RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 NXF2Q9GZY0 626 aaKnown RBP2.27□□□□□ -2.05
PTPN12-213ENST00000519553 PARVGQ9HBI0 331 aa2.27□□□□□ -2.05
PTPN12-213ENST00000519553 CD300AQ9UGN4 299 aa2.27□□□□□ -2.05
PTPN12-213ENST00000519553 C15orf41Q9Y2V0 281 aa2.27□□□□□ -2.05
PTPN12-213ENST00000519553 A6NED7 52 aa2.26□□□□□ -2.05
PTPN12-213ENST00000519553 VAPBO95292 243 aa2.26□□□□□ -2.05
PTPN12-213ENST00000519553 SCGB1C2P0DMR2 95 aa2.26□□□□□ -2.05
PTPN12-213ENST00000519553 CCNOP22674 350 aa2.26□□□□□ -2.05
PTPN12-213ENST00000519553 CRABP2P29373 138 aa2.26□□□□□ -2.05
PTPN12-213ENST00000519553 IL12BP29460 328 aa2.26□□□□□ -2.05
PTPN12-213ENST00000519553 BNIP2Q12982 314 aa2.26□□□□□ -2.05
PTPN12-213ENST00000519553 CASP8Q14790 479 aa2.26□□□□□ -2.05
PTPN12-213ENST00000519553 GUSBP1Q15486 140 aa2.26□□□□□ -2.05
PTPN12-213ENST00000519553 PSG3Q16557 428 aa2.26□□□□□ -2.05
PTPN12-213ENST00000519553 RBM45Q8IUH3 476 aaKnown RBP2.26□□□□□ -2.05
PTPN12-213ENST00000519553 OR10D4PQ8NGN7 298 aa2.26□□□□□ -2.05
PTPN12-213ENST00000519553 OR6N2Q8NGY6 317 aa2.26□□□□□ -2.05
PTPN12-213ENST00000519553 SCGB1C1Q8TD33 95 aa2.26□□□□□ -2.05
PTPN12-213ENST00000519553 DOK4Q8TEW6 326 aa2.26□□□□□ -2.05
PTPN12-213ENST00000519553 PDCD6IPQ8WUM4 868 aaKnown RBP2.26□□□□□ -2.05
PTPN12-213ENST00000519553 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.26□□□□□ -2.05
PTPN12-213ENST00000519553 TRNT1Q96Q11 434 aaKnown RBP2.26□□□□□ -2.05
PTPN12-213ENST00000519553 OR2D2Q9H210 308 aa2.26□□□□□ -2.05
PTPN12-213ENST00000519553 SDHAF2Q9NX18 166 aa2.26□□□□□ -2.05
PTPN12-213ENST00000519553 DNAJC27Q9NZQ0 273 aa2.26□□□□□ -2.05
PTPN12-213ENST00000519553 C14orf166Q9Y224 244 aaKnown RBP2.26□□□□□ -2.05
PTPN12-213ENST00000519553 ADAMTSL3P82987 1691 aa2.25□□□□□ -2.05
PTPN12-213ENST00000519553 NRCAMQ92823 1304 aa2.25□□□□□ -2.05
PTPN12-213ENST00000519553 PDYNP01213 254 aa2.25□□□□□ -2.05
PTPN12-213ENST00000519553 OPN1SWP03999 348 aa2.25□□□□□ -2.05
PTPN12-213ENST00000519553 ZNF22P17026 224 aaPredicted RBP2.25□□□□□ -2.05
PTPN12-213ENST00000519553 PRTN3P24158 256 aa2.25□□□□□ -2.05
PTPN12-213ENST00000519553 ZNF83P51522 516 aa2.25□□□□□ -2.05
PTPN12-213ENST00000519553 XKP51811 444 aa2.25□□□□□ -2.05
PTPN12-213ENST00000519553 HS3ST5Q8IZT8 346 aa2.25□□□□□ -2.05
PTPN12-213ENST00000519553 BLNKQ8WV28 456 aa2.25□□□□□ -2.05
PTPN12-213ENST00000519553 ARL5BQ96KC2 179 aa2.25□□□□□ -2.05
PTPN12-213ENST00000519553 GLT1D1Q96MS3 346 aa2.25□□□□□ -2.05
PTPN12-213ENST00000519553 VAT1Q99536 393 aa2.25□□□□□ -2.05
PTPN12-213ENST00000519553 ANAPC13Q9BS18 74 aa2.25□□□□□ -2.05
PTPN12-213ENST00000519553 TSSK6Q9BXA6 273 aa2.25□□□□□ -2.05
PTPN12-213ENST00000519553 NRBP2Q9NSY0 501 aa2.25□□□□□ -2.05
PTPN12-213ENST00000519553 STMN3Q9NZ72 180 aa2.25□□□□□ -2.05
PTPN12-213ENST00000519553 VAPAQ9P0L0 249 aa2.25□□□□□ -2.05
PTPN12-213ENST00000519553 RBMX2Q9Y388 322 aaKnown RBP2.25□□□□□ -2.05
PTPN12-213ENST00000519553 ZNF337Q9Y3M9 751 aa2.25□□□□□ -2.05
PTPN12-213ENST00000519553 BAHCC1Q9P281 2608 aa2.25□□□□□ -2.05
PTPN12-213ENST00000519553 DOCK6Q96HP0 2047 aa2.24□□□□□ -2.05
PTPN12-213ENST00000519553 E7EWF7 191 aa2.24□□□□□ -2.05
PTPN12-213ENST00000519553 MYO1DO94832 1006 aa2.24□□□□□ -2.05
PTPN12-213ENST00000519553 CDK14O94921 469 aa2.24□□□□□ -2.05
PTPN12-213ENST00000519553 GABRA1P14867 456 aa2.24□□□□□ -2.05
PTPN12-213ENST00000519553 ELK4P28324 431 aa2.24□□□□□ -2.05
PTPN12-213ENST00000519553 TNNC1P63316 161 aa2.24□□□□□ -2.05
PTPN12-213ENST00000519553 ACTL10Q5JWF8 245 aa2.24□□□□□ -2.05
PTPN12-213ENST00000519553 RESP18Q5W5W9 173 aa2.24□□□□□ -2.05
PTPN12-213ENST00000519553 PID1Q7Z2X4 250 aa2.24□□□□□ -2.05
PTPN12-213ENST00000519553 SYS1Q8N2H4 156 aa2.24□□□□□ -2.05
PTPN12-213ENST00000519553 C17orf78Q8N4C9 275 aa2.24□□□□□ -2.05
PTPN12-213ENST00000519553 TWIST2Q8WVJ9 160 aa2.24□□□□□ -2.05
PTPN12-213ENST00000519553 OR8B2Q96RD0 313 aa2.24□□□□□ -2.05
PTPN12-213ENST00000519553 LINC01587Q99440 93 aa2.24□□□□□ -2.05
PTPN12-213ENST00000519553 LLPHQ9BRT6 129 aaKnown RBP2.24□□□□□ -2.05
PTPN12-213ENST00000519553 SYT4Q9H2B2 425 aa2.24□□□□□ -2.05
PTPN12-213ENST00000519553 NAGKQ9UJ70 344 aa2.24□□□□□ -2.05
PTPN12-213ENST00000519553 KMT2EQ8IZD2 1858 aa2.23□□□□□ -2.05
PTPN12-213ENST00000519553 GOLGA8QA0A0J9YX86 632 aa2.23□□□□□ -2.05
PTPN12-213ENST00000519553 G3V3Q6 166 aa2.23□□□□□ -2.05
PTPN12-213ENST00000519553 BGNP21810 368 aa2.23□□□□□ -2.05
PTPN12-213ENST00000519553 LAIR2Q6ISS4 152 aa2.23□□□□□ -2.05
PTPN12-213ENST00000519553 C8orf76Q96K31 380 aa2.23□□□□□ -2.05
PTPN12-213ENST00000519553 BIRC8Q96P09 236 aa2.23□□□□□ -2.05
PTPN12-213ENST00000519553 CATSPER2Q96P56 530 aa2.23□□□□□ -2.05
PTPN12-213ENST00000519553 OLFM3Q96PB7 478 aa2.23□□□□□ -2.05
PTPN12-213ENST00000519553 CYTH2Q99418 400 aa2.23□□□□□ -2.05
PTPN12-213ENST00000519553 HINT2Q9BX68 163 aa2.23□□□□□ -2.05
PTPN12-213ENST00000519553 CYB5R1Q9UHQ9 305 aa2.23□□□□□ -2.05
PTPN12-213ENST00000519553 CACNA1GO43497 2377 aa2.23□□□□□ -2.05
PTPN12-213ENST00000519553 POLR3AO14802 1390 aaPredicted RBP2.23□□□□□ -2.05
PTPN12-213ENST00000519553 IGHV1-45A0A0A0MS14 117 aa2.22□□□□□ -2.05
PTPN12-213ENST00000519553 RAB19A4D1S5 217 aa2.22□□□□□ -2.05
PTPN12-213ENST00000519553 SCN2BO60939 215 aa2.22□□□□□ -2.05
PTPN12-213ENST00000519553 ZMPSTE24O75844 475 aa2.22□□□□□ -2.05
PTPN12-213ENST00000519553 SC5DO75845 299 aa2.22□□□□□ -2.05
PTPN12-213ENST00000519553 CST4P01036 141 aa2.22□□□□□ -2.05
PTPN12-213ENST00000519553 ZNF3P17036 446 aa2.22□□□□□ -2.05
PTPN12-213ENST00000519553 CSRP1P21291 193 aaKnown RBP2.22□□□□□ -2.05
PTPN12-213ENST00000519553 COILP38432 576 aaPredicted RBP2.22□□□□□ -2.05
PTPN12-213ENST00000519553 GCLMP48507 274 aa2.22□□□□□ -2.05
PTPN12-213ENST00000519553 UBE2IP63279 158 aaKnown RBP2.22□□□□□ -2.05
PTPN12-213ENST00000519553 COTL1Q14019 142 aa2.22□□□□□ -2.05
PTPN12-213ENST00000519553 ANGPT1Q15389 498 aa2.22□□□□□ -2.05
PTPN12-213ENST00000519553 C6orf183Q5T699 404 aa2.22□□□□□ -2.05
PTPN12-213ENST00000519553 FAHD1Q6P587 224 aa2.22□□□□□ -2.05
PTPN12-213ENST00000519553 FAM9CQ8IZT9 166 aa2.22□□□□□ -2.05
PTPN12-213ENST00000519553 CCDC12Q8WUD4 166 aaPredicted RBP2.22□□□□□ -2.05
PTPN12-213ENST00000519553 CCDC124Q96CT7 223 aaKnown RBP2.22□□□□□ -2.05
PTPN12-213ENST00000519553 CPB2Q96IY4 423 aa2.22□□□□□ -2.05
PTPN12-213ENST00000519553 B9D2Q9BPU9 175 aa2.22□□□□□ -2.05
PTPN12-213ENST00000519553 PRRG3Q9BZD7 231 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms