RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 MRPL21Q7Z2W9 205 aaKnown RBP12.15□□□□□ -0.46
INO80E-203ENST00000540562 OR1K1Q8NGR3 316 aa12.15□□□□□ -0.46
INO80E-203ENST00000540562 MSI2Q96DH6 328 aaKnown RBP12.15□□□□□ -0.46
INO80E-203ENST00000540562 PLPPR2Q96GM1 343 aa12.15□□□□□ -0.46
INO80E-203ENST00000540562 SGCZQ96LD1 299 aa12.15□□□□□ -0.46
INO80E-203ENST00000540562 TCFL5Q9UL49 500 aa12.15□□□□□ -0.46
INO80E-203ENST00000540562 NSG2Q9Y328 171 aa12.15□□□□□ -0.46
INO80E-203ENST00000540562 BORCS7-ASMTA0A0B4J1R7 106 aa12.14□□□□□ -0.47
INO80E-203ENST00000540562 hCG_38984A0A1B0GV85 526 aa12.14□□□□□ -0.47
INO80E-203ENST00000540562 COLCA2A8K830 154 aa12.14□□□□□ -0.47
INO80E-203ENST00000540562 HMGB3O15347 200 aaKnown RBP12.14□□□□□ -0.47
INO80E-203ENST00000540562 DVL1P1P54792 670 aaPredicted RBP12.14□□□□□ -0.47
INO80E-203ENST00000540562 EWSR1Q01844 656 aaKnown RBP eCLIP12.14□□□□□ -0.47
INO80E-203ENST00000540562 HIKESHIQ53FT3 197 aa12.14□□□□□ -0.47
INO80E-203ENST00000540562 CXorf67Q86X51 503 aaPredicted RBP12.14□□□□□ -0.47
INO80E-203ENST00000540562 SFT2D1Q8WV19 159 aa12.14□□□□□ -0.47
INO80E-203ENST00000540562 CACFD1Q9UGQ2 172 aa12.14□□□□□ -0.47
INO80E-203ENST00000540562 PTPRZ1P23471 2315 aaPredicted RBP12.14□□□□□ -0.47
INO80E-203ENST00000540562 PIEZO2Q9H5I5 2752 aa12.14□□□□□ -0.47
INO80E-203ENST00000540562 IAPPP10997 89 aa12.14□□□□□ -0.47
INO80E-203ENST00000540562 VAMP2P63027 116 aa12.14□□□□□ -0.47
INO80E-203ENST00000540562 EIF5AP63241 154 aaKnown RBP12.14□□□□□ -0.47
INO80E-203ENST00000540562 HABP2Q14520 560 aaPredicted RBP12.14□□□□□ -0.47
INO80E-203ENST00000540562 IL11RAQ14626 422 aa12.14□□□□□ -0.47
INO80E-203ENST00000540562 ZNF343Q6P1L6 599 aa12.14□□□□□ -0.47
INO80E-203ENST00000540562 LGI3Q8N145 548 aa12.14□□□□□ -0.47
INO80E-203ENST00000540562 TMEM171Q8WVE6 324 aa12.14□□□□□ -0.47
INO80E-203ENST00000540562 STARD10Q9Y365 291 aa12.14□□□□□ -0.47
INO80E-203ENST00000540562 LIPGQ9Y5X9 500 aa12.14□□□□□ -0.47
INO80E-203ENST00000540562 FUT3P21217 361 aa12.14□□□□□ -0.47
INO80E-203ENST00000540562 CTSSP25774 331 aa12.14□□□□□ -0.47
INO80E-203ENST00000540562 NKX2-1P43699 371 aaPredicted RBP12.14□□□□□ -0.47
INO80E-203ENST00000540562 LHFPL2Q6ZUX7 228 aa12.14□□□□□ -0.47
INO80E-203ENST00000540562 DMBX1Q8NFW5 382 aa12.14□□□□□ -0.47
INO80E-203ENST00000540562 CT55Q8WUE5 264 aa12.14□□□□□ -0.47
INO80E-203ENST00000540562 USB1Q9BQ65 265 aaKnown RBP12.14□□□□□ -0.47
INO80E-203ENST00000540562 KCNJ16Q9NPI9 418 aa12.14□□□□□ -0.47
INO80E-203ENST00000540562 BIN3Q9NQY0 253 aa12.14□□□□□ -0.47
INO80E-203ENST00000540562 A0A087WZY1 265 aa12.13□□□□□ -0.47
INO80E-203ENST00000540562 ZNF816-ZNF321PA0A0X1KG74 233 aa12.13□□□□□ -0.47
INO80E-203ENST00000540562 MPPED1O15442 326 aa12.13□□□□□ -0.47
INO80E-203ENST00000540562 RHBDL1O75783 438 aa12.13□□□□□ -0.47
INO80E-203ENST00000540562 APOC1P02654 83 aa12.13□□□□□ -0.47
INO80E-203ENST00000540562 ATP6V0CP27449 155 aa12.13□□□□□ -0.47
INO80E-203ENST00000540562 OR2T2Q6IF00 324 aa12.13□□□□□ -0.47
INO80E-203ENST00000540562 LUZP4Q9P127 313 aa12.13□□□□□ -0.47
INO80E-203ENST00000540562 LOC102723996A0A087X1L8 192 aa12.13□□□□□ -0.47
INO80E-203ENST00000540562 ZNF724A8MTY0 619 aa12.13□□□□□ -0.47
INO80E-203ENST00000540562 PROB1E7EW31 1015 aa12.13□□□□□ -0.47
INO80E-203ENST00000540562 NDUFA2O43678 99 aa12.13□□□□□ -0.47
INO80E-203ENST00000540562 TMEM50AO95807 157 aa12.13□□□□□ -0.47
INO80E-203ENST00000540562 MDKP21741 143 aaPredicted RBP12.13□□□□□ -0.47
INO80E-203ENST00000540562 SNCAP37840 140 aa12.13□□□□□ -0.47
INO80E-203ENST00000540562 FGF8P55075 233 aaPredicted RBP12.13□□□□□ -0.47
INO80E-203ENST00000540562 HIST1H2BAQ96A08 127 aa12.13□□□□□ -0.47
INO80E-203ENST00000540562 SAT2Q96F10 170 aaPredicted RBP12.13□□□□□ -0.47
INO80E-203ENST00000540562 SUCNR1Q9BXA5 334 aa12.13□□□□□ -0.47
INO80E-203ENST00000540562 MTCH1Q9NZJ7 389 aa12.13□□□□□ -0.47
INO80E-203ENST00000540562 PPP1R3CQ9UQK1 317 aa12.13□□□□□ -0.47
INO80E-203ENST00000540562 LOXL2Q9Y4K0 774 aa12.13□□□□□ -0.47
INO80E-203ENST00000540562 H0YL77 283 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 CD5P06127 495 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 LYL1P12980 280 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 CA6P23280 308 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 SRD5A2P31213 254 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 PLGLB1Q02325 96 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 FABP9Q0Z7S8 132 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 HERPUD1Q15011 391 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 DAZAP2Q15038 168 aaPredicted RBP12.12□□□□□ -0.47
INO80E-203ENST00000540562 ZNF239Q16600 458 aaKnown RBP12.12□□□□□ -0.47
INO80E-203ENST00000540562 OR2C3Q8N628 320 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 SYT3Q9BQG1 590 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 WDR54Q9H977 334 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 GLRX2Q9NS18 164 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 TUBD1Q9UJT1 453 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 KCNS2Q9ULS6 477 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 OR6C6A6NF89 314 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 GJE1A6NN92 205 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 TAAR5O14804 337 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 TK1P04183 234 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 ALDH3B1P43353 468 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 CEBPDP49716 269 aaPredicted RBP12.12□□□□□ -0.47
INO80E-203ENST00000540562 DYNLT3P51808 116 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 FUT6P51993 359 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 SURF2Q15527 256 aaPredicted RBP12.12□□□□□ -0.47
INO80E-203ENST00000540562 DPPA2Q7Z7J5 298 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 HPSE2Q8WWQ2 592 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 DEFB127Q9H1M4 99 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 PARP11Q9NR21 331 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 SMCO4Q9NRQ5 59 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 TECTAO75443 2155 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 ADGRG4Q8IZF6 3080 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 TRBV23-1A0A0A0MS06 115 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 A0A0G2JRQ6 117 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 LOC102725191A0A1B0GVB3 256 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 C1orf196B1AJZ1 125 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 SIRPB1O00241 398 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 LAMTOR5O43504 91 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 CST2P09228 141 aa12.12□□□□□ -0.47
INO80E-203ENST00000540562 RAB1AP62820 205 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms