RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 PLEKHG7Q6ZR37 379 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 SHFQ7M4L6 423 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 SLC35E3Q7Z769 313 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 HAPLN4Q86UW8 402 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 ZNF573Q86YE8 665 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 CLVS1Q8IUQ0 354 aaPredicted RBP2.76□□□□□ -1.97
PTPRC-213ENST00000529828 STPG2Q8N412 459 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 C5orf56Q8N8D9 126 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 AQP11Q8NBQ7 271 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 BBS1Q8NFJ9 593 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 OR2T33Q8NG76 320 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 OR8U1Q8NH10 309 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 OTOSQ8NHW6 89 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 CHPT1Q8WUD6 406 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 ISOC1Q96CN7 298 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 PYURFQ96I23 114 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 ATP6V0BQ99437 205 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 CADM1Q9BY67 442 aaKnown RBP2.76□□□□□ -1.97
PTPRC-213ENST00000529828 PBOV1Q9GZY1 135 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 HES4Q9HCC6 221 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 ISYNA1Q9NPH2 558 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 ZFP57Q9NU63 452 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 FGFR1OP2Q9NVK5 253 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 FAM206AQ9NX38 181 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 ENPP5Q9UJA9 477 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 HHLA2Q9UM44 414 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 LINC00312Q9Y6C7 94 aa2.76□□□□□ -1.97
PTPRC-213ENST00000529828 IGKV1-27A0A075B6S5 117 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 IGHV3-72A0A0B4J1Y9 119 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 TMEM269A0A1B0GVZ9 245 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 RBMY1BA6NDE4 496 aaKnown RBP2.75□□□□□ -1.97
PTPRC-213ENST00000529828 RBMY1EA6NEQ0 496 aaKnown RBP2.75□□□□□ -1.97
PTPRC-213ENST00000529828 BUB1B-PAK6H3BSN5 160 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 M0QZK8 103 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 TNFRSF11BO00300 401 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 TOR1AO14656 332 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 SLC25A17O43808 307 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 SSX5O60225 188 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 NOS1APO75052 506 aaPredicted RBP2.75□□□□□ -1.97
PTPRC-213ENST00000529828 RBBP9O75884 186 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 JTBO76095 146 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 SNAPINO95295 136 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 CRYZL1O95825 349 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 HAND1O96004 215 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 IGLV1-47P01700 117 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 RBMY1DP0C7P1 496 aaKnown RBP2.75□□□□□ -1.97
PTPRC-213ENST00000529828 SPNP16150 400 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 NFYBP25208 207 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 PEX2P28328 305 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 MNDAP41218 407 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 OR3A1P47881 315 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 GBX2P52951 348 aaPredicted RBP2.75□□□□□ -1.97
PTPRC-213ENST00000529828 ERVK11-1P61568 191 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 RPS7P62081 194 aaKnown RBP2.75□□□□□ -1.97
PTPRC-213ENST00000529828 BDH1Q02338 343 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 MEF2CQ06413 473 aaPredicted RBP2.75□□□□□ -1.97
PTPRC-213ENST00000529828 LTC4SQ16873 150 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 ODF4Q2M2E3 257 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 HLA-DRB5Q30154 266 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 SPATS1Q496A3 300 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 RPL13AP3Q6NVV1 102 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 C8orf82Q6P1X6 216 aaPredicted RBP2.75□□□□□ -1.97
PTPRC-213ENST00000529828 ZBTB49Q6ZSB9 765 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 RASSF6Q6ZTQ3 369 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 CATSPERDQ86XM0 798 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 ZDHHC13Q8IUH4 622 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 DRAM1Q8N682 238 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 SLC24A4Q8NFF2 622 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 OR11H1Q8NG94 326 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 EMG1Q92979 244 aaKnown RBP2.75□□□□□ -1.97
PTPRC-213ENST00000529828 TOMM40LQ969M1 308 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 MCUR1Q96AQ8 359 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 RPEQ96AT9 228 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 RNFT2Q96EX2 444 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 SNX22Q96L94 193 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 LRGUKQ96M69 825 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 HOPXQ9BPY8 73 aaPredicted RBP2.75□□□□□ -1.97
PTPRC-213ENST00000529828 GHITMQ9H3K2 345 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 EDA2RQ9HAV5 297 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 CMC2Q9NRP2 79 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 RBFOX1Q9NWB1 397 aaKnown RBP2.75□□□□□ -1.97
PTPRC-213ENST00000529828 MTCH1Q9NZJ7 389 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 AP3M1Q9Y2T2 418 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 SORL1Q92673 2214 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 TRGV10A0A0A0MS01 117 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 A0A0U1RQV5 110 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 NCBP2LA6PVI3 153 aaKnown RBP2.75□□□□□ -1.97
PTPRC-213ENST00000529828 H3BN98 237 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 BET1O15155 118 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 SAP30O75446 220 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 GMNNO75496 209 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 DHRS3O75911 302 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 CCNB2O95067 398 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 IGKV1D-33P01593 117 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 IGKV1-33P01594 117 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 FAM106CPP0CH98 169 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 GLIPR1P48060 266 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 NPBWR2P48146 333 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 REG1BP48304 166 aa2.75□□□□□ -1.97
PTPRC-213ENST00000529828 GNG10P50151 68 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms