 aa14.04□□□□□ -0.16
RABGGTA-203ENST00000543002 MEIKINA0A087WXM9 373 aa14.03□□□□□ -0.16
RABGGTA-203ENST00000543002 hCG_1809904A0A1W2PP81 198 aa14.03□□□□□ -0.16
RABGGTA-203ENST00000543002 A0A1W2PPE2 198 aa14.03□□□□□ -0.16
RABGGTA-203ENST00000543002 A0A1W2PR64 198 aa14.03□□□□□ -0.16
RABGGTA-203ENST00000543002 A0A1W2PRV1 198 aa14.03□□□□□ -0.16
RABGGTA-203ENST00000543002 TMEM127O75204 238 aa14.03□□□□□ -0.16
RABGGTA-203ENST00000543002 RBP4P02753 201 aa14.03□□□□□ -0.16
RABGGTA-203ENST00000543002 IGHV4-38-2P0DP08 117 aa14.03□□□□□ -0.16
RABGGTA-203ENST00000543002 BLVRBP30043 206 aaPredicted RBP14.03□□□□□ -0.16
RABGGTA-203ENST00000543002 SERPINB10P48595 397 aa14.03□□□□□ -0.16
RABGGTA-203ENST00000543002 PLA2G7Q13093 441 aa14.03□□□□□ -0.16
RABGGTA-203ENST00000543002 TRAPPC6BQ86SZ2 158 aa14.03□□□□□ -0.16
RABGGTA-203ENST00000543002 CROCCP3Q8IVE0 287 aa14.03□□□□□ -0.16
RABGGTA-203ENST00000543002 TNFRSF14Q92956 283 aa14.03□□□□□ -0.16
RABGGTA-203ENST00000543002 TAS2R3Q9NYW6 316 aa14.03□□□□□ -0.16
RABGGTA-203ENST00000543002 MXRA5Q9NR99 2828 aa14.02□□□□□ -0.16
RABGGTA-203ENST00000543002 ANK3Q12955 4377 aaKnown RBP14.02□□□□□ -0.16
RABGGTA-203ENST00000543002 CENPVL3A0A0U1RRI6 287 aa14.02□□□□□ -0.17
RABGGTA-203ENST00000543002 TMEM30CPA0ZSE6 113 aa14.02□□□□□ -0.17
RABGGTA-203ENST00000543002 FOXI3A8MTJ6 420 aaPredicted RBP14.02□□□□□ -0.17
RABGGTA-203ENST00000543002 SOCS1O15524 211 aa14.02□□□□□ -0.17
RABGGTA-203ENST00000543002 CA11O75493 328 aa14.02□□□□□ -0.17
RABGGTA-203ENST00000543002 SNRPBP14678 240 aaKnown RBP14.02□□□□□ -0.17
RABGGTA-203ENST00000543002 HOXB4P17483 251 aaPredicted RBP14.02□□□□□ -0.17
RABGGTA-203ENST00000543002 EFNB2P52799 333 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms