RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 HMGB3O15347 200 aaKnown RBP3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 NDUFS5O43920 106 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 SULT1C4O75897 302 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 DHRS3O75911 302 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 C1QCP02747 245 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 TTRP02766 147 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 ATP5G1P05496 136 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 PRSS1P07477 247 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 ERGP11308 486 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 IGHV1-2P23083 117 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 DNAJB13P59910 316 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 CKS1BP61024 79 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 HSPE1P61604 102 aaKnown RBP3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 PMAIP1Q13794 54 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 AVPI1Q5T686 147 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 FBXW9Q5XUX1 488 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 NANOGP8Q6NSW7 305 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 LPCAT3Q6P1A2 487 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 TBPL2Q6SJ96 375 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 REG3GQ6UW15 175 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 TOMM20LQ6UXN7 152 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 GDPGP1Q6ZNW5 385 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 TCF24Q7RTU0 167 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 ZNF550Q7Z398 422 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 RAB42Q8N4Z0 105 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 ZNRF2Q8NHG8 242 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 IL22RA2Q969J5 263 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 FAM3DQ96BQ1 224 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 SPACA5Q96QH8 159 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 CDX2Q99626 313 aaPredicted RBP3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 EBF4Q9BQW3 602 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 RSPO3Q9BXY4 272 aaPredicted RBP3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 MAP1LC3BQ9GZQ8 125 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 RNASE7Q9H1E1 156 aaKnown RBP3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 PANK3Q9H999 370 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 NANOGQ9H9S0 305 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 MRPL27Q9P0M9 148 aaKnown RBP3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 SHPKQ9UHJ6 478 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 PYCARDQ9ULZ3 195 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 ZNF780BQ9Y6R6 833 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 MRC2Q9UBG0 1479 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 CKAP5Q14008 2032 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 DHX57Q6P158 1386 aaKnown RBP3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 ASTN1O14525 1302 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 NOTCH3Q9UM47 2321 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 IGHV4-4A0A075B6R2 117 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 TRAV8-2A0A0B4J237 113 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 OR5H1A6NKK0 313 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 FOXI3A8MTJ6 420 aaPredicted RBP3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 I3L4J1 428 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 SLC17A3O00476 420 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 AGPAT2O15120 278 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 ARL6IP5O75915 188 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 PDYNP01213 254 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 C1QBP02746 253 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 BPGMP07738 259 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 OR8U8P0C7N1 319 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 COX4I1P13073 169 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 FOLR2P14207 255 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 PRTN3P24158 256 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 AGTR1P30556 359 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 SPRP35270 261 aaPredicted RBP3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 GLRXP35754 106 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 MAP2K4P45985 399 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 MARCKSL1P49006 195 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 RPL34P49207 117 aaKnown RBP3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 NDUFV3P56181 108 aaKnown RBP3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 H2BFSP57053 126 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 SELENOTP62341 195 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 DEFA6Q01524 100 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 PRDX4Q13162 271 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 C1DQ13901 141 aaKnown RBP3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 SLC10A1Q14973 349 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 QPRTQ15274 297 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 GSG1Q2KHT4 349 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 PLPPR5Q32ZL2 321 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 CNPY1Q3B7I2 92 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 SLC25A30Q5SVS4 291 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 TMEM236Q5W0B7 351 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 C9orf57Q5W0N0 161 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 LCN12Q6JVE5 192 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 KRTAP5-4Q6L8H1 288 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 UGT2A3Q6UWM9 527 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 CXCL17Q6UXB2 119 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 UNQ9370/PRO34162Q6UXP9 181 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 TMPPEQ6ZT21 453 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 LINC00173Q6ZV60 143 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 C6orf120Q7Z4R8 191 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 DOLPP1Q86YN1 238 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 UMODL1-AS1Q8N2C9 162 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 CIARTQ8N365 385 aaPredicted RBP3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 SLC35G3Q8N808 338 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 OR9Q1Q8NGQ5 310 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 OR9G1Q8NH87 305 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 DNAJC9Q8WXX5 260 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 CCL17Q92583 94 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 TAF15Q92804 592 aaKnown RBP eCLIP3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 GHSRQ92847 366 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 BORCS7Q96B45 105 aa3.29□□□□□ -1.88
SMARCA5-202ENST00000508573 ACY3Q96HD9 319 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms