RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 VGLL3A8MV65 326 aa2.84□□□□□ -1.95
PRKDC-208ENST00000536710 POLR3GO15318 223 aaPredicted RBP2.84□□□□□ -1.95
PRKDC-208ENST00000536710 RD3LP0DJH9 198 aa2.84□□□□□ -1.95
PRKDC-208ENST00000536710 ZNF3P17036 446 aa2.84□□□□□ -1.95
PRKDC-208ENST00000536710 AKR1C4P17516 323 aa2.84□□□□□ -1.95
PRKDC-208ENST00000536710 ATF1P18846 271 aa2.84□□□□□ -1.95
PRKDC-208ENST00000536710 KDELR2P33947 212 aa2.84□□□□□ -1.95
PRKDC-208ENST00000536710 RHOAP61586 193 aa2.84□□□□□ -1.95
PRKDC-208ENST00000536710 DMTNQ08495 405 aa2.84□□□□□ -1.95
PRKDC-208ENST00000536710 IGFBP7Q16270 282 aa2.84□□□□□ -1.95
PRKDC-208ENST00000536710 LGALSLQ3ZCW2 172 aaPredicted RBP2.84□□□□□ -1.95
PRKDC-208ENST00000536710 ELP2Q6IA86 826 aa2.84□□□□□ -1.95
PRKDC-208ENST00000536710 RORBQ92753 470 aa2.84□□□□□ -1.95
PRKDC-208ENST00000536710 DUSP21Q9H596 190 aa2.84□□□□□ -1.95
PRKDC-208ENST00000536710 ASF1BQ9NVP2 202 aa2.84□□□□□ -1.95
PRKDC-208ENST00000536710 GMEB1Q9Y692 573 aa2.84□□□□□ -1.95
PRKDC-208ENST00000536710 USP42Q9H9J4 1324 aaKnown RBP2.84□□□□□ -1.96
PRKDC-208ENST00000536710 A0A0B4J2C4 111 aa2.83□□□□□ -1.96
PRKDC-208ENST00000536710 H3BQ85 93 aa2.83□□□□□ -1.96
PRKDC-208ENST00000536710 SMLR1H3BR10 107 aa2.83□□□□□ -1.96
PRKDC-208ENST00000536710 TCF21O43680 179 aa2.83□□□□□ -1.96
PRKDC-208ENST00000536710 NDUFS6O75380 124 aaKnown RBP2.83□□□□□ -1.96
PRKDC-208ENST00000536710 INAFM2P0DMQ5 153 aa2.83□□□□□ -1.96
PRKDC-208ENST00000536710 CD151P48509 253 aa2.83□□□□□ -1.96
PRKDC-208ENST00000536710 DYNLL1P63167 89 aaKnown RBP2.83□□□□□ -1.96
PRKDC-208ENST00000536710 ZBTB6Q15916 424 aa2.83□□□□□ -1.96
PRKDC-208ENST00000536710 TMEM249Q2WGJ8 235 aa2.83□□□□□ -1.96
PRKDC-208ENST00000536710 PDZD11Q5EBL8 140 aa2.83□□□□□ -1.96
PRKDC-208ENST00000536710 LAIR2Q6ISS4 152 aa2.83□□□□□ -1.96
PRKDC-208ENST00000536710 ADM2Q7Z4H4 148 aa2.83□□□□□ -1.96
PRKDC-208ENST00000536710 CRLF3Q8IUI8 442 aa2.83□□□□□ -1.96
PRKDC-208ENST00000536710 CPNE9Q8IYJ1 553 aa2.83□□□□□ -1.96
PRKDC-208ENST00000536710 RNASEH2CQ8TDP1 164 aaKnown RBP2.83□□□□□ -1.96
PRKDC-208ENST00000536710 LRRC45Q96CN5 670 aa2.83□□□□□ -1.96
PRKDC-208ENST00000536710 BAZ1BQ9UIG0 1483 aaKnown RBP2.83□□□□□ -1.96
PRKDC-208ENST00000536710 IGHV1-45A0A0A0MS14 117 aa2.82□□□□□ -1.96
PRKDC-208ENST00000536710 EFCAB9A8MZ26 197 aa2.82□□□□□ -1.96
PRKDC-208ENST00000536710 BRI3O95415 125 aa2.82□□□□□ -1.96
PRKDC-208ENST00000536710 IGKV1D-33P01593 117 aa2.82□□□□□ -1.96
PRKDC-208ENST00000536710 IGKV1-33P01594 117 aa2.82□□□□□ -1.96
PRKDC-208ENST00000536710 LIMS3P0CW19 117 aa2.82□□□□□ -1.96
PRKDC-208ENST00000536710 LIMS4P0CW20 117 aa2.82□□□□□ -1.96
PRKDC-208ENST00000536710 CD34P28906 385 aa2.82□□□□□ -1.96
PRKDC-208ENST00000536710 TGFBR2P37173 567 aa2.82□□□□□ -1.96
PRKDC-208ENST00000536710 DEFB134Q4QY38 66 aa2.82□□□□□ -1.96
PRKDC-208ENST00000536710 RBM48Q5RL73 367 aaKnown RBP2.82□□□□□ -1.96
PRKDC-208ENST00000536710 CLEC20AQ6ZU45 233 aa2.82□□□□□ -1.96
PRKDC-208ENST00000536710 SLC25A45Q8N413 288 aa2.82□□□□□ -1.96
PRKDC-208ENST00000536710 ZIC4Q8N9L1 334 aa2.82□□□□□ -1.96
PRKDC-208ENST00000536710 CCDC12Q8WUD4 166 aaPredicted RBP2.82□□□□□ -1.96
PRKDC-208ENST00000536710 CLDN23Q96B33 292 aa2.82□□□□□ -1.96
PRKDC-208ENST00000536710 PPWD1Q96BP3 646 aaKnown RBP2.82□□□□□ -1.96
PRKDC-208ENST00000536710 TRNT1Q96Q11 434 aaKnown RBP2.82□□□□□ -1.96
PRKDC-208ENST00000536710 NRBP2Q9NSY0 501 aa2.82□□□□□ -1.96
PRKDC-208ENST00000536710 COMMD9Q9P000 198 aa2.82□□□□□ -1.96
PRKDC-208ENST00000536710 FBXL3Q9UKT7 428 aa2.82□□□□□ -1.96
PRKDC-208ENST00000536710 MAP3K19Q56UN5 1328 aa2.82□□□□□ -1.96
PRKDC-208ENST00000536710 LRPPRCP42704 1394 aaKnown RBP2.82□□□□□ -1.96
PRKDC-208ENST00000536710 TMEM131Q92545 1883 aa2.82□□□□□ -1.96
PRKDC-208ENST00000536710 A6NED7 52 aa2.81□□□□□ -1.96
PRKDC-208ENST00000536710 C15orf65H3BRN8 121 aa2.81□□□□□ -1.96
PRKDC-208ENST00000536710 IGHMP01871 453 aa2.81□□□□□ -1.96
PRKDC-208ENST00000536710 HLA-AP01891 365 aaKnown RBP2.81□□□□□ -1.96
PRKDC-208ENST00000536710 GABRA1P14867 456 aa2.81□□□□□ -1.96
PRKDC-208ENST00000536710 CNTFRP26992 372 aa2.81□□□□□ -1.96
PRKDC-208ENST00000536710 CRABP2P29373 138 aa2.81□□□□□ -1.96
PRKDC-208ENST00000536710 RCVRNP35243 200 aa2.81□□□□□ -1.96
PRKDC-208ENST00000536710 ACTR1BP42025 376 aa2.81□□□□□ -1.96
PRKDC-208ENST00000536710 HSPA13P48723 471 aa2.81□□□□□ -1.96
PRKDC-208ENST00000536710 ZNF235Q14590 738 aa2.81□□□□□ -1.96
PRKDC-208ENST00000536710 FAM162BQ5T6X4 162 aa2.81□□□□□ -1.96
PRKDC-208ENST00000536710 BOD1L2Q8IYS8 172 aa2.81□□□□□ -1.96
PRKDC-208ENST00000536710 MAL2Q969L2 176 aa2.81□□□□□ -1.96
PRKDC-208ENST00000536710 TMEM56Q96MV1 263 aa2.81□□□□□ -1.96
PRKDC-208ENST00000536710 ASCL3Q9NQ33 180 aa2.81□□□□□ -1.96
PRKDC-208ENST00000536710 DMAC2Q9NW81 257 aa2.81□□□□□ -1.96
PRKDC-208ENST00000536710 ZNF586Q9NXT0 402 aa2.81□□□□□ -1.96
PRKDC-208ENST00000536710 TBL2Q9Y4P3 447 aaKnown RBP2.81□□□□□ -1.96
PRKDC-208ENST00000536710 R4GN34 69 aa2.81□□□□□ -1.96
PRKDC-208ENST00000536710 POLR3AO14802 1390 aaPredicted RBP2.81□□□□□ -1.96
PRKDC-208ENST00000536710 ARGFXA6NJG6 315 aa2.8□□□□□ -1.96
PRKDC-208ENST00000536710 A8MWP4 228 aa2.8□□□□□ -1.96
PRKDC-208ENST00000536710 C4orf51C9J302 202 aa2.8□□□□□ -1.96
PRKDC-208ENST00000536710 F8VZ95 297 aa2.8□□□□□ -1.96
PRKDC-208ENST00000536710 MPZL2O60487 215 aa2.8□□□□□ -1.96
PRKDC-208ENST00000536710 POP7O75817 140 aaKnown RBP2.8□□□□□ -1.96
PRKDC-208ENST00000536710 RAB36O95755 333 aa2.8□□□□□ -1.96
PRKDC-208ENST00000536710 HRES1P13985 223 aa2.8□□□□□ -1.96
PRKDC-208ENST00000536710 PVALBP20472 110 aaPredicted RBP2.8□□□□□ -1.96
PRKDC-208ENST00000536710 PSMD7P51665 324 aa2.8□□□□□ -1.96
PRKDC-208ENST00000536710 KRTAP10-10P60014 251 aa2.8□□□□□ -1.96
PRKDC-208ENST00000536710 RAB8AP61006 207 aa2.8□□□□□ -1.96
PRKDC-208ENST00000536710 RAB2AP61019 212 aa2.8□□□□□ -1.96
PRKDC-208ENST00000536710 SLC9A3R2Q15599 337 aa2.8□□□□□ -1.96
PRKDC-208ENST00000536710 ZNF141Q15928 474 aa2.8□□□□□ -1.96
PRKDC-208ENST00000536710 BCL2A1Q16548 175 aa2.8□□□□□ -1.96
PRKDC-208ENST00000536710 PYDC2Q56P42 97 aa2.8□□□□□ -1.96
PRKDC-208ENST00000536710 DTD1Q8TEA8 209 aa2.8□□□□□ -1.96
PRKDC-208ENST00000536710 REEP6Q96HR9 211 aa2.8□□□□□ -1.96
PRKDC-208ENST00000536710 EBPLQ9BY08 206 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms