RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 CITED1Q99966 193 aa6.96□□□□□ -1.3
PDPN-209ENST00000510906 PDCD1LG2Q9BQ51 273 aa6.96□□□□□ -1.3
PDPN-209ENST00000510906 HMG20AQ9NP66 347 aa6.96□□□□□ -1.3
PDPN-209ENST00000510906 INPP5EQ9NRR6 644 aa6.96□□□□□ -1.3
PDPN-209ENST00000510906 MRPS18AQ9NVS2 196 aaKnown RBP6.96□□□□□ -1.3
PDPN-209ENST00000510906 SMPD3Q9NY59 655 aaPredicted RBP6.96□□□□□ -1.3
PDPN-209ENST00000510906 GSTK1Q9Y2Q3 226 aa6.96□□□□□ -1.3
PDPN-209ENST00000510906 RRP15Q9Y3B9 282 aaKnown RBP6.96□□□□□ -1.3
PDPN-209ENST00000510906 FAM90A8PA6NJQ4 464 aa6.95□□□□□ -1.3
PDPN-209ENST00000510906 TMEM212A6NML5 194 aa6.95□□□□□ -1.3
PDPN-209ENST00000510906 CLPXO76031 633 aa6.95□□□□□ -1.3
PDPN-209ENST00000510906 KDM4BO94953 1096 aa6.95□□□□□ -1.3
PDPN-209ENST00000510906 CLIC3O95833 236 aa6.95□□□□□ -1.3
PDPN-209ENST00000510906 CCDC159P0C7I6 412 aa6.95□□□□□ -1.3
PDPN-209ENST00000510906 LIMS3P0CW19 117 aa6.95□□□□□ -1.3
PDPN-209ENST00000510906 LIMS4P0CW20 117 aa6.95□□□□□ -1.3
PDPN-209ENST00000510906 IGHV1-8P0DP01 117 aa6.95□□□□□ -1.3
PDPN-209ENST00000510906 TGFBR2P37173 567 aa6.95□□□□□ -1.3
PDPN-209ENST00000510906 OR3A1P47881 315 aa6.95□□□□□ -1.3
PDPN-209ENST00000510906 GTF2A1P52655 376 aaPredicted RBP6.95□□□□□ -1.3
PDPN-209ENST00000510906 GBX2P52951 348 aaPredicted RBP6.95□□□□□ -1.3
PDPN-209ENST00000510906 MEF2CQ06413 473 aaPredicted RBP6.95□□□□□ -1.3
PDPN-209ENST00000510906 ZNF146Q15072 292 aa6.95□□□□□ -1.3
PDPN-209ENST00000510906 LRRC36Q1X8D7 754 aa6.95□□□□□ -1.3
PDPN-209ENST00000510906 KLHL22Q53GT1 634 aa6.95□□□□□ -1.3
PDPN-209ENST00000510906 PLA1AQ53H76 456 aa6.95□□□□□ -1.3
PDPN-209ENST00000510906 SPIN3Q5JUX0 258 aa6.95□□□□□ -1.3
PDPN-209ENST00000510906 LDLRAD2Q5SZI1 272 aa6.95□□□□□ -1.3
PDPN-209ENST00000510906 XAF1Q6GPH4 301 aa6.95□□□□□ -1.3
PDPN-209ENST00000510906 SLC35E4Q6ICL7 350 aa6.95□□□□□ -1.3
PDPN-209ENST00000510906 DYNAPQ8N1N2 210 aa6.95□□□□□ -1.3
PDPN-209ENST00000510906 ZNF555Q8NEP9 628 aa6.95□□□□□ -1.3
PDPN-209ENST00000510906 OR5AK2Q8NH90 309 aa6.95□□□□□ -1.3
PDPN-209ENST00000510906 CNIH3Q8TBE1 160 aa6.95□□□□□ -1.3
PDPN-209ENST00000510906 PIFOQ8TCI5 191 aa6.95□□□□□ -1.3
PDPN-209ENST00000510906 RGP1Q92546 391 aaPredicted RBP6.95□□□□□ -1.3
PDPN-209ENST00000510906 STMN2Q93045 179 aa6.95□□□□□ -1.3
PDPN-209ENST00000510906 ZNF714Q96N38 554 aa6.95□□□□□ -1.3
PDPN-209ENST00000510906 OR14A2Q96R54 314 aa6.95□□□□□ -1.3
PDPN-209ENST00000510906 ZCCHC4Q9H5U6 513 aa6.95□□□□□ -1.3
PDPN-209ENST00000510906 C16orf95Q9H693 158 aa6.95□□□□□ -1.3
PDPN-209ENST00000510906 SEBOXQ9HB31 216 aaPredicted RBP6.95□□□□□ -1.3
PDPN-209ENST00000510906 NEK6Q9HC98 313 aa6.95□□□□□ -1.3
PDPN-209ENST00000510906 SIGLEC9Q9Y336 463 aa6.95□□□□□ -1.3
PDPN-209ENST00000510906 RPL36Q9Y3U8 105 aaKnown RBP6.95□□□□□ -1.3
PDPN-209ENST00000510906 hADV38S2A0JD32 116 aa6.94□□□□□ -1.3
PDPN-209ENST00000510906 ODF3BA8MYP8 253 aa6.94□□□□□ -1.3
PDPN-209ENST00000510906 MGST3O14880 152 aa6.94□□□□□ -1.3
PDPN-209ENST00000510906 SULT1B1O43704 296 aa6.94□□□□□ -1.3
PDPN-209ENST00000510906 CHST1O43916 411 aa6.94□□□□□ -1.3
PDPN-209ENST00000510906 MMP23AO75900 390 aa6.94□□□□□ -1.3
PDPN-209ENST00000510906 OR2H2O95918 312 aa6.94□□□□□ -1.3
PDPN-209ENST00000510906 RBP4P02753 201 aa6.94□□□□□ -1.3
PDPN-209ENST00000510906 ARG1P05089 322 aa6.94□□□□□ -1.3
PDPN-209ENST00000510906 HCKP08631 526 aa6.94□□□□□ -1.3
PDPN-209ENST00000510906 SOX2P48431 317 aa6.94□□□□□ -1.3
PDPN-209ENST00000510906 ETV1P50549 477 aa6.94□□□□□ -1.3
PDPN-209ENST00000510906 RAB13P51153 203 aa6.94□□□□□ -1.3
PDPN-209ENST00000510906 P2RX3P56373 397 aa6.94□□□□□ -1.3
PDPN-209ENST00000510906 ZP1P60852 638 aa6.94□□□□□ -1.3
PDPN-209ENST00000510906 MRPL28Q13084 256 aaKnown RBP6.94□□□□□ -1.3
PDPN-209ENST00000510906 DYNC1I2Q13409 638 aaKnown RBP6.94□□□□□ -1.3
PDPN-209ENST00000510906 IL18R1Q13478 541 aa6.94□□□□□ -1.3
PDPN-209ENST00000510906 KISS1Q15726 138 aa6.94□□□□□ -1.3
PDPN-209ENST00000510906 AANATQ16613 207 aa6.94□□□□□ -1.3
PDPN-209ENST00000510906 TMEM95Q3KNT9 176 aa6.94□□□□□ -1.3
PDPN-209ENST00000510906 OR2G6Q5TZ20 316 aa6.94□□□□□ -1.3
PDPN-209ENST00000510906 ZNF691Q5VV52 312 aa6.94□□□□□ -1.3
PDPN-209ENST00000510906 LPCAT4Q643R3 524 aa6.94□□□□□ -1.3
PDPN-209ENST00000510906 ZNF626Q68DY1 528 aa6.94□□□□□ -1.3
PDPN-209ENST00000510906 ASPHD2Q6ICH7 369 aa6.94□□□□□ -1.3
PDPN-209ENST00000510906 SERPINA12Q8IW75 414 aa6.94□□□□□ -1.3
PDPN-209ENST00000510906 PARP16Q8N5Y8 322 aa6.94□□□□□ -1.3
PDPN-209ENST00000510906 OR11H6Q8NGC7 330 aa6.94□□□□□ -1.3
PDPN-209ENST00000510906 OR51A2Q8NGJ7 313 aa6.94□□□□□ -1.3
PDPN-209ENST00000510906 OR13D1Q8NGV5 346 aa6.94□□□□□ -1.3
PDPN-209ENST00000510906 TSEN15Q8WW01 171 aaKnown RBP6.94□□□□□ -1.3
PDPN-209ENST00000510906 CYGBQ8WWM9 190 aa6.94□□□□□ -1.3
PDPN-209ENST00000510906 RDH12Q96NR8 316 aa6.94□□□□□ -1.3
PDPN-209ENST00000510906 MYCBPQ99417 103 aaPredicted RBP6.94□□□□□ -1.3
PDPN-209ENST00000510906 NKX3-1Q99801 234 aaPredicted RBP6.94□□□□□ -1.3
PDPN-209ENST00000510906 COMMD4Q9H0A8 199 aa6.94□□□□□ -1.3
PDPN-209ENST00000510906 FGF20Q9NP95 211 aaPredicted RBP6.94□□□□□ -1.3
PDPN-209ENST00000510906 EXOSC4Q9NPD3 245 aaKnown RBP6.94□□□□□ -1.3
PDPN-209ENST00000510906 DHDHQ9UQ10 334 aa6.94□□□□□ -1.3
PDPN-209ENST00000510906 LINC00312Q9Y6C7 94 aa6.94□□□□□ -1.3
PDPN-209ENST00000510906 SH2D1BO14796 132 aa6.93□□□□□ -1.3
PDPN-209ENST00000510906 TMEM225BP0DP42 221 aa6.93□□□□□ -1.3
PDPN-209ENST00000510906 ZNF44P15621 663 aa6.93□□□□□ -1.3
PDPN-209ENST00000510906 GCSHP23434 173 aa6.93□□□□□ -1.3
PDPN-209ENST00000510906 GABRA5P31644 462 aa6.93□□□□□ -1.3
PDPN-209ENST00000510906 GLIPR1P48060 266 aa6.93□□□□□ -1.3
PDPN-209ENST00000510906 PTTG1IPP53801 180 aa6.93□□□□□ -1.3
PDPN-209ENST00000510906 UCP3P55916 312 aa6.93□□□□□ -1.3
PDPN-209ENST00000510906 SCN1BQ07699 218 aa6.93□□□□□ -1.3
PDPN-209ENST00000510906 AESQ08117 197 aa6.93□□□□□ -1.3
PDPN-209ENST00000510906 CDK5R1Q15078 307 aa6.93□□□□□ -1.3
PDPN-209ENST00000510906 RCN1Q15293 331 aa6.93□□□□□ -1.3
PDPN-209ENST00000510906 FAM189A2Q15884 450 aa6.93□□□□□ -1.3
PDPN-209ENST00000510906 SSX2Q16385 188 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms