RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 NAXEQ8NCW5 288 aa9.78□□□□□ -0.84
LGR5-203ENST00000540815 ZNF701Q9NV72 531 aaPredicted RBP9.78□□□□□ -0.84
LGR5-203ENST00000540815 GAR1Q9NY12 217 aaKnown RBP9.78□□□□□ -0.84
LGR5-203ENST00000540815 IL36GQ9NZH8 169 aa9.78□□□□□ -0.84
LGR5-203ENST00000540815 TEX13DA0A0J9YY54 714 aaPredicted RBP9.78□□□□□ -0.84
LGR5-203ENST00000540815 ZNF816-ZNF321PA0A0X1KG74 233 aa9.78□□□□□ -0.84
LGR5-203ENST00000540815 ARGFXA6NJG6 315 aa9.78□□□□□ -0.84
LGR5-203ENST00000540815 TNFSF15O95150 251 aa9.78□□□□□ -0.84
LGR5-203ENST00000540815 IGHV3-9P01782 118 aa9.78□□□□□ -0.84
LGR5-203ENST00000540815 SFTPBP07988 381 aa9.78□□□□□ -0.84
LGR5-203ENST00000540815 ECI1P42126 302 aa9.78□□□□□ -0.84
LGR5-203ENST00000540815 ARF1P84077 181 aaKnown RBP9.78□□□□□ -0.84
LGR5-203ENST00000540815 CYCSP99999 105 aaKnown RBP9.78□□□□□ -0.84
LGR5-203ENST00000540815 ZNF674Q2M3X9 581 aa9.78□□□□□ -0.84
LGR5-203ENST00000540815 RPUSD3Q6P087 351 aaKnown RBP9.78□□□□□ -0.84
LGR5-203ENST00000540815 CPEB3Q8NE35 698 aaKnown RBP9.78□□□□□ -0.84
LGR5-203ENST00000540815 RAB18Q9NP72 206 aa9.78□□□□□ -0.84
LGR5-203ENST00000540815 SLC7A11Q9UPY5 501 aa9.78□□□□□ -0.84
LGR5-203ENST00000540815 ZNF724A8MTY0 619 aa9.77□□□□□ -0.85
LGR5-203ENST00000540815 UMAD1C9J7I0 102 aa9.77□□□□□ -0.85
LGR5-203ENST00000540815 SUPT4H1P63272 117 aaKnown RBP9.77□□□□□ -0.85
LGR5-203ENST00000540815 PLGLB1Q02325 96 aa9.77□□□□□ -0.85
LGR5-203ENST00000540815 OR8G1Q15617 311 aa9.77□□□□□ -0.85
LGR5-203ENST00000540815 MIDNQ504T8 468 aa9.77□□□□□ -0.85
LGR5-203ENST00000540815 IL34Q6ZMJ4 242 aa9.77□□□□□ -0.85
LGR5-203ENST00000540815 COLCA1Q6ZS62 124 aa9.77□□□□□ -0.85
LGR5-203ENST00000540815 TUSC5Q8IXB3 177 aa9.77□□□□□ -0.85
LGR5-203ENST00000540815 C17orf78Q8N4C9 275 aa9.77□□□□□ -0.85
LGR5-203ENST00000540815 FER1L6-AS2Q96M78 137 aa9.77□□□□□ -0.85
LGR5-203ENST00000540815 RARRES2Q99969 163 aa9.77□□□□□ -0.85
LGR5-203ENST00000540815 BCO1Q9HAY6 547 aa9.77□□□□□ -0.85
LGR5-203ENST00000540815 TMEM9BQ9NQ34 198 aa9.77□□□□□ -0.85
LGR5-203ENST00000540815 ZNF407Q9C0G0 2248 aa9.77□□□□□ -0.85
LGR5-203ENST00000540815 PCNX2A6NKB5 2137 aa9.77□□□□□ -0.85
LGR5-203ENST00000540815 IGKV1D-8A0A087WSZ0 117 aa9.77□□□□□ -0.85
LGR5-203ENST00000540815 ZNF587BE7ETH6 402 aa9.77□□□□□ -0.85
LGR5-203ENST00000540815 CXCL1P09341 107 aa9.77□□□□□ -0.85
LGR5-203ENST00000540815 MDS2Q8NDY4 140 aa9.77□□□□□ -0.85
LGR5-203ENST00000540815 CALHM2Q9HA72 323 aa9.77□□□□□ -0.85
LGR5-203ENST00000540815 KLF13Q9Y2Y9 288 aaPredicted RBP9.77□□□□□ -0.85
LGR5-203ENST00000540815 IGKV1-12A0A0C4DH73 117 aa9.76□□□□□ -0.85
LGR5-203ENST00000540815 MSTNO14793 375 aa9.76□□□□□ -0.85
LGR5-203ENST00000540815 IGKV1D-12P01611 117 aa9.76□□□□□ -0.85
LGR5-203ENST00000540815 SP1P08047 785 aa9.76□□□□□ -0.85
LGR5-203ENST00000540815 GLI4P10075 376 aa9.76□□□□□ -0.85
LGR5-203ENST00000540815 HOXA5P20719 270 aa9.76□□□□□ -0.85
LGR5-203ENST00000540815 DTYMKP23919 212 aa9.76□□□□□ -0.85
LGR5-203ENST00000540815 CHATP28329 748 aa9.76□□□□□ -0.85
LGR5-203ENST00000540815 APLNRP35414 380 aa9.76□□□□□ -0.85
LGR5-203ENST00000540815 MEOX1P50221 254 aa9.76□□□□□ -0.85
LGR5-203ENST00000540815 RAB5CP51148 216 aa9.76□□□□□ -0.85
LGR5-203ENST00000540815 TAF9Q16594 264 aa9.76□□□□□ -0.85
LGR5-203ENST00000540815 KHDC3LQ587J8 217 aa9.76□□□□□ -0.85
LGR5-203ENST00000540815 PLCXD3Q63HM9 321 aa9.76□□□□□ -0.85
LGR5-203ENST00000540815 TMEM68Q96MH6 324 aa9.76□□□□□ -0.85
LGR5-203ENST00000540815 HDHD3Q9BSH5 251 aaPredicted RBP9.76□□□□□ -0.85
LGR5-203ENST00000540815 METTL8Q9H825 291 aaKnown RBP9.76□□□□□ -0.85
LGR5-203ENST00000540815 AK3Q9UIJ7 227 aa9.76□□□□□ -0.85
LGR5-203ENST00000540815 TGIF2-C20orf24A0A0A6YYL0 155 aa9.76□□□□□ -0.85
LGR5-203ENST00000540815 OR2C1O95371 312 aa9.76□□□□□ -0.85
LGR5-203ENST00000540815 RPS2P15880 293 aaKnown RBP9.76□□□□□ -0.85
LGR5-203ENST00000540815 GLRA1P23415 457 aa9.76□□□□□ -0.85
LGR5-203ENST00000540815 ANKRD55Q3KP44 614 aa9.76□□□□□ -0.85
LGR5-203ENST00000540815 BTNL8Q6UX41 500 aa9.76□□□□□ -0.85
LGR5-203ENST00000540815 OSR2Q8N2R0 312 aa9.76□□□□□ -0.85
LGR5-203ENST00000540815 PIGCQ92535 297 aa9.76□□□□□ -0.85
LGR5-203ENST00000540815 SMIM8Q96KF7 97 aa9.76□□□□□ -0.85
LGR5-203ENST00000540815 FAAP24Q9BTP7 215 aa9.76□□□□□ -0.85
LGR5-203ENST00000540815 TUBA4BQ9H853 241 aa9.76□□□□□ -0.85
LGR5-203ENST00000540815 ANXA10Q9UJ72 324 aa9.76□□□□□ -0.85
LGR5-203ENST00000540815 C14orf166Q9Y224 244 aaKnown RBP9.76□□□□□ -0.85
LGR5-203ENST00000540815 DNAJC13O75165 2243 aa9.76□□□□□ -0.85
LGR5-203ENST00000540815 TRBV6-7A0A0A0MS04 114 aa9.75□□□□□ -0.85
LGR5-203ENST00000540815 TRGC2P03986 189 aa9.75□□□□□ -0.85
LGR5-203ENST00000540815 CDX1P47902 265 aaPredicted RBP9.75□□□□□ -0.85
LGR5-203ENST00000540815 DVL1P1P54792 670 aaPredicted RBP9.75□□□□□ -0.85
LGR5-203ENST00000540815 RPS23P62266 143 aaKnown RBP9.75□□□□□ -0.85
LGR5-203ENST00000540815 FNDC9Q8TBE3 224 aa9.75□□□□□ -0.85
LGR5-203ENST00000540815 PRRG4Q9BZD6 226 aa9.75□□□□□ -0.85
LGR5-203ENST00000540815 ZNF581Q9P0T4 197 aa9.75□□□□□ -0.85
LGR5-203ENST00000540815 KLRC4-KLRK1H3BQV0 150 aa9.75□□□□□ -0.85
LGR5-203ENST00000540815 ZNF205O95201 554 aa9.75□□□□□ -0.85
LGR5-203ENST00000540815 TSPAN15O95858 294 aa9.75□□□□□ -0.85
LGR5-203ENST00000540815 HIST1H1BP16401 226 aaKnown RBP9.75□□□□□ -0.85
LGR5-203ENST00000540815 FOXG1P55316 489 aaPredicted RBP9.75□□□□□ -0.85
LGR5-203ENST00000540815 RNPS1Q15287 305 aaKnown RBP9.75□□□□□ -0.85
LGR5-203ENST00000540815 REC114Q7Z4M0 266 aa9.75□□□□□ -0.85
LGR5-203ENST00000540815 ZNF2Q9BSG1 426 aaPredicted RBP9.75□□□□□ -0.85
LGR5-203ENST00000540815 DECR2Q9NUI1 292 aa9.75□□□□□ -0.85
LGR5-203ENST00000540815 A0A096LPE4 126 aa9.74□□□□□ -0.85
LGR5-203ENST00000540815 A0A1W2PPZ6 126 aa9.74□□□□□ -0.85
LGR5-203ENST00000540815 IFNL4K9M1U5 179 aa9.74□□□□□ -0.85
LGR5-203ENST00000540815 EREGO14944 169 aa9.74□□□□□ -0.85
LGR5-203ENST00000540815 SCGB1D2O95969 90 aa9.74□□□□□ -0.85
LGR5-203ENST00000540815 PCP4P48539 62 aa9.74□□□□□ -0.85
LGR5-203ENST00000540815 PIGYQ3MUY2 71 aa9.74□□□□□ -0.85
LGR5-203ENST00000540815 OR10AD1Q8NGE0 317 aa9.74□□□□□ -0.85
LGR5-203ENST00000540815 APH1AQ96BI3 265 aa9.74□□□□□ -0.85
LGR5-203ENST00000540815 GEMIN2O14893 280 aaKnown RBP9.74□□□□□ -0.85
LGR5-203ENST00000540815 ZNHIT1O43257 154 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms