RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 RBM39Q14498 530 aaKnown RBP12.76□□□□□ -0.37
DDB1-218ENST00000540784 ATXN7L3Q14CW9 347 aaPredicted RBP12.76□□□□□ -0.37
DDB1-218ENST00000540784 FAM189A2Q15884 450 aa12.76□□□□□ -0.37
DDB1-218ENST00000540784 RAB12Q6IQ22 244 aa12.76□□□□□ -0.37
DDB1-218ENST00000540784 SFXN4Q6P4A7 337 aa12.76□□□□□ -0.37
DDB1-218ENST00000540784 KIR3DL3Q8N743 410 aa12.76□□□□□ -0.37
DDB1-218ENST00000540784 TPRX1Q8N7U7 411 aa12.76□□□□□ -0.37
DDB1-218ENST00000540784 NEK7Q8TDX7 302 aa12.76□□□□□ -0.37
DDB1-218ENST00000540784 UPRTQ96BW1 309 aa12.76□□□□□ -0.37
DDB1-218ENST00000540784 NEDD4LQ96PU5 975 aa12.76□□□□□ -0.37
DDB1-218ENST00000540784 TM2D1Q9BX74 207 aa12.76□□□□□ -0.37
DDB1-218ENST00000540784 DOCK11Q5JSL3 2073 aa12.76□□□□□ -0.37
DDB1-218ENST00000540784 TMEM272A0A1B0GTI8 110 aa12.75□□□□□ -0.37
DDB1-218ENST00000540784 M0R1W7 72 aa12.75□□□□□ -0.37
DDB1-218ENST00000540784 LDLRAD4O15165 306 aa12.75□□□□□ -0.37
DDB1-218ENST00000540784 IL1AP01583 271 aa12.75□□□□□ -0.37
DDB1-218ENST00000540784 SERPINB10P48595 397 aa12.75□□□□□ -0.37
DDB1-218ENST00000540784 NCS1P62166 190 aa12.75□□□□□ -0.37
DDB1-218ENST00000540784 IDNKQ5T6J7 187 aa12.75□□□□□ -0.37
DDB1-218ENST00000540784 SLC16A12Q6ZSM3 486 aa12.75□□□□□ -0.37
DDB1-218ENST00000540784 CROCCP3Q8IVE0 287 aa12.75□□□□□ -0.37
DDB1-218ENST00000540784 FAM89BQ8N5H3 189 aa12.75□□□□□ -0.37
DDB1-218ENST00000540784 ZNF565Q8N9K5 539 aa12.75□□□□□ -0.37
DDB1-218ENST00000540784 TEP1Q99973 2627 aaKnown RBP12.75□□□□□ -0.37
DDB1-218ENST00000540784 NAA50Q9GZZ1 169 aaKnown RBP12.75□□□□□ -0.37
DDB1-218ENST00000540784 SIRPDQ9H106 197 aa12.75□□□□□ -0.37
DDB1-218ENST00000540784 LPAR5Q9H1C0 372 aa12.75□□□□□ -0.37
DDB1-218ENST00000540784 NCOR1P1Q9H4R4 102 aa12.75□□□□□ -0.37
DDB1-218ENST00000540784 RCC2Q9P258 522 aaKnown RBP12.75□□□□□ -0.37
DDB1-218ENST00000540784 UBE2J1Q9Y385 318 aaPredicted RBP12.75□□□□□ -0.37
DDB1-218ENST00000540784 TLN2Q9Y4G6 2542 aa12.75□□□□□ -0.37
DDB1-218ENST00000540784 MEIKINA0A087WXM9 373 aa12.74□□□□□ -0.37
DDB1-218ENST00000540784 TRGV10A0A0A0MS01 117 aa12.74□□□□□ -0.37
DDB1-218ENST00000540784 A0A0B4J203 849 aa12.74□□□□□ -0.37
DDB1-218ENST00000540784 ODAMA1E959 279 aa12.74□□□□□ -0.37
DDB1-218ENST00000540784 MEX3AA1L020 520 aaKnown RBP12.74□□□□□ -0.37
DDB1-218ENST00000540784 TMEM127O75204 238 aa12.74□□□□□ -0.37
DDB1-218ENST00000540784 PDCD6O75340 191 aa12.74□□□□□ -0.37
DDB1-218ENST00000540784 ZNF728P0DKX0 622 aa12.74□□□□□ -0.37
DDB1-218ENST00000540784 MMP9P14780 707 aa12.74□□□□□ -0.37
DDB1-218ENST00000540784 SRD5A1P18405 259 aa12.74□□□□□ -0.37
DDB1-218ENST00000540784 RAB6AP20340 208 aa12.74□□□□□ -0.37
DDB1-218ENST00000540784 BLVRBP30043 206 aaPredicted RBP12.74□□□□□ -0.37
DDB1-218ENST00000540784 ZNF273Q14593 569 aa12.74□□□□□ -0.37
DDB1-218ENST00000540784 CTF1Q16619 201 aa12.74□□□□□ -0.37
DDB1-218ENST00000540784 NKAPLQ5M9Q1 402 aa12.74□□□□□ -0.37
DDB1-218ENST00000540784 SIGIRRQ6IA17 410 aa12.74□□□□□ -0.37
DDB1-218ENST00000540784 SLC35E4Q6ICL7 350 aa12.74□□□□□ -0.37
DDB1-218ENST00000540784 TRAPPC6BQ86SZ2 158 aa12.74□□□□□ -0.37
DDB1-218ENST00000540784 CLVS1Q8IUQ0 354 aaPredicted RBP12.74□□□□□ -0.37
DDB1-218ENST00000540784 Q8N7P7 452 aa12.74□□□□□ -0.37
DDB1-218ENST00000540784 CORO2AQ92828 525 aa12.74□□□□□ -0.37
DDB1-218ENST00000540784 COQ2Q96H96 371 aa12.74□□□□□ -0.37
DDB1-218ENST00000540784 TBX15Q96SF7 602 aa12.74□□□□□ -0.37
DDB1-218ENST00000540784 NICN1Q9BSH3 213 aa12.74□□□□□ -0.37
DDB1-218ENST00000540784 METTL8Q9H825 291 aaKnown RBP12.74□□□□□ -0.37
DDB1-218ENST00000540784 OR6C3Q9NZP0 311 aa12.74□□□□□ -0.37
DDB1-218ENST00000540784 LINC00312Q9Y6C7 94 aa12.74□□□□□ -0.37
DDB1-218ENST00000540784 TMEM30CPA0ZSE6 113 aa12.73□□□□□ -0.37
DDB1-218ENST00000540784 UBE2QL1A1L167 161 aa12.73□□□□□ -0.37
DDB1-218ENST00000540784 METTL21EPA6NDL7 271 aa12.73□□□□□ -0.37
DDB1-218ENST00000540784 SOCS1O15524 211 aa12.73□□□□□ -0.37
DDB1-218ENST00000540784 GABARAPO95166 117 aa12.73□□□□□ -0.37
DDB1-218ENST00000540784 CCL3L1P16619 93 aa12.73□□□□□ -0.37
DDB1-218ENST00000540784 PRTN3P24158 256 aa12.73□□□□□ -0.37
DDB1-218ENST00000540784 VEGFCP49767 419 aa12.73□□□□□ -0.37
DDB1-218ENST00000540784 PAX5Q02548 391 aa12.73□□□□□ -0.37
DDB1-218ENST00000540784 PLA2G7Q13093 441 aa12.73□□□□□ -0.37
DDB1-218ENST00000540784 RSBN1Q5VWQ0 802 aaPredicted RBP12.73□□□□□ -0.37
DDB1-218ENST00000540784 VMO1Q7Z5L0 202 aa12.73□□□□□ -0.37
DDB1-218ENST00000540784 OR56B1Q8NGI3 324 aa12.73□□□□□ -0.37
DDB1-218ENST00000540784 PLPPR1Q8TBJ4 325 aa12.73□□□□□ -0.37
DDB1-218ENST00000540784 LHX4Q969G2 390 aa12.73□□□□□ -0.37
DDB1-218ENST00000540784 PTX4Q96A99 478 aa12.73□□□□□ -0.37
DDB1-218ENST00000540784 ZNF714Q96N38 554 aa12.73□□□□□ -0.37
DDB1-218ENST00000540784 FAAP24Q9BTP7 215 aa12.73□□□□□ -0.37
DDB1-218ENST00000540784 PLEKHJ1Q9NW61 149 aa12.73□□□□□ -0.37
DDB1-218ENST00000540784 ETAA1Q9NY74 926 aa12.73□□□□□ -0.37
DDB1-218ENST00000540784 KIF25Q9UIL4 384 aa12.73□□□□□ -0.37
DDB1-218ENST00000540784 NUP50Q9UKX7 468 aa12.73□□□□□ -0.37
DDB1-218ENST00000540784 A0A0A6YYD4 124 aa12.72□□□□□ -0.37
DDB1-218ENST00000540784 C17orf98A8MV24 154 aa12.72□□□□□ -0.37
DDB1-218ENST00000540784 MT-ND4P03905 459 aa12.72□□□□□ -0.37
DDB1-218ENST00000540784 FAM157CP0CG43 387 aa12.72□□□□□ -0.37
DDB1-218ENST00000540784 SNRPBP14678 240 aaKnown RBP12.72□□□□□ -0.37
DDB1-218ENST00000540784 GZMHP20718 246 aa12.72□□□□□ -0.37
DDB1-218ENST00000540784 CHATP28329 748 aa12.72□□□□□ -0.37
DDB1-218ENST00000540784 EFNB2P52799 333 aa12.72□□□□□ -0.37
DDB1-218ENST00000540784 TMBIM6P55061 237 aa12.72□□□□□ -0.37
DDB1-218ENST00000540784 SCGB2A2Q13296 93 aa12.72□□□□□ -0.37
DDB1-218ENST00000540784 KLF17Q5JT82 389 aaPredicted RBP12.72□□□□□ -0.37
DDB1-218ENST00000540784 GPR157Q5UAW9 335 aa12.72□□□□□ -0.37
DDB1-218ENST00000540784 Q6ZTK2 550 aa12.72□□□□□ -0.37
DDB1-218ENST00000540784 C6orf201Q7Z4U5 140 aa12.72□□□□□ -0.37
DDB1-218ENST00000540784 C11orf42Q8N5U0 333 aa12.72□□□□□ -0.37
DDB1-218ENST00000540784 ATG5Q9H1Y0 275 aa12.72□□□□□ -0.37
DDB1-218ENST00000540784 SIRT7Q9NRC8 400 aa12.72□□□□□ -0.37
DDB1-218ENST00000540784 TAS2R3Q9NYW6 316 aa12.72□□□□□ -0.37
DDB1-218ENST00000540784 IGHV3OR16-10A0A075B7F0 116 aa12.71□□□□□ -0.37
DDB1-218ENST00000540784 CENPVL3A0A0U1RRI6 287 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms