RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 ST3GAL6Q9Y274 331 aa10.67□□□□□ -0.7
PRKDC-206ENST00000536429 UBE2J1Q9Y385 318 aaPredicted RBP10.67□□□□□ -0.7
PRKDC-206ENST00000536429 SESN1Q9Y6P5 492 aa10.67□□□□□ -0.7
PRKDC-206ENST00000536429 TRGV10A0A0A0MS01 117 aa10.66□□□□□ -0.7
PRKDC-206ENST00000536429 IGHV2-26A0A0B4J1V2 119 aa10.66□□□□□ -0.7
PRKDC-206ENST00000536429 TRAV39A0A0B4J263 110 aa10.66□□□□□ -0.7
PRKDC-206ENST00000536429 MEGF11A6BM72 1044 aa10.66□□□□□ -0.7
PRKDC-206ENST00000536429 H3BUX3 64 aa10.66□□□□□ -0.7
PRKDC-206ENST00000536429 HSMCR30P0CW71 290 aa10.66□□□□□ -0.7
PRKDC-206ENST00000536429 CDK2P24941 298 aa10.66□□□□□ -0.7
PRKDC-206ENST00000536429 VHLP40337 213 aa10.66□□□□□ -0.7
PRKDC-206ENST00000536429 RAG2P55895 527 aa10.66□□□□□ -0.7
PRKDC-206ENST00000536429 RPS25P62851 125 aaKnown RBP10.66□□□□□ -0.7
PRKDC-206ENST00000536429 DYNC1I2Q13409 638 aaKnown RBP10.66□□□□□ -0.7
PRKDC-206ENST00000536429 LY6EQ16553 131 aa10.66□□□□□ -0.7
PRKDC-206ENST00000536429 C17orf58Q2M2W7 97 aa10.66□□□□□ -0.7
PRKDC-206ENST00000536429 NHLRC3Q5JS37 347 aa10.66□□□□□ -0.7
PRKDC-206ENST00000536429 RSBN1Q5VWQ0 802 aaPredicted RBP10.66□□□□□ -0.7
PRKDC-206ENST00000536429 ZNF626Q68DY1 528 aa10.66□□□□□ -0.7
PRKDC-206ENST00000536429 BRICD5Q6PL45 260 aa10.66□□□□□ -0.7
PRKDC-206ENST00000536429 GLIPR1L1Q6UWM5 242 aa10.66□□□□□ -0.7
PRKDC-206ENST00000536429 LRRTM1Q86UE6 522 aa10.66□□□□□ -0.7
PRKDC-206ENST00000536429 SUMF2Q8NBJ7 301 aa10.66□□□□□ -0.7
PRKDC-206ENST00000536429 OR13A1Q8NGR1 328 aa10.66□□□□□ -0.7
PRKDC-206ENST00000536429 PIFOQ8TCI5 191 aa10.66□□□□□ -0.7
PRKDC-206ENST00000536429 TMEM203Q969S6 136 aa10.66□□□□□ -0.7
PRKDC-206ENST00000536429 ZNF747Q9BV97 191 aa10.66□□□□□ -0.7
PRKDC-206ENST00000536429 TMEM133Q9H2Q1 129 aa10.66□□□□□ -0.7
PRKDC-206ENST00000536429 KIF25Q9UIL4 384 aa10.66□□□□□ -0.7
PRKDC-206ENST00000536429 RAB26Q9ULW5 256 aa10.66□□□□□ -0.7
PRKDC-206ENST00000536429 MRPS28Q9Y2Q9 187 aaKnown RBP10.66□□□□□ -0.7
PRKDC-206ENST00000536429 NBEAL1Q6ZS30 2694 aa10.65□□□□□ -0.7
PRKDC-206ENST00000536429 SC5DO75845 299 aa10.65□□□□□ -0.7
PRKDC-206ENST00000536429 OR7C1O76099 320 aaPredicted RBP10.65□□□□□ -0.7
PRKDC-206ENST00000536429 NDUFA7O95182 113 aa10.65□□□□□ -0.7
PRKDC-206ENST00000536429 CSTBP04080 98 aaKnown RBP10.65□□□□□ -0.7
PRKDC-206ENST00000536429 CRYBA1P05813 215 aa10.65□□□□□ -0.7
PRKDC-206ENST00000536429 RAB13P51153 203 aa10.65□□□□□ -0.7
PRKDC-206ENST00000536429 LGALS4P56470 323 aa10.65□□□□□ -0.7
PRKDC-206ENST00000536429 SRSF4Q08170 494 aaKnown RBP10.65□□□□□ -0.7
PRKDC-206ENST00000536429 TPBGQ13641 420 aa10.65□□□□□ -0.7
PRKDC-206ENST00000536429 LRRC75BQ2VPJ9 315 aa10.65□□□□□ -0.7
PRKDC-206ENST00000536429 AWAT2Q6E213 333 aa10.65□□□□□ -0.7
PRKDC-206ENST00000536429 PRSS48Q7RTY5 328 aa10.65□□□□□ -0.7
PRKDC-206ENST00000536429 CEACAM19Q7Z692 300 aa10.65□□□□□ -0.7
PRKDC-206ENST00000536429 MS4A15Q8N5U1 240 aa10.65□□□□□ -0.7
PRKDC-206ENST00000536429 TMEM104Q8NE00 496 aa10.65□□□□□ -0.7
PRKDC-206ENST00000536429 UFD1Q92890 307 aa10.65□□□□□ -0.7
PRKDC-206ENST00000536429 S100A13Q99584 98 aa10.65□□□□□ -0.7
PRKDC-206ENST00000536429 DPCDQ9BVM2 203 aaPredicted RBP10.65□□□□□ -0.7
PRKDC-206ENST00000536429 BANF2Q9H503 90 aa10.65□□□□□ -0.7
PRKDC-206ENST00000536429 DSCAML1Q8TD84 2053 aa10.65□□□□□ -0.7
PRKDC-206ENST00000536429 KIAA2026Q5HYC2 2103 aa10.64□□□□□ -0.71
PRKDC-206ENST00000536429 MEIKINA0A087WXM9 373 aa10.64□□□□□ -0.71
PRKDC-206ENST00000536429 FUOMA2VDF0 154 aa10.64□□□□□ -0.71
PRKDC-206ENST00000536429 BTBD17A6NE02 478 aa10.64□□□□□ -0.71
PRKDC-206ENST00000536429 CGB3P0DN86 165 aa10.64□□□□□ -0.71
PRKDC-206ENST00000536429 CGB7P0DN87 165 aa10.64□□□□□ -0.71
PRKDC-206ENST00000536429 GTF2F2P13984 249 aa10.64□□□□□ -0.71
PRKDC-206ENST00000536429 MAPK3P27361 379 aaPredicted RBP10.64□□□□□ -0.71
PRKDC-206ENST00000536429 GLP1RP43220 463 aa10.64□□□□□ -0.71
PRKDC-206ENST00000536429 KRTAP10-3P60369 221 aa10.64□□□□□ -0.71
PRKDC-206ENST00000536429 SSX2Q16385 188 aa10.64□□□□□ -0.71
PRKDC-206ENST00000536429 RBM48Q5RL73 367 aaKnown RBP10.64□□□□□ -0.71
PRKDC-206ENST00000536429 HEPN1Q6WQI6 88 aa10.64□□□□□ -0.71
PRKDC-206ENST00000536429 TMEM91Q6ZNR0 172 aa10.64□□□□□ -0.71
PRKDC-206ENST00000536429 Q6ZSV7 163 aa10.64□□□□□ -0.71
PRKDC-206ENST00000536429 OR4P4Q8NGL7 312 aa10.64□□□□□ -0.71
PRKDC-206ENST00000536429 OR5R1Q8NH85 324 aa10.64□□□□□ -0.71
PRKDC-206ENST00000536429 MRGPRDQ8TDS7 321 aa10.64□□□□□ -0.71
PRKDC-206ENST00000536429 FOXRED1Q96CU9 486 aaPredicted RBP10.64□□□□□ -0.71
PRKDC-206ENST00000536429 GAL3ST2Q9H3Q3 398 aa10.64□□□□□ -0.71
PRKDC-206ENST00000536429 IFT22Q9H7X7 185 aa10.64□□□□□ -0.71
PRKDC-206ENST00000536429 ZNF286AQ9HBT8 521 aa10.64□□□□□ -0.71
PRKDC-206ENST00000536429 TAS2R3Q9NYW6 316 aa10.64□□□□□ -0.71
PRKDC-206ENST00000536429 TBL2Q9Y4P3 447 aaKnown RBP10.64□□□□□ -0.71
PRKDC-206ENST00000536429 KBTBD11-OT1A0A1B0GTJ5 212 aa10.63□□□□□ -0.71
PRKDC-206ENST00000536429 CHST1O43916 411 aa10.63□□□□□ -0.71
PRKDC-206ENST00000536429 ZNF780AO75290 641 aaPredicted RBP10.63□□□□□ -0.71
PRKDC-206ENST00000536429 UCHL1P09936 223 aa10.63□□□□□ -0.71
PRKDC-206ENST00000536429 SSTR5P35346 364 aa10.63□□□□□ -0.71
PRKDC-206ENST00000536429 MLLT11Q13015 90 aaPredicted RBP10.63□□□□□ -0.71
PRKDC-206ENST00000536429 GPR50Q13585 617 aa10.63□□□□□ -0.71
PRKDC-206ENST00000536429 FAM189A2Q15884 450 aa10.63□□□□□ -0.71
PRKDC-206ENST00000536429 ATAD3CQ5T2N8 411 aa10.63□□□□□ -0.71
PRKDC-206ENST00000536429 DHRS7BQ6IAN0 325 aaPredicted RBP10.63□□□□□ -0.71
PRKDC-206ENST00000536429 CCBE1Q6UXH8 406 aaPredicted RBP10.63□□□□□ -0.71
PRKDC-206ENST00000536429 GDPGP1Q6ZNW5 385 aa10.63□□□□□ -0.71
PRKDC-206ENST00000536429 CDH26Q8IXH8 852 aa10.63□□□□□ -0.71
PRKDC-206ENST00000536429 ABHD12Q8N2K0 398 aa10.63□□□□□ -0.71
PRKDC-206ENST00000536429 NKAIN3Q8N8D7 197 aa10.63□□□□□ -0.71
PRKDC-206ENST00000536429 OR4F5Q8NH21 305 aa10.63□□□□□ -0.71
PRKDC-206ENST00000536429 LINC01006Q8NI28 216 aa10.63□□□□□ -0.71
PRKDC-206ENST00000536429 RFESDQ8TAC1 157 aa10.63□□□□□ -0.71
PRKDC-206ENST00000536429 GFI1Q99684 422 aa10.63□□□□□ -0.71
PRKDC-206ENST00000536429 CLEC7AQ9BXN2 247 aa10.63□□□□□ -0.71
PRKDC-206ENST00000536429 SLITRK2Q9H156 845 aa10.63□□□□□ -0.71
PRKDC-206ENST00000536429 KCNK15Q9H427 330 aa10.63□□□□□ -0.71
PRKDC-206ENST00000536429 TCF7L1Q9HCS4 588 aa10.63□□□□□ -0.71
PRKDC-206ENST00000536429 ISYNA1Q9NPH2 558 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms