RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 A0A087X0M5 115 aa9.33□□□□□ -0.92
RTN3-209ENST00000538995 TRBV5-7A0A0A0MS05 114 aa9.33□□□□□ -0.92
RTN3-209ENST00000538995 TRAV24A0A0B4J272 114 aa9.33□□□□□ -0.92
RTN3-209ENST00000538995 A0A1B0GX30 115 aa9.33□□□□□ -0.92
RTN3-209ENST00000538995 A6NDX4 124 aa9.33□□□□□ -0.92
RTN3-209ENST00000538995 XPNPEP2O43895 674 aa9.33□□□□□ -0.92
RTN3-209ENST00000538995 CHST1O43916 411 aa9.33□□□□□ -0.92
RTN3-209ENST00000538995 MMP23AO75900 390 aa9.33□□□□□ -0.92
RTN3-209ENST00000538995 PAX6P26367 422 aa9.33□□□□□ -0.92
RTN3-209ENST00000538995 HTR1DP28221 377 aa9.33□□□□□ -0.92
RTN3-209ENST00000538995 OR3A4PP47883 348 aa9.33□□□□□ -0.92
RTN3-209ENST00000538995 ARHGDIBP52566 201 aa9.33□□□□□ -0.92
RTN3-209ENST00000538995 EFNB2P52799 333 aa9.33□□□□□ -0.92
RTN3-209ENST00000538995 WNT4P56705 351 aa9.33□□□□□ -0.92
RTN3-209ENST00000538995 RPS11P62280 158 aaKnown RBP eCLIP9.33□□□□□ -0.92
RTN3-209ENST00000538995 SRSF4Q08170 494 aaKnown RBP9.33□□□□□ -0.92
RTN3-209ENST00000538995 ATXN7L3Q14CW9 347 aaPredicted RBP9.33□□□□□ -0.92
RTN3-209ENST00000538995 PRAMEF5Q5TYX0 476 aa9.33□□□□□ -0.92
RTN3-209ENST00000538995 RNLSQ5VYX0 342 aa9.33□□□□□ -0.92
RTN3-209ENST00000538995 AHSA2Q719I0 299 aa9.33□□□□□ -0.92
RTN3-209ENST00000538995 Q8N2B8 174 aa9.33□□□□□ -0.92
RTN3-209ENST00000538995 ABHD12Q8N2K0 398 aa9.33□□□□□ -0.92
RTN3-209ENST00000538995 STX19Q8N4C7 294 aa9.33□□□□□ -0.92
RTN3-209ENST00000538995 OR4D6Q8NGJ1 314 aa9.33□□□□□ -0.92
RTN3-209ENST00000538995 OR13C5Q8NGS8 318 aa9.33□□□□□ -0.92
RTN3-209ENST00000538995 OR2T6Q8NHC8 308 aa9.33□□□□□ -0.92
RTN3-209ENST00000538995 S100A13Q99584 98 aa9.33□□□□□ -0.92
RTN3-209ENST00000538995 BARHL1Q9BZE3 327 aa9.33□□□□□ -0.92
RTN3-209ENST00000538995 LINC00574Q9H8X3 128 aa9.33□□□□□ -0.92
RTN3-209ENST00000538995 DPM3Q9P2X0 92 aa9.33□□□□□ -0.92
RTN3-209ENST00000538995 VWFP04275 2813 aa9.33□□□□□ -0.92
RTN3-209ENST00000538995 CMYA5Q8N3K9 4069 aa9.32□□□□□ -0.92
RTN3-209ENST00000538995 KBTBD11-OT1A0A1B0GTJ5 212 aa9.32□□□□□ -0.92
RTN3-209ENST00000538995 H3BUI4 141 aa9.32□□□□□ -0.92
RTN3-209ENST00000538995 F2RL2O00254 374 aa9.32□□□□□ -0.92
RTN3-209ENST00000538995 IGLV1-47P01700 117 aa9.32□□□□□ -0.92
RTN3-209ENST00000538995 CSTBP04080 98 aaKnown RBP9.32□□□□□ -0.92
RTN3-209ENST00000538995 MAPK3P27361 379 aaPredicted RBP9.32□□□□□ -0.92
RTN3-209ENST00000538995 RBM11P57052 281 aaKnown RBP9.32□□□□□ -0.92
RTN3-209ENST00000538995 SLC34A1Q06495 639 aa9.32□□□□□ -0.92
RTN3-209ENST00000538995 GPR176Q14439 515 aa9.32□□□□□ -0.92
RTN3-209ENST00000538995 MPV17LQ2QL34 196 aa9.32□□□□□ -0.92
RTN3-209ENST00000538995 PIGYQ3MUY2 71 aa9.32□□□□□ -0.92
RTN3-209ENST00000538995 PLA1AQ53H76 456 aa9.32□□□□□ -0.92
RTN3-209ENST00000538995 CDH26Q8IXH8 852 aa9.32□□□□□ -0.92
RTN3-209ENST00000538995 OSR2Q8N2R0 312 aa9.32□□□□□ -0.92
RTN3-209ENST00000538995 ZNF565Q8N9K5 539 aa9.32□□□□□ -0.92
RTN3-209ENST00000538995 BPIFB6Q8NFQ5 453 aa9.32□□□□□ -0.92
RTN3-209ENST00000538995 OR10K1Q8NGX5 313 aa9.32□□□□□ -0.92
RTN3-209ENST00000538995 NR1H4Q96RI1 486 aaPredicted RBP9.32□□□□□ -0.92
RTN3-209ENST00000538995 ZNF184Q99676 751 aaPredicted RBP9.32□□□□□ -0.92
RTN3-209ENST00000538995 PPIL3Q9H2H8 161 aaKnown RBP9.32□□□□□ -0.92
RTN3-209ENST00000538995 MMP27Q9H306 513 aa9.32□□□□□ -0.92
RTN3-209ENST00000538995 FOXJ3Q9UPW0 622 aa9.32□□□□□ -0.92
RTN3-209ENST00000538995 ST3GAL6Q9Y274 331 aa9.32□□□□□ -0.92
RTN3-209ENST00000538995 ERGIC3Q9Y282 383 aa9.32□□□□□ -0.92
RTN3-209ENST00000538995 TRAV8-7A0A075B6U6 113 aa9.31□□□□□ -0.92
RTN3-209ENST00000538995 MEIKINA0A087WXM9 373 aa9.31□□□□□ -0.92
RTN3-209ENST00000538995 MEGF11A6BM72 1044 aa9.31□□□□□ -0.92
RTN3-209ENST00000538995 FAM90A22PA8MWA6 464 aa9.31□□□□□ -0.92
RTN3-209ENST00000538995 LEUTXA8MZ59 168 aa9.31□□□□□ -0.92
RTN3-209ENST00000538995 OOSP1A8MZH6 123 aa9.31□□□□□ -0.92
RTN3-209ENST00000538995 ANKRD65E5RJM6 399 aa9.31□□□□□ -0.92
RTN3-209ENST00000538995 HSPB6O14558 160 aa9.31□□□□□ -0.92
RTN3-209ENST00000538995 CDRT1O95170 752 aa9.31□□□□□ -0.92
RTN3-209ENST00000538995 HTR3BO95264 441 aa9.31□□□□□ -0.92
RTN3-209ENST00000538995 IL1AP01583 271 aa9.31□□□□□ -0.92
RTN3-209ENST00000538995 CGB3P0DN86 165 aa9.31□□□□□ -0.92
RTN3-209ENST00000538995 CGB7P0DN87 165 aa9.31□□□□□ -0.92
RTN3-209ENST00000538995 GTF2F2P13984 249 aa9.31□□□□□ -0.92
RTN3-209ENST00000538995 CELP19835 753 aa9.31□□□□□ -0.92
RTN3-209ENST00000538995 C21orf33P30042 268 aaPredicted RBP9.31□□□□□ -0.92
RTN3-209ENST00000538995 CEACAM3P40198 252 aa9.31□□□□□ -0.92
RTN3-209ENST00000538995 GLP1RP43220 463 aa9.31□□□□□ -0.92
RTN3-209ENST00000538995 HERPUD1Q15011 391 aa9.31□□□□□ -0.92
RTN3-209ENST00000538995 C17orf58Q2M2W7 97 aa9.31□□□□□ -0.92
RTN3-209ENST00000538995 C2orf68Q2NKX9 166 aa9.31□□□□□ -0.92
RTN3-209ENST00000538995 HLA-DRB5Q30154 266 aa9.31□□□□□ -0.92
RTN3-209ENST00000538995 RSBN1Q5VWQ0 802 aaPredicted RBP9.31□□□□□ -0.92
RTN3-209ENST00000538995 CCBE1Q6UXH8 406 aaPredicted RBP9.31□□□□□ -0.92
RTN3-209ENST00000538995 C16orf82Q7Z2V1 217 aa9.31□□□□□ -0.92
RTN3-209ENST00000538995 NANOGP1Q8N7R0 232 aa9.31□□□□□ -0.92
RTN3-209ENST00000538995 NKAIN3Q8N8D7 197 aa9.31□□□□□ -0.92
RTN3-209ENST00000538995 ZFP41Q8N8Y5 198 aa9.31□□□□□ -0.92
RTN3-209ENST00000538995 OR10A7Q8NGE5 316 aa9.31□□□□□ -0.92
RTN3-209ENST00000538995 MRPS24Q96EL2 167 aaKnown RBP9.31□□□□□ -0.92
RTN3-209ENST00000538995 KIRREL1Q96J84 757 aa9.31□□□□□ -0.92
RTN3-209ENST00000538995 DERL3Q96Q80 235 aa9.31□□□□□ -0.92
RTN3-209ENST00000538995 OR14A2Q96R54 314 aa9.31□□□□□ -0.92
RTN3-209ENST00000538995 DPCDQ9BVM2 203 aaPredicted RBP9.31□□□□□ -0.92
RTN3-209ENST00000538995 CALYQ9NYX4 217 aa9.31□□□□□ -0.92
RTN3-209ENST00000538995 KIF25Q9UIL4 384 aa9.31□□□□□ -0.92
RTN3-209ENST00000538995 HILPDAQ9Y5L2 63 aa9.31□□□□□ -0.92
RTN3-209ENST00000538995 WNK1Q9H4A3 2382 aa9.31□□□□□ -0.92
RTN3-209ENST00000538995 MAGEA13PA6NCF6 341 aa9.3□□□□□ -0.92
RTN3-209ENST00000538995 TOR1AO14656 332 aa9.3□□□□□ -0.92
RTN3-209ENST00000538995 OR7C1O76099 320 aaPredicted RBP9.3□□□□□ -0.92
RTN3-209ENST00000538995 CDK1P06493 297 aa9.3□□□□□ -0.92
RTN3-209ENST00000538995 SERPINA2P20848 420 aa9.3□□□□□ -0.92
RTN3-209ENST00000538995 BRS3P32247 399 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms