RNA–Protein interactions for RNA: ENST00000539177.1

CCDC144NL-202, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 443 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-202ENST00000539177 FGF16O43320 207 aa11.46□□□□□ -0.57
CCDC144NL-202ENST00000539177 OR2H2O95918 312 aa11.46□□□□□ -0.57
CCDC144NL-202ENST00000539177 IGKV1D-33P01593 117 aa11.46□□□□□ -0.57
CCDC144NL-202ENST00000539177 IGKV1-33P01594 117 aa11.46□□□□□ -0.57
CCDC144NL-202ENST00000539177 FUT6P51993 359 aa11.46□□□□□ -0.57
CCDC144NL-202ENST00000539177 CXCR4P61073 352 aa11.46□□□□□ -0.57
CCDC144NL-202ENST00000539177 KIR2DS1Q14954 304 aa11.46□□□□□ -0.57
CCDC144NL-202ENST00000539177 ZNF146Q15072 292 aa11.46□□□□□ -0.57
CCDC144NL-202ENST00000539177 PTGES3Q15185 160 aaKnown RBP11.46□□□□□ -0.57
CCDC144NL-202ENST00000539177 CXorf66Q5JRM2 361 aaPredicted RBP11.46□□□□□ -0.57
CCDC144NL-202ENST00000539177 ZNF322Q6U7Q0 402 aaPredicted RBP11.46□□□□□ -0.57
CCDC144NL-202ENST00000539177 THNSL2Q86YJ6 484 aa11.46□□□□□ -0.57
CCDC144NL-202ENST00000539177 GABARAPL3Q9BY60 117 aa11.46□□□□□ -0.57
CCDC144NL-202ENST00000539177 RIBC2Q9H4K1 309 aa11.46□□□□□ -0.57
CCDC144NL-202ENST00000539177 EXOSC4Q9NPD3 245 aaKnown RBP11.46□□□□□ -0.57
CCDC144NL-202ENST00000539177 TMEM14AQ9Y6G1 99 aa11.46□□□□□ -0.57
CCDC144NL-202ENST00000539177 TRBV2A0A0J9YWF9 115 aa11.45□□□□□ -0.58
CCDC144NL-202ENST00000539177 DHRS7CA6NNS2 312 aa11.45□□□□□ -0.58
CCDC144NL-202ENST00000539177 MITFO75030 526 aaPredicted RBP11.45□□□□□ -0.58
CCDC144NL-202ENST00000539177 RPP14O95059 124 aaKnown RBP11.45□□□□□ -0.58
CCDC144NL-202ENST00000539177 FRMD6-AS1P0C7T7 363 aa11.45□□□□□ -0.58
CCDC144NL-202ENST00000539177 CDK5Q00535 292 aa11.45□□□□□ -0.58
CCDC144NL-202ENST00000539177 SCN1BQ07699 218 aa11.45□□□□□ -0.58
CCDC144NL-202ENST00000539177 GPR50Q13585 617 aa11.45□□□□□ -0.58
CCDC144NL-202ENST00000539177 PNLIPRP3Q17RR3 467 aa11.45□□□□□ -0.58
CCDC144NL-202ENST00000539177 ZIK1Q3SY52 487 aaPredicted RBP11.45□□□□□ -0.58
CCDC144NL-202ENST00000539177 Q6ZSR3 168 aa11.45□□□□□ -0.58
CCDC144NL-202ENST00000539177 Q8IYB0 196 aa11.45□□□□□ -0.58
CCDC144NL-202ENST00000539177 OR9G1Q8NH87 305 aa11.45□□□□□ -0.58
CCDC144NL-202ENST00000539177 CORO2AQ92828 525 aa11.45□□□□□ -0.58
CCDC144NL-202ENST00000539177 HRASLS5Q96KN8 279 aa11.45□□□□□ -0.58
CCDC144NL-202ENST00000539177 CNN2Q99439 309 aaKnown RBP11.45□□□□□ -0.58
CCDC144NL-202ENST00000539177 ZMAT4Q9H898 229 aa11.45□□□□□ -0.58
CCDC144NL-202ENST00000539177 AMMECR1Q9Y4X0 333 aaPredicted RBP11.45□□□□□ -0.58
CCDC144NL-202ENST00000539177 SNX5Q9Y5X3 404 aa11.45□□□□□ -0.58
CCDC144NL-202ENST00000539177 A0A087X0M5 115 aa11.44□□□□□ -0.58
CCDC144NL-202ENST00000539177 LOC100130705A0A1B0GUX0 176 aa11.44□□□□□ -0.58
CCDC144NL-202ENST00000539177 A0A1B0GX30 115 aa11.44□□□□□ -0.58
CCDC144NL-202ENST00000539177 ODAMA1E959 279 aa11.44□□□□□ -0.58
CCDC144NL-202ENST00000539177 FUOMA2VDF0 154 aa11.44□□□□□ -0.58
CCDC144NL-202ENST00000539177 SLC16A6O15403 523 aa11.44□□□□□ -0.58
CCDC144NL-202ENST00000539177 SYT7O43581 403 aa11.44□□□□□ -0.58
CCDC144NL-202ENST00000539177 GATBO75879 557 aaKnown RBP11.44□□□□□ -0.58
CCDC144NL-202ENST00000539177 CCL1P22362 96 aa11.44□□□□□ -0.58
CCDC144NL-202ENST00000539177 CDX1P47902 265 aaPredicted RBP11.44□□□□□ -0.58
CCDC144NL-202ENST00000539177 GNG10P50151 68 aa11.44□□□□□ -0.58
CCDC144NL-202ENST00000539177 CDC42P60953 191 aa11.44□□□□□ -0.58
CCDC144NL-202ENST00000539177 ATXN7L3Q14CW9 347 aaPredicted RBP11.44□□□□□ -0.58
CCDC144NL-202ENST00000539177 LTC4SQ16873 150 aa11.44□□□□□ -0.58
CCDC144NL-202ENST00000539177 C17orf58Q2M2W7 97 aa11.44□□□□□ -0.58
CCDC144NL-202ENST00000539177 KRBOX4Q5JUW0 171 aa11.44□□□□□ -0.58
CCDC144NL-202ENST00000539177 SPIN3Q5JUX0 258 aa11.44□□□□□ -0.58
CCDC144NL-202ENST00000539177 SLC35F2Q8IXU6 374 aa11.44□□□□□ -0.58
CCDC144NL-202ENST00000539177 TRUB1Q8WWH5 349 aaKnown RBP11.44□□□□□ -0.58
CCDC144NL-202ENST00000539177 RFT1Q96AA3 541 aa11.44□□□□□ -0.58
CCDC144NL-202ENST00000539177 COQ2Q96H96 371 aa11.44□□□□□ -0.58
CCDC144NL-202ENST00000539177 KIRREL1Q96J84 757 aa11.44□□□□□ -0.58
CCDC144NL-202ENST00000539177 CITED4Q96RK1 184 aa11.44□□□□□ -0.58
CCDC144NL-202ENST00000539177 CHST5Q9GZS9 411 aa11.44□□□□□ -0.58
CCDC144NL-202ENST00000539177 Q9H521 79 aa11.44□□□□□ -0.58
CCDC144NL-202ENST00000539177 SEBOXQ9HB31 216 aaPredicted RBP11.44□□□□□ -0.58
CCDC144NL-202ENST00000539177 SLC25A19Q9HC21 320 aa11.44□□□□□ -0.58
CCDC144NL-202ENST00000539177 PCDHB16Q9NRJ7 776 aa11.44□□□□□ -0.58
CCDC144NL-202ENST00000539177 FAM118AQ9NWS6 357 aa11.44□□□□□ -0.58
CCDC144NL-202ENST00000539177 TVP23BQ9NYZ1 205 aa11.44□□□□□ -0.58
CCDC144NL-202ENST00000539177 MRM2Q9UI43 246 aaKnown RBP11.44□□□□□ -0.58
CCDC144NL-202ENST00000539177 GMPPBQ9Y5P6 360 aa11.44□□□□□ -0.58
CCDC144NL-202ENST00000539177 IGHV3-72A0A0B4J1Y9 119 aa11.43□□□□□ -0.58
CCDC144NL-202ENST00000539177 ZNF729A6NN14 1252 aaPredicted RBP11.43□□□□□ -0.58
CCDC144NL-202ENST00000539177 ZAR1LA6NP61 321 aa11.43□□□□□ -0.58
CCDC144NL-202ENST00000539177 AP4M1O00189 453 aa11.43□□□□□ -0.58
CCDC144NL-202ENST00000539177 MPZL2O60487 215 aa11.43□□□□□ -0.58
CCDC144NL-202ENST00000539177 CYB5AP00167 134 aa11.43□□□□□ -0.58
CCDC144NL-202ENST00000539177 ZNF44P15621 663 aa11.43□□□□□ -0.58
CCDC144NL-202ENST00000539177 GLP1RP43220 463 aa11.43□□□□□ -0.58
CCDC144NL-202ENST00000539177 GPR12P47775 334 aa11.43□□□□□ -0.58
CCDC144NL-202ENST00000539177 IZUMO2Q6UXV1 221 aa11.43□□□□□ -0.58
CCDC144NL-202ENST00000539177 BCDIN3DQ7Z5W3 292 aaKnown RBP11.43□□□□□ -0.58
CCDC144NL-202ENST00000539177 OR11H1Q8NG94 326 aa11.43□□□□□ -0.58
CCDC144NL-202ENST00000539177 CYGBQ8WWM9 190 aa11.43□□□□□ -0.58
CCDC144NL-202ENST00000539177 ZNF184Q99676 751 aaPredicted RBP11.43□□□□□ -0.58
CCDC144NL-202ENST00000539177 PPIL3Q9H2H8 161 aaKnown RBP11.43□□□□□ -0.58
CCDC144NL-202ENST00000539177 NCBP2LA6PVI3 153 aaKnown RBP11.42□□□□□ -0.58
CCDC144NL-202ENST00000539177 ZNF670-ZNF695F2Z2N8 137 aa11.42□□□□□ -0.58
CCDC144NL-202ENST00000539177 J3QR06 171 aa11.42□□□□□ -0.58
CCDC144NL-202ENST00000539177 SH2D1BO14796 132 aa11.42□□□□□ -0.58
CCDC144NL-202ENST00000539177 HCKP08631 526 aa11.42□□□□□ -0.58
CCDC144NL-202ENST00000539177 CAPGP40121 348 aa11.42□□□□□ -0.58
CCDC144NL-202ENST00000539177 RBP2P50120 134 aa11.42□□□□□ -0.58
CCDC144NL-202ENST00000539177 ATP1B3P54709 279 aa11.42□□□□□ -0.58
CCDC144NL-202ENST00000539177 AQP4P55087 323 aa11.42□□□□□ -0.58
CCDC144NL-202ENST00000539177 FOXE3Q13461 319 aa11.42□□□□□ -0.58
CCDC144NL-202ENST00000539177 FHL3Q13643 280 aa11.42□□□□□ -0.58
CCDC144NL-202ENST00000539177 SSX6Q7RTT6 188 aa11.42□□□□□ -0.58
CCDC144NL-202ENST00000539177 SETD9Q8NE22 299 aa11.42□□□□□ -0.58
CCDC144NL-202ENST00000539177 C4orf3Q8WVX3 66 aa11.42□□□□□ -0.58
CCDC144NL-202ENST00000539177 RNFT2Q96EX2 444 aa11.42□□□□□ -0.58
CCDC144NL-202ENST00000539177 TBX5Q99593 518 aa11.42□□□□□ -0.58
CCDC144NL-202ENST00000539177 ADI1Q9BV57 179 aa11.42□□□□□ -0.58
CCDC144NL-202ENST00000539177 HMG20AQ9NP66 347 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms